RNA–Protein interactions for RNA: ENST00000260327.8

CTDSPL2-201, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 6,828 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-201ENST00000260327 PREPLQ4J6C6 727 aaPredicted RBP10.23□□□□□ -0.77
CTDSPL2-201ENST00000260327 HEATR6Q6AI08 1181 aaKnown RBP10.23□□□□□ -0.77
CTDSPL2-201ENST00000260327 ILDR1Q86SU0 546 aaPredicted RBP10.23□□□□□ -0.77
CTDSPL2-201ENST00000260327 OR9Q1Q8NGQ5 310 aa10.23□□□□□ -0.77
CTDSPL2-201ENST00000260327 FAM111AQ96PZ2 611 aa10.23□□□□□ -0.77
CTDSPL2-201ENST00000260327 SEL1LQ9UBV2 794 aa10.23□□□□□ -0.77
CTDSPL2-201ENST00000260327 CHD1O14646 1710 aa10.22□□□□□ -0.77
CTDSPL2-201ENST00000260327 NPHP4O75161 1426 aaPredicted RBP10.22□□□□□ -0.77
CTDSPL2-201ENST00000260327 C16orf96A6NNT2 1141 aa10.22□□□□□ -0.77
CTDSPL2-201ENST00000260327 ZSCAN9O15535 394 aaPredicted RBP10.22□□□□□ -0.77
CTDSPL2-201ENST00000260327 SNX2O60749 519 aa10.22□□□□□ -0.77
CTDSPL2-201ENST00000260327 EYA4O95677 639 aa10.22□□□□□ -0.77
CTDSPL2-201ENST00000260327 FAM153BP0C7A2 387 aa10.22□□□□□ -0.77
CTDSPL2-201ENST00000260327 NUDT2P50583 147 aa10.22□□□□□ -0.77
CTDSPL2-201ENST00000260327 ALDH5A1P51649 535 aaPredicted RBP10.22□□□□□ -0.77
CTDSPL2-201ENST00000260327 TRIM28Q13263 835 aaKnown RBP10.22□□□□□ -0.77
CTDSPL2-201ENST00000260327 FAM153CQ494X1 144 aa10.22□□□□□ -0.77
CTDSPL2-201ENST00000260327 HAUS6Q7Z4H7 955 aa10.22□□□□□ -0.77
CTDSPL2-201ENST00000260327 TMEM165Q9HC07 324 aa10.22□□□□□ -0.77
CTDSPL2-201ENST00000260327 SYNDIG1LA6NDD5 238 aa10.22□□□□□ -0.77
CTDSPL2-201ENST00000260327 WEE2P0C1S8 567 aa10.22□□□□□ -0.77
CTDSPL2-201ENST00000260327 QARSP47897 775 aaKnown RBP10.22□□□□□ -0.77
CTDSPL2-201ENST00000260327 COPAP53621 1224 aa10.22□□□□□ -0.77
CTDSPL2-201ENST00000260327 BCAR1P56945 870 aa10.22□□□□□ -0.77
CTDSPL2-201ENST00000260327 FAM160B2Q86V87 743 aa10.22□□□□□ -0.77
CTDSPL2-201ENST00000260327 TTC8Q8TAM2 541 aa10.22□□□□□ -0.77
CTDSPL2-201ENST00000260327 SCG3Q8WXD2 468 aaKnown RBP10.22□□□□□ -0.77
CTDSPL2-201ENST00000260327 E2F7Q96AV8 911 aa10.22□□□□□ -0.77
CTDSPL2-201ENST00000260327 MOV10L1Q9BXT6 1211 aaKnown RBP10.22□□□□□ -0.77
CTDSPL2-201ENST00000260327 COA1Q9GZY4 146 aa10.22□□□□□ -0.77
CTDSPL2-201ENST00000260327 IQGAP1P46940 1657 aa10.22□□□□□ -0.77
CTDSPL2-201ENST00000260327 TBC1D4O60343 1298 aa10.22□□□□□ -0.77
CTDSPL2-201ENST00000260327 FSBPO95073 299 aa10.22□□□□□ -0.77
CTDSPL2-201ENST00000260327 FRA10AC1Q70Z53 315 aa10.22□□□□□ -0.77
CTDSPL2-201ENST00000260327 OR6B3Q8NGW1 331 aa10.22□□□□□ -0.77
CTDSPL2-201ENST00000260327 TPCN2Q8NHX9 752 aa10.22□□□□□ -0.77
CTDSPL2-201ENST00000260327 PAWRQ96IZ0 340 aaKnown RBP10.22□□□□□ -0.77
CTDSPL2-201ENST00000260327 MAGEB18Q96M61 343 aa10.22□□□□□ -0.77
CTDSPL2-201ENST00000260327 CAMSAP1Q5T5Y3 1602 aa10.22□□□□□ -0.77
CTDSPL2-201ENST00000260327 KCNN4O15554 427 aa10.22□□□□□ -0.77
CTDSPL2-201ENST00000260327 LDHAP00338 332 aaKnown RBP10.22□□□□□ -0.77
CTDSPL2-201ENST00000260327 P4HBP07237 508 aaKnown RBP10.22□□□□□ -0.77
CTDSPL2-201ENST00000260327 PAMP19021 973 aa10.22□□□□□ -0.77
CTDSPL2-201ENST00000260327 CLK1P49759 484 aaKnown RBP10.22□□□□□ -0.77
CTDSPL2-201ENST00000260327 NT5C2P49902 561 aa10.22□□□□□ -0.77
CTDSPL2-201ENST00000260327 DEPDC1Q5TB30 811 aa10.22□□□□□ -0.77
CTDSPL2-201ENST00000260327 SNX30Q5VWJ9 437 aa10.22□□□□□ -0.77
CTDSPL2-201ENST00000260327 SZRD1Q7Z422 152 aa10.22□□□□□ -0.77
CTDSPL2-201ENST00000260327 HACE1Q8IYU2 909 aa10.22□□□□□ -0.77
CTDSPL2-201ENST00000260327 DCUN1D5Q9BTE7 237 aa10.22□□□□□ -0.77
CTDSPL2-201ENST00000260327 CSF1RP07333 972 aa10.22□□□□□ -0.77
CTDSPL2-201ENST00000260327 APRTP07741 180 aa10.22□□□□□ -0.77
CTDSPL2-201ENST00000260327 TBL3Q12788 808 aaKnown RBP10.22□□□□□ -0.77
CTDSPL2-201ENST00000260327 IMPG1Q17R60 797 aa10.22□□□□□ -0.77
CTDSPL2-201ENST00000260327 KLHDC7AQ5VTJ3 777 aa10.22□□□□□ -0.77
CTDSPL2-201ENST00000260327 SYDE1Q6ZW31 735 aaPredicted RBP10.22□□□□□ -0.77
CTDSPL2-201ENST00000260327 TAGAPQ8N103 731 aa10.22□□□□□ -0.77
CTDSPL2-201ENST00000260327 CDHR1Q96JP9 859 aa10.22□□□□□ -0.77
CTDSPL2-201ENST00000260327 SERPINB12Q96P63 405 aa10.22□□□□□ -0.77
CTDSPL2-201ENST00000260327 PLA2G12BQ9BX93 195 aa10.22□□□□□ -0.77
CTDSPL2-201ENST00000260327 UBAP1Q9NZ09 502 aa10.22□□□□□ -0.77
CTDSPL2-201ENST00000260327 ZC3H7BQ9UGR2 993 aaKnown RBP10.22□□□□□ -0.77
CTDSPL2-201ENST00000260327 MAP2P11137 1827 aaKnown RBP10.22□□□□□ -0.77
CTDSPL2-201ENST00000260327 GHRP10912 638 aa10.21□□□□□ -0.77
CTDSPL2-201ENST00000260327 PSMC3P17980 439 aa10.21□□□□□ -0.77
CTDSPL2-201ENST00000260327 COILP38432 576 aaPredicted RBP10.21□□□□□ -0.77
CTDSPL2-201ENST00000260327 CDH6P55285 790 aa10.21□□□□□ -0.77
CTDSPL2-201ENST00000260327 EPC2Q52LR7 807 aa10.21□□□□□ -0.77
CTDSPL2-201ENST00000260327 CNDP1Q96KN2 507 aa10.21□□□□□ -0.77
CTDSPL2-201ENST00000260327 FSD1LQ9BXM9 530 aa10.21□□□□□ -0.77
CTDSPL2-201ENST00000260327 RXFP1Q9HBX9 757 aa10.21□□□□□ -0.77
CTDSPL2-201ENST00000260327 SARS2Q9NP81 518 aaKnown RBP10.21□□□□□ -0.77
CTDSPL2-201ENST00000260327 GABBR1Q9UBS5 961 aa10.21□□□□□ -0.77
CTDSPL2-201ENST00000260327 ASAP2O43150 1006 aa10.21□□□□□ -0.77
CTDSPL2-201ENST00000260327 TSC22D2O75157 780 aa10.21□□□□□ -0.77
CTDSPL2-201ENST00000260327 MYL2P10916 166 aa10.21□□□□□ -0.77
CTDSPL2-201ENST00000260327 ADARP55265 1226 aaKnown RBP10.21□□□□□ -0.77
CTDSPL2-201ENST00000260327 DEFA1P59665 94 aa10.21□□□□□ -0.77
CTDSPL2-201ENST00000260327 DEFA3P59666 94 aa10.21□□□□□ -0.77
CTDSPL2-201ENST00000260327 COBLL1Q53SF7 1204 aa10.21□□□□□ -0.77
CTDSPL2-201ENST00000260327 SWSAP1Q6NVH7 229 aa10.21□□□□□ -0.77
CTDSPL2-201ENST00000260327 RBBP8NLQ8NC74 664 aaPredicted RBP10.21□□□□□ -0.77
CTDSPL2-201ENST00000260327 DDI1Q8WTU0 396 aa10.21□□□□□ -0.77
CTDSPL2-201ENST00000260327 OMA1Q96E52 524 aa10.21□□□□□ -0.77
CTDSPL2-201ENST00000260327 VPS50Q96JG6 964 aa10.21□□□□□ -0.77
CTDSPL2-201ENST00000260327 KLHL4Q9C0H6 718 aa10.21□□□□□ -0.77
CTDSPL2-201ENST00000260327 RUBCNLQ9H714 662 aa10.21□□□□□ -0.77
CTDSPL2-201ENST00000260327 CAB39Q9Y376 341 aaPredicted RBP10.21□□□□□ -0.77
CTDSPL2-201ENST00000260327 COL15A1P39059 1388 aa10.21□□□□□ -0.77
CTDSPL2-201ENST00000260327 SRP72O76094 671 aaKnown RBP10.21□□□□□ -0.77
CTDSPL2-201ENST00000260327 EPHB2P29323 1055 aa10.21□□□□□ -0.77
CTDSPL2-201ENST00000260327 JAK3P52333 1124 aa10.21□□□□□ -0.77
CTDSPL2-201ENST00000260327 MICU2Q8IYU8 434 aa10.21□□□□□ -0.77
CTDSPL2-201ENST00000260327 RPS6KC1Q96S38 1066 aa10.21□□□□□ -0.77
CTDSPL2-201ENST00000260327 GCOM2Q9BZD3 368 aaPredicted RBP10.21□□□□□ -0.77
CTDSPL2-201ENST00000260327 PAIP1Q9H074 479 aaKnown RBP10.21□□□□□ -0.77
CTDSPL2-201ENST00000260327 EXOSC4Q9NPD3 245 aaKnown RBP10.21□□□□□ -0.77
CTDSPL2-201ENST00000260327 STRNO43815 780 aa10.21□□□□□ -0.78
CTDSPL2-201ENST00000260327 RBBP7Q16576 425 aa10.21□□□□□ -0.78
CTDSPL2-201ENST00000260327 CDKAL1Q5VV42 579 aa10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms