RNA–Protein interactions for RNA: ENST00000259605.10

RNF38-201, Transcript of ring finger protein 38, humanhuman

TSL 1 (best) BASIC

Gene RNF38, Length 5,012 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-201ENST00000259605 HSPA1AP0DMV8 641 aaKnown RBP4.24□□□□□ -1.73
RNF38-201ENST00000259605 HSPA1BP0DMV9 641 aaKnown RBP4.24□□□□□ -1.73
RNF38-201ENST00000259605 PIM1P11309 404 aaPredicted RBP4.24□□□□□ -1.73
RNF38-201ENST00000259605 FGFR2P21802 821 aa4.24□□□□□ -1.73
RNF38-201ENST00000259605 ADD1P35611 737 aaKnown RBP4.24□□□□□ -1.73
RNF38-201ENST00000259605 HNF1BP35680 557 aa4.24□□□□□ -1.73
RNF38-201ENST00000259605 GNL1P36915 607 aaPredicted RBP4.24□□□□□ -1.73
RNF38-201ENST00000259605 HADHAP40939 763 aa4.24□□□□□ -1.73
RNF38-201ENST00000259605 ZNF445P59923 1031 aa4.24□□□□□ -1.73
RNF38-201ENST00000259605 FKBP3Q00688 224 aaKnown RBP4.24□□□□□ -1.73
RNF38-201ENST00000259605 FAM160A1Q05DH4 1040 aa4.24□□□□□ -1.73
RNF38-201ENST00000259605 SMARCB1Q12824 385 aa4.24□□□□□ -1.73
RNF38-201ENST00000259605 NR5A1Q13285 461 aa4.24□□□□□ -1.73
RNF38-201ENST00000259605 PCBP1Q15365 356 aaKnown RBP eCLIP4.24□□□□□ -1.73
RNF38-201ENST00000259605 GSTA3Q16772 222 aa4.24□□□□□ -1.73
RNF38-201ENST00000259605 CFAP221Q4G0U5 840 aa4.24□□□□□ -1.73
RNF38-201ENST00000259605 PPP6R3Q5H9R7 873 aaPredicted RBP4.24□□□□□ -1.73
RNF38-201ENST00000259605 ICE2Q659A1 982 aa4.24□□□□□ -1.73
RNF38-201ENST00000259605 ATG16L1Q676U5 607 aa4.24□□□□□ -1.73
RNF38-201ENST00000259605 FAAH2Q6GMR7 532 aa4.24□□□□□ -1.73
RNF38-201ENST00000259605 C8orf74Q6P047 294 aa4.24□□□□□ -1.73
RNF38-201ENST00000259605 RCOR2Q8IZ40 523 aa4.24□□□□□ -1.73
RNF38-201ENST00000259605 FAM9CQ8IZT9 166 aa4.24□□□□□ -1.73
RNF38-201ENST00000259605 LEMD2Q8NC56 503 aa4.24□□□□□ -1.73
RNF38-201ENST00000259605 FBXO18Q8NFZ0 1043 aa4.24□□□□□ -1.73
RNF38-201ENST00000259605 SETD7Q8WTS6 366 aaKnown RBP4.24□□□□□ -1.73
RNF38-201ENST00000259605 GPKOWQ92917 476 aaPredicted RBP eCLIP4.24□□□□□ -1.73
RNF38-201ENST00000259605 TCEANC2Q96MN5 208 aa4.24□□□□□ -1.73
RNF38-201ENST00000259605 MTMR9Q96QG7 549 aa4.24□□□□□ -1.73
RNF38-201ENST00000259605 NT5C1AQ9BXI3 368 aa4.24□□□□□ -1.73
RNF38-201ENST00000259605 FAM96AQ9H5X1 160 aa4.24□□□□□ -1.73
RNF38-201ENST00000259605 MCCC2Q9HCC0 563 aa4.24□□□□□ -1.73
RNF38-201ENST00000259605 DZANK1Q9NVP4 752 aa4.24□□□□□ -1.73
RNF38-201ENST00000259605 CDKN2AIPQ9NXV6 580 aaPredicted RBP4.24□□□□□ -1.73
RNF38-201ENST00000259605 GPRC5DQ9NZD1 345 aa4.24□□□□□ -1.73
RNF38-201ENST00000259605 VPS28Q9UK41 221 aa4.24□□□□□ -1.73
RNF38-201ENST00000259605 AGO2Q9UKV8 859 aaKnown RBP4.24□□□□□ -1.73
RNF38-201ENST00000259605 TPX2Q9ULW0 747 aaKnown RBP4.24□□□□□ -1.73
RNF38-201ENST00000259605 PCDHA5Q9Y5H7 936 aa4.24□□□□□ -1.73
RNF38-201ENST00000259605 ABCA5Q8WWZ7 1642 aa4.24□□□□□ -1.73
RNF38-201ENST00000259605 LRRD1A4D1F6 860 aa4.24□□□□□ -1.73
RNF38-201ENST00000259605 C3orf70A6NLC5 250 aaPredicted RBP4.24□□□□□ -1.73
RNF38-201ENST00000259605 H3BMM5 538 aa4.24□□□□□ -1.73
RNF38-201ENST00000259605 MAN2B1O00754 1011 aa4.24□□□□□ -1.73
RNF38-201ENST00000259605 STX7O15400 261 aaKnown RBP4.24□□□□□ -1.73
RNF38-201ENST00000259605 DLX3O60479 287 aa4.24□□□□□ -1.73
RNF38-201ENST00000259605 CSH1P0DML2 217 aa4.24□□□□□ -1.73
RNF38-201ENST00000259605 CSH2P0DML3 217 aa4.24□□□□□ -1.73
RNF38-201ENST00000259605 ITGALP20701 1170 aa4.24□□□□□ -1.73
RNF38-201ENST00000259605 MUTP22033 750 aa4.24□□□□□ -1.73
RNF38-201ENST00000259605 DDIT3P35638 169 aa4.24□□□□□ -1.73
RNF38-201ENST00000259605 USP11P51784 963 aa4.24□□□□□ -1.73
RNF38-201ENST00000259605 OAZ1P54368 228 aa4.24□□□□□ -1.73
RNF38-201ENST00000259605 ZBED6P86452 979 aa4.24□□□□□ -1.73
RNF38-201ENST00000259605 RBPJQ06330 500 aa4.24□□□□□ -1.73
RNF38-201ENST00000259605 CNTN1Q12860 1018 aa4.24□□□□□ -1.73
RNF38-201ENST00000259605 NME3Q13232 169 aa4.24□□□□□ -1.73
RNF38-201ENST00000259605 GPM6BQ13491 265 aa4.24□□□□□ -1.73
RNF38-201ENST00000259605 CAPRIN1Q14444 709 aaKnown RBP4.24□□□□□ -1.73
RNF38-201ENST00000259605 MFSD10Q14728 455 aa4.24□□□□□ -1.73
RNF38-201ENST00000259605 CLEC16AQ2KHT3 1053 aa4.24□□□□□ -1.73
RNF38-201ENST00000259605 TCP11X2Q5H9J9 407 aa4.24□□□□□ -1.73
RNF38-201ENST00000259605 FKBP1CQ5VVH2 108 aa4.24□□□□□ -1.73
RNF38-201ENST00000259605 CHPFQ8IZ52 775 aa4.24□□□□□ -1.73
RNF38-201ENST00000259605 C10orf53Q8N6V4 93 aa4.24□□□□□ -1.73
RNF38-201ENST00000259605 CCDC185Q8N715 623 aa4.24□□□□□ -1.73
RNF38-201ENST00000259605 TTLL11Q8NHH1 800 aa4.24□□□□□ -1.73
RNF38-201ENST00000259605 VPS33AQ96AX1 596 aa4.24□□□□□ -1.73
RNF38-201ENST00000259605 SLC4A9Q96Q91 983 aa4.24□□□□□ -1.73
RNF38-201ENST00000259605 CAMKK2Q96RR4 588 aa4.24□□□□□ -1.73
RNF38-201ENST00000259605 NELL2Q99435 816 aa4.24□□□□□ -1.73
RNF38-201ENST00000259605 SLC29A3Q9BZD2 475 aa4.24□□□□□ -1.73
RNF38-201ENST00000259605 SPATC1LQ9H0A9 340 aa4.24□□□□□ -1.73
RNF38-201ENST00000259605 CARD9Q9H257 536 aa4.24□□□□□ -1.73
RNF38-201ENST00000259605 RBAKQ9NYW8 714 aaPredicted RBP4.24□□□□□ -1.73
RNF38-201ENST00000259605 KIF17Q9P2E2 1029 aa4.24□□□□□ -1.73
RNF38-201ENST00000259605 MRPS33Q9Y291 106 aaKnown RBP4.24□□□□□ -1.73
RNF38-201ENST00000259605 TDRKHQ9Y2W6 561 aaKnown RBP4.24□□□□□ -1.73
RNF38-201ENST00000259605 TMX2Q9Y320 296 aa4.24□□□□□ -1.73
RNF38-201ENST00000259605 DAAM1Q9Y4D1 1078 aa4.24□□□□□ -1.73
RNF38-201ENST00000259605 CDC42BPGQ6DT37 1551 aa4.24□□□□□ -1.73
RNF38-201ENST00000259605 TTLL8A6PVC2 850 aa4.24□□□□□ -1.73
RNF38-201ENST00000259605 M0R3G1 203 aa4.24□□□□□ -1.73
RNF38-201ENST00000259605 IGSF6O95976 241 aa4.24□□□□□ -1.73
RNF38-201ENST00000259605 RHOCP08134 193 aa4.24□□□□□ -1.73
RNF38-201ENST00000259605 ATP6V1C1P21283 382 aa4.24□□□□□ -1.73
RNF38-201ENST00000259605 MAPK8P45983 427 aa4.24□□□□□ -1.73
RNF38-201ENST00000259605 LIG3P49916 1009 aa4.24□□□□□ -1.73
RNF38-201ENST00000259605 OCRLQ01968 901 aa4.24□□□□□ -1.73
RNF38-201ENST00000259605 XRCC4Q13426 336 aa4.24□□□□□ -1.73
RNF38-201ENST00000259605 ACVR2BQ13705 512 aa4.24□□□□□ -1.73
RNF38-201ENST00000259605 CCDC85BQ15834 202 aaPredicted RBP4.24□□□□□ -1.73
RNF38-201ENST00000259605 UGP2Q16851 508 aa4.24□□□□□ -1.73
RNF38-201ENST00000259605 HP1BP3Q5SSJ5 553 aaPredicted RBP4.24□□□□□ -1.73
RNF38-201ENST00000259605 HEATR6Q6AI08 1181 aaKnown RBP4.24□□□□□ -1.73
RNF38-201ENST00000259605 TIGD7Q6NT04 549 aaPredicted RBP4.24□□□□□ -1.73
RNF38-201ENST00000259605 LLGL2Q6P1M3 1020 aa4.24□□□□□ -1.73
RNF38-201ENST00000259605 AGMOQ6ZNB7 445 aa4.24□□□□□ -1.73
RNF38-201ENST00000259605 DSELQ8IZU8 1212 aa4.24□□□□□ -1.73
RNF38-201ENST00000259605 GPD1LQ8N335 351 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms