RNA–Protein interactions for RNA: ENST00000260054.8

CCDC90B-201, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 1,688 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-201ENST00000260054 ARHGEF19Q8IW93 802 aa16.98■□□□□ 0.31
CCDC90B-201ENST00000260054 TDHQ8IZJ6 230 aa16.98■□□□□ 0.31
CCDC90B-201ENST00000260054 FIBCD1Q8N539 461 aa16.98■□□□□ 0.31
CCDC90B-201ENST00000260054 PCMTD1Q96MG8 357 aaPredicted RBP16.98■□□□□ 0.31
CCDC90B-201ENST00000260054 NT5C1BQ96P26 610 aa16.98■□□□□ 0.31
CCDC90B-201ENST00000260054 PLCB1Q9NQ66 1216 aa16.98■□□□□ 0.31
CCDC90B-201ENST00000260054 MARCH5Q9NX47 278 aa16.98■□□□□ 0.31
CCDC90B-201ENST00000260054 FAN1Q9Y2M0 1017 aa16.98■□□□□ 0.31
CCDC90B-201ENST00000260054 KPNA7A9QM74 516 aa16.97■□□□□ 0.31
CCDC90B-201ENST00000260054 TMEM189-UBE2V1I3L0A0 370 aa16.97■□□□□ 0.31
CCDC90B-201ENST00000260054 KLHDC7AQ5VTJ3 777 aa16.97■□□□□ 0.31
CCDC90B-201ENST00000260054 CCDC150Q8NCX0 1101 aa16.97■□□□□ 0.31
CCDC90B-201ENST00000260054 BCL7CQ8WUZ0 217 aaPredicted RBP16.97■□□□□ 0.31
CCDC90B-201ENST00000260054 GANQ9H2C0 597 aa16.97■□□□□ 0.31
CCDC90B-201ENST00000260054 NXF1Q9UBU9 619 aaKnown RBP16.97■□□□□ 0.31
CCDC90B-201ENST00000260054 APEX2Q9UBZ4 518 aa16.97■□□□□ 0.31
CCDC90B-201ENST00000260054 AJAP1Q9UKB5 411 aaPredicted RBP16.97■□□□□ 0.31
CCDC90B-201ENST00000260054 POLIQ9UNA4 740 aa16.97■□□□□ 0.31
CCDC90B-201ENST00000260054 ITIH6Q6UXX5 1313 aa16.97■□□□□ 0.31
CCDC90B-201ENST00000260054 ARHGEF15O94989 841 aa16.97■□□□□ 0.31
CCDC90B-201ENST00000260054 LAG3P18627 525 aa16.97■□□□□ 0.31
CCDC90B-201ENST00000260054 ASPAP45381 313 aa16.97■□□□□ 0.31
CCDC90B-201ENST00000260054 BRCC3P46736 316 aa16.97■□□□□ 0.31
CCDC90B-201ENST00000260054 ALDH7A1P49419 539 aaKnown RBP16.97■□□□□ 0.31
CCDC90B-201ENST00000260054 AARSP49588 968 aaKnown RBP eCLIP16.97■□□□□ 0.31
CCDC90B-201ENST00000260054 SV2CQ496J9 727 aa16.97■□□□□ 0.31
CCDC90B-201ENST00000260054 ZNF667Q5HYK9 610 aa16.97■□□□□ 0.31
CCDC90B-201ENST00000260054 SPECC1LQ69YQ0 1117 aa16.97■□□□□ 0.31
CCDC90B-201ENST00000260054 KCNT2Q6UVM3 1135 aa16.97■□□□□ 0.31
CCDC90B-201ENST00000260054 RRAGAQ7L523 313 aa16.97■□□□□ 0.31
CCDC90B-201ENST00000260054 PPM1KQ8N3J5 372 aa16.97■□□□□ 0.31
CCDC90B-201ENST00000260054 COLGALT1Q8NBJ5 622 aa16.97■□□□□ 0.31
CCDC90B-201ENST00000260054 CLP1Q92989 425 aaKnown RBP16.97■□□□□ 0.31
CCDC90B-201ENST00000260054 KAT5Q92993 513 aa16.97■□□□□ 0.31
CCDC90B-201ENST00000260054 ARID3AQ99856 593 aa16.97■□□□□ 0.31
CCDC90B-201ENST00000260054 SNX9Q9Y5X1 595 aa16.97■□□□□ 0.31
CCDC90B-201ENST00000260054 FHOD1Q9Y613 1164 aa16.97■□□□□ 0.31
CCDC90B-201ENST00000260054 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.96■□□□□ 0.31
CCDC90B-201ENST00000260054 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.96■□□□□ 0.31
CCDC90B-201ENST00000260054 LINC01553A4QN01 128 aa16.96■□□□□ 0.31
CCDC90B-201ENST00000260054 I3L4J1 428 aa16.96■□□□□ 0.31
CCDC90B-201ENST00000260054 UCHL3P15374 230 aa16.96■□□□□ 0.31
CCDC90B-201ENST00000260054 TIGD5Q53EQ6 642 aa16.96■□□□□ 0.31
CCDC90B-201ENST00000260054 NEK11Q8NG66 645 aa16.96■□□□□ 0.31
CCDC90B-201ENST00000260054 ZNF558Q96NG5 402 aa16.96■□□□□ 0.31
CCDC90B-201ENST00000260054 COLEC11Q9BWP8 271 aa16.96■□□□□ 0.31
CCDC90B-201ENST00000260054 TTYH3Q9C0H2 523 aa16.96■□□□□ 0.31
CCDC90B-201ENST00000260054 NIF3L1Q9GZT8 377 aa16.96■□□□□ 0.31
CCDC90B-201ENST00000260054 UBE2TQ9NPD8 197 aaPredicted RBP16.96■□□□□ 0.31
CCDC90B-201ENST00000260054 GDAP2Q9NXN4 497 aa16.96■□□□□ 0.31
CCDC90B-201ENST00000260054 ADAM28Q9UKQ2 775 aa16.96■□□□□ 0.31
CCDC90B-201ENST00000260054 YBX2Q9Y2T7 364 aaKnown RBP16.96■□□□□ 0.31
CCDC90B-201ENST00000260054 CA3P07451 260 aa16.95■□□□□ 0.3
CCDC90B-201ENST00000260054 TRIM21P19474 475 aaKnown RBP16.95■□□□□ 0.3
CCDC90B-201ENST00000260054 PBX2P40425 430 aa16.95■□□□□ 0.3
CCDC90B-201ENST00000260054 GCNT1Q02742 428 aa16.95■□□□□ 0.3
CCDC90B-201ENST00000260054 IQCEQ6IPM2 695 aa16.95■□□□□ 0.3
CCDC90B-201ENST00000260054 SCARA5Q6ZMJ2 495 aa16.95■□□□□ 0.3
CCDC90B-201ENST00000260054 TMC6Q7Z403 805 aa16.95■□□□□ 0.3
CCDC90B-201ENST00000260054 SENP8Q96LD8 212 aa16.95■□□□□ 0.3
CCDC90B-201ENST00000260054 KREMEN1Q96MU8 473 aa16.95■□□□□ 0.3
CCDC90B-201ENST00000260054 NAA15Q9BXJ9 866 aaKnown RBP16.95■□□□□ 0.3
CCDC90B-201ENST00000260054 PBX4Q9BYU1 374 aa16.95■□□□□ 0.3
CCDC90B-201ENST00000260054 SDCBP2Q9H190 292 aa16.95■□□□□ 0.3
CCDC90B-201ENST00000260054 SMYD3Q9H7B4 428 aa16.95■□□□□ 0.3
CCDC90B-201ENST00000260054 DNAJC12Q9UKB3 198 aa16.95■□□□□ 0.3
CCDC90B-201ENST00000260054 PCDHA11Q9Y5I1 949 aa16.95■□□□□ 0.3
CCDC90B-201ENST00000260054 KIAA1671Q9BY89 1806 aa16.95■□□□□ 0.3
CCDC90B-201ENST00000260054 GBF1Q92538 1859 aa16.95■□□□□ 0.3
CCDC90B-201ENST00000260054 TADA2AO75478 443 aa16.94■□□□□ 0.3
CCDC90B-201ENST00000260054 CDC25BP30305 580 aa16.94■□□□□ 0.3
CCDC90B-201ENST00000260054 POLR2FP61218 127 aaKnown RBP16.94■□□□□ 0.3
CCDC90B-201ENST00000260054 TNNC1P63316 161 aa16.94■□□□□ 0.3
CCDC90B-201ENST00000260054 CUL2Q13617 745 aa16.94■□□□□ 0.3
CCDC90B-201ENST00000260054 FIGNQ5HY92 759 aa16.94■□□□□ 0.3
CCDC90B-201ENST00000260054 SPRED2Q7Z698 418 aa16.94■□□□□ 0.3
CCDC90B-201ENST00000260054 SLC39A11Q8N1S5 342 aa16.94■□□□□ 0.3
CCDC90B-201ENST00000260054 IGSF21Q96ID5 467 aa16.94■□□□□ 0.3
CCDC90B-201ENST00000260054 MMS19Q96T76 1030 aa16.94■□□□□ 0.3
CCDC90B-201ENST00000260054 BCO2Q9BYV7 579 aa16.94■□□□□ 0.3
CCDC90B-201ENST00000260054 FBXL5Q9UKA1 691 aa16.94■□□□□ 0.3
CCDC90B-201ENST00000260054 RNF225M0QZC1 329 aaPredicted RBP16.94■□□□□ 0.3
CCDC90B-201ENST00000260054 CYB561D2O14569 222 aa16.94■□□□□ 0.3
CCDC90B-201ENST00000260054 GYPCP04921 128 aa16.94■□□□□ 0.3
CCDC90B-201ENST00000260054 WEE2P0C1S8 567 aa16.94■□□□□ 0.3
CCDC90B-201ENST00000260054 PAX3P23760 479 aa16.94■□□□□ 0.3
CCDC90B-201ENST00000260054 RAP1GAPP47736 663 aa16.94■□□□□ 0.3
CCDC90B-201ENST00000260054 CDH8P55286 799 aa16.94■□□□□ 0.3
CCDC90B-201ENST00000260054 SOWAHAQ2M3V2 549 aa16.94■□□□□ 0.3
CCDC90B-201ENST00000260054 DSTYKQ6XUX3 929 aa16.94■□□□□ 0.3
CCDC90B-201ENST00000260054 LIMS2Q7Z4I7 341 aa16.94■□□□□ 0.3
CCDC90B-201ENST00000260054 FAXDC2Q96IV6 333 aa16.94■□□□□ 0.3
CCDC90B-201ENST00000260054 SUSD3Q96L08 255 aa16.94■□□□□ 0.3
CCDC90B-201ENST00000260054 GPR62Q9BZJ7 368 aa16.94■□□□□ 0.3
CCDC90B-201ENST00000260054 NLRC4Q9NPP4 1024 aa16.94■□□□□ 0.3
CCDC90B-201ENST00000260054 AAASQ9NRG9 546 aa16.94■□□□□ 0.3
CCDC90B-201ENST00000260054 L1RE1Q9UN81 338 aa16.94■□□□□ 0.3
CCDC90B-201ENST00000260054 M0QZQ0 153 aa16.93■□□□□ 0.3
CCDC90B-201ENST00000260054 EFEMP2O95967 443 aa16.93■□□□□ 0.3
CCDC90B-201ENST00000260054 P4HA1P13674 534 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms