RNA–Protein interactions for RNA: ENST00000260563.4

RTCA-201, Transcript of RNA 3'-terminal phosphate cyclase, humanhuman

TSL 1 (best) BASIC

Gene RTCA, Length 1,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCA-201ENST00000260563 SYCP1Q15431 976 aa22.27■■□□□ 1.16
RTCA-201ENST00000260563 CBWD6Q4V339 395 aa22.27■■□□□ 1.16
RTCA-201ENST00000260563 CBWD3Q5JTY5 395 aa22.27■■□□□ 1.16
RTCA-201ENST00000260563 CBWD5Q5RIA9 395 aa22.27■■□□□ 1.16
RTCA-201ENST00000260563 ZNF697Q5TEC3 545 aa22.27■■□□□ 1.16
RTCA-201ENST00000260563 C3orf58Q8NDZ4 430 aa22.27■■□□□ 1.16
RTCA-201ENST00000260563 NUB1Q9Y5A7 615 aa22.27■■□□□ 1.16
RTCA-201ENST00000260563 PIRO00625 290 aa22.26■■□□□ 1.15
RTCA-201ENST00000260563 PPEF2O14830 753 aa22.26■■□□□ 1.15
RTCA-201ENST00000260563 TADA2AO75478 443 aa22.26■■□□□ 1.15
RTCA-201ENST00000260563 C4BPAP04003 597 aaKnown RBP22.26■■□□□ 1.15
RTCA-201ENST00000260563 ITGB1P05556 798 aa22.26■■□□□ 1.15
RTCA-201ENST00000260563 RBP5P82980 135 aa22.26■■□□□ 1.15
RTCA-201ENST00000260563 TRPC3Q13507 836 aa22.26■■□□□ 1.15
RTCA-201ENST00000260563 ZACNQ401N2 412 aa22.26■■□□□ 1.15
RTCA-201ENST00000260563 KRT39Q6A163 491 aa22.26■■□□□ 1.15
RTCA-201ENST00000260563 SV2AQ7L0J3 742 aa22.26■■□□□ 1.15
RTCA-201ENST00000260563 BCL7CQ8WUZ0 217 aaPredicted RBP22.26■■□□□ 1.15
RTCA-201ENST00000260563 SIX4Q9UIU6 781 aa22.26■■□□□ 1.15
RTCA-201ENST00000260563 AGAP1Q9UPQ3 857 aa22.26■■□□□ 1.15
RTCA-201ENST00000260563 SF3B1O75533 1304 aaKnown RBP eCLIP22.26■■□□□ 1.15
RTCA-201ENST00000260563 GTPBP10A4D1E9 387 aaKnown RBP22.26■■□□□ 1.15
RTCA-201ENST00000260563 P4HA2O15460 535 aa22.26■■□□□ 1.15
RTCA-201ENST00000260563 PNPLA4P41247 253 aa22.26■■□□□ 1.15
RTCA-201ENST00000260563 TAF6P49848 677 aa22.26■■□□□ 1.15
RTCA-201ENST00000260563 MYL7Q01449 175 aa22.26■■□□□ 1.15
RTCA-201ENST00000260563 PLCB3Q01970 1234 aa22.26■■□□□ 1.15
RTCA-201ENST00000260563 KRT17Q04695 432 aa22.26■■□□□ 1.15
RTCA-201ENST00000260563 KCNMA1Q12791 1236 aa22.26■■□□□ 1.15
RTCA-201ENST00000260563 FUT10Q6P4F1 479 aa22.26■■□□□ 1.15
RTCA-201ENST00000260563 LRRC52Q8N7C0 313 aa22.26■■□□□ 1.15
RTCA-201ENST00000260563 CXorf38Q8TB03 319 aa22.26■■□□□ 1.15
RTCA-201ENST00000260563 PCMTD1Q96MG8 357 aaPredicted RBP22.26■■□□□ 1.15
RTCA-201ENST00000260563 MYO9BQ13459 2157 aa22.26■■□□□ 1.15
RTCA-201ENST00000260563 PMM2O15305 246 aa22.25■■□□□ 1.15
RTCA-201ENST00000260563 CLSTN1O94985 981 aa22.25■■□□□ 1.15
RTCA-201ENST00000260563 DEKP35659 375 aaKnown RBP22.25■■□□□ 1.15
RTCA-201ENST00000260563 PIK3CAP42336 1068 aa22.25■■□□□ 1.15
RTCA-201ENST00000260563 CETN1Q12798 172 aa22.25■■□□□ 1.15
RTCA-201ENST00000260563 GPM6BQ13491 265 aa22.25■■□□□ 1.15
RTCA-201ENST00000260563 SV2CQ496J9 727 aa22.25■■□□□ 1.15
RTCA-201ENST00000260563 GBP6Q6ZN66 633 aa22.25■■□□□ 1.15
RTCA-201ENST00000260563 C15orf39Q6ZRI6 1047 aa22.25■■□□□ 1.15
RTCA-201ENST00000260563 STK39Q9UEW8 545 aa22.25■■□□□ 1.15
RTCA-201ENST00000260563 SIK3Q9Y2K2 1263 aa22.25■■□□□ 1.15
RTCA-201ENST00000260563 H3BNC9 293 aa22.24■■□□□ 1.15
RTCA-201ENST00000260563 TRAPPC3O43617 180 aa22.24■■□□□ 1.15
RTCA-201ENST00000260563 KLK7P49862 253 aa22.24■■□□□ 1.15
RTCA-201ENST00000260563 ELAVL2Q12926 359 aaKnown RBP22.24■■□□□ 1.15
RTCA-201ENST00000260563 MYO1EQ12965 1108 aa22.24■■□□□ 1.15
RTCA-201ENST00000260563 NCOA4Q13772 614 aa22.24■■□□□ 1.15
RTCA-201ENST00000260563 EXOC3L4Q17RC7 722 aa22.24■■□□□ 1.15
RTCA-201ENST00000260563 GDPD5Q8WTR4 605 aa22.24■■□□□ 1.15
RTCA-201ENST00000260563 CRACR2AQ9BSW2 395 aa22.24■■□□□ 1.15
RTCA-201ENST00000260563 TTYH1Q9H313 450 aaPredicted RBP22.24■■□□□ 1.15
RTCA-201ENST00000260563 ALG13Q9NP73 1137 aaKnown RBP22.24■■□□□ 1.15
RTCA-201ENST00000260563 IMPACTQ9P2X3 320 aa22.24■■□□□ 1.15
RTCA-201ENST00000260563 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP22.24■■□□□ 1.15
RTCA-201ENST00000260563 PAX3P23760 479 aa22.23■■□□□ 1.15
RTCA-201ENST00000260563 IGFBP6P24592 240 aaPredicted RBP22.23■■□□□ 1.15
RTCA-201ENST00000260563 BRCC3P46736 316 aa22.23■■□□□ 1.15
RTCA-201ENST00000260563 LILRA4P59901 499 aa22.23■■□□□ 1.15
RTCA-201ENST00000260563 UBE3AQ05086 875 aa22.23■■□□□ 1.15
RTCA-201ENST00000260563 CD300LGQ6UXG3 332 aa22.23■■□□□ 1.15
RTCA-201ENST00000260563 DDX53Q86TM3 631 aaKnown RBP22.23■■□□□ 1.15
RTCA-201ENST00000260563 GCNT4Q9P109 453 aa22.23■■□□□ 1.15
RTCA-201ENST00000260563 PUF60Q9UHX1 559 aaKnown RBP22.23■■□□□ 1.15
RTCA-201ENST00000260563 LZTS1Q9Y250 596 aa22.23■■□□□ 1.15
RTCA-201ENST00000260563 EPOPA6NHQ4 379 aa22.22■■□□□ 1.15
RTCA-201ENST00000260563 GOLGA6L6A8MZA4 724 aa22.22■■□□□ 1.15
RTCA-201ENST00000260563 VNN1O95497 513 aa22.22■■□□□ 1.15
RTCA-201ENST00000260563 CST3P01034 146 aaPredicted RBP22.22■■□□□ 1.15
RTCA-201ENST00000260563 HLA-DRAP01903 254 aa22.22■■□□□ 1.15
RTCA-201ENST00000260563 SCARA3Q6AZY7 606 aa22.22■■□□□ 1.15
RTCA-201ENST00000260563 GPR153Q6NV75 609 aa22.22■■□□□ 1.15
RTCA-201ENST00000260563 FBXL13Q8NEE6 735 aa22.22■■□□□ 1.15
RTCA-201ENST00000260563 TAS1R2Q8TE23 839 aa22.22■■□□□ 1.15
RTCA-201ENST00000260563 HPDLQ96IR7 371 aa22.22■■□□□ 1.15
RTCA-201ENST00000260563 NUP58Q9BVL2 599 aa22.22■■□□□ 1.15
RTCA-201ENST00000260563 IMPG2Q9BZV3 1241 aa22.22■■□□□ 1.15
RTCA-201ENST00000260563 SOD2P04179 222 aa22.21■■□□□ 1.15
RTCA-201ENST00000260563 SLC9A1P19634 815 aa22.21■■□□□ 1.15
RTCA-201ENST00000260563 PON1P27169 355 aa22.21■■□□□ 1.15
RTCA-201ENST00000260563 ATICP31939 592 aa22.21■■□□□ 1.15
RTCA-201ENST00000260563 AARSP49588 968 aaKnown RBP eCLIP22.21■■□□□ 1.15
RTCA-201ENST00000260563 TBX2Q13207 712 aaPredicted RBP22.21■■□□□ 1.15
RTCA-201ENST00000260563 ZNF699Q32M78 642 aa22.21■■□□□ 1.15
RTCA-201ENST00000260563 TIGD5Q53EQ6 642 aa22.21■■□□□ 1.15
RTCA-201ENST00000260563 DSTYKQ6XUX3 929 aa22.21■■□□□ 1.15
RTCA-201ENST00000260563 SPPL3Q8TCT6 385 aa22.21■■□□□ 1.15
RTCA-201ENST00000260563 POF1BQ8WVV4 589 aa22.21■■□□□ 1.15
RTCA-201ENST00000260563 HERC2P3Q9BVR0 1158 aa22.21■■□□□ 1.15
RTCA-201ENST00000260563 LSM14BQ9BX40 385 aaKnown RBP22.21■■□□□ 1.15
RTCA-201ENST00000260563 VN1R3Q9BXE9 311 aa22.21■■□□□ 1.15
RTCA-201ENST00000260563 GPR62Q9BZJ7 368 aa22.21■■□□□ 1.15
RTCA-201ENST00000260563 COQ4Q9Y3A0 265 aa22.21■■□□□ 1.15
RTCA-201ENST00000260563 SZT2Q5T011 3432 aa22.21■■□□□ 1.15
RTCA-201ENST00000260563 KPNA7A9QM74 516 aa22.21■■□□□ 1.15
RTCA-201ENST00000260563 I3L4J1 428 aa22.21■■□□□ 1.15
RTCA-201ENST00000260563 GRM6O15303 877 aa22.21■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms