RNA–Protein interactions for RNA: ENST00000258607.9

CKAP2-201, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CKAP2, Length 3,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-201ENST00000258607 ERICH1Q86X53 443 aa9.67□□□□□ -0.86
CKAP2-201ENST00000258607 JAMLQ86YT9 394 aa9.67□□□□□ -0.86
CKAP2-201ENST00000258607 SYCE1Q8N0S2 351 aa9.67□□□□□ -0.86
CKAP2-201ENST00000258607 LRRC57Q8N9N7 239 aa9.67□□□□□ -0.86
CKAP2-201ENST00000258607 GLIS1Q8NBF1 620 aa9.67□□□□□ -0.86
CKAP2-201ENST00000258607 BRI3BPQ8WY22 251 aa9.67□□□□□ -0.86
CKAP2-201ENST00000258607 PIWIL1Q96J94 861 aaKnown RBP9.67□□□□□ -0.86
CKAP2-201ENST00000258607 SCAMP3O14828 347 aaKnown RBP9.67□□□□□ -0.86
CKAP2-201ENST00000258607 RTN2O75298 545 aa9.67□□□□□ -0.86
CKAP2-201ENST00000258607 STAG3L1P0CL83 205 aa9.67□□□□□ -0.86
CKAP2-201ENST00000258607 PSMA2P25787 234 aa9.67□□□□□ -0.86
CKAP2-201ENST00000258607 BCAR1P56945 870 aa9.67□□□□□ -0.86
CKAP2-201ENST00000258607 KRT17Q04695 432 aa9.67□□□□□ -0.86
CKAP2-201ENST00000258607 DUOXA2Q1HG44 320 aa9.67□□□□□ -0.86
CKAP2-201ENST00000258607 EML3Q32P44 896 aa9.67□□□□□ -0.86
CKAP2-201ENST00000258607 ZNF667Q5HYK9 610 aa9.67□□□□□ -0.86
CKAP2-201ENST00000258607 FAM102AQ5T9C2 384 aaPredicted RBP9.67□□□□□ -0.86
CKAP2-201ENST00000258607 CXCL17Q6UXB2 119 aa9.67□□□□□ -0.86
CKAP2-201ENST00000258607 SCUBE3Q8IX30 993 aa9.67□□□□□ -0.86
CKAP2-201ENST00000258607 TMEM121Q9BTD3 319 aa9.67□□□□□ -0.86
CKAP2-201ENST00000258607 MKNK1Q9BUB5 465 aa9.67□□□□□ -0.86
CKAP2-201ENST00000258607 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.67□□□□□ -0.86
CKAP2-201ENST00000258607 STK24Q9Y6E0 443 aa9.67□□□□□ -0.86
CKAP2-201ENST00000258607 DLEC1Q9Y238 1755 aa9.67□□□□□ -0.86
CKAP2-201ENST00000258607 H0YHG0 523 aa9.66□□□□□ -0.86
CKAP2-201ENST00000258607 ADCY3O60266 1144 aa9.66□□□□□ -0.86
CKAP2-201ENST00000258607 CD48P09326 243 aa9.66□□□□□ -0.86
CKAP2-201ENST00000258607 TMEM253P0C7T8 217 aa9.66□□□□□ -0.86
CKAP2-201ENST00000258607 NEFHP12036 1026 aa9.66□□□□□ -0.86
CKAP2-201ENST00000258607 CREB1P16220 341 aa9.66□□□□□ -0.86
CKAP2-201ENST00000258607 CDK17Q00537 523 aa9.66□□□□□ -0.86
CKAP2-201ENST00000258607 CDR2Q01850 454 aa9.66□□□□□ -0.86
CKAP2-201ENST00000258607 MMRN1Q13201 1228 aa9.66□□□□□ -0.86
CKAP2-201ENST00000258607 DPY19L2P1Q6NXN4 242 aa9.66□□□□□ -0.86
CKAP2-201ENST00000258607 DENND1BQ6P3S1 775 aa9.66□□□□□ -0.86
CKAP2-201ENST00000258607 CHST13Q8NET6 341 aa9.66□□□□□ -0.86
CKAP2-201ENST00000258607 EIF2AQ9BY44 585 aaKnown RBP9.66□□□□□ -0.86
CKAP2-201ENST00000258607 NXF3Q9H4D5 531 aaKnown RBP9.66□□□□□ -0.86
CKAP2-201ENST00000258607 METTL5Q9NRN9 209 aaKnown RBP9.66□□□□□ -0.86
CKAP2-201ENST00000258607 ADCY6O43306 1168 aa9.66□□□□□ -0.86
CKAP2-201ENST00000258607 DKC1O60832 514 aaKnown RBP eCLIP9.66□□□□□ -0.86
CKAP2-201ENST00000258607 MYZAPP0CAP1 466 aa9.66□□□□□ -0.86
CKAP2-201ENST00000258607 ARF4P18085 180 aaPredicted RBP9.66□□□□□ -0.86
CKAP2-201ENST00000258607 RPL21P46778 160 aaKnown RBP9.66□□□□□ -0.86
CKAP2-201ENST00000258607 MARSP56192 900 aaKnown RBP9.66□□□□□ -0.86
CKAP2-201ENST00000258607 RWDD2BP57060 319 aa9.66□□□□□ -0.86
CKAP2-201ENST00000258607 ZNF618Q5T7W0 954 aa9.66□□□□□ -0.86
CKAP2-201ENST00000258607 KDELC2Q7Z4H8 507 aa9.66□□□□□ -0.86
CKAP2-201ENST00000258607 RIOX2Q8IUF8 465 aa9.66□□□□□ -0.86
CKAP2-201ENST00000258607 JOSD2Q8TAC2 188 aa9.66□□□□□ -0.86
CKAP2-201ENST00000258607 RNF39Q9H2S5 420 aa9.66□□□□□ -0.86
CKAP2-201ENST00000258607 C12orf65Q9H3J6 166 aaKnown RBP9.66□□□□□ -0.86
CKAP2-201ENST00000258607 VPS37BQ9H9H4 285 aa9.66□□□□□ -0.86
CKAP2-201ENST00000258607 GBA2Q9HCG7 927 aaPredicted RBP9.66□□□□□ -0.86
CKAP2-201ENST00000258607 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.66□□□□□ -0.86
CKAP2-201ENST00000258607 SEPT10Q9P0V9 454 aa9.66□□□□□ -0.86
CKAP2-201ENST00000258607 RAB21Q9UL25 225 aa9.66□□□□□ -0.86
CKAP2-201ENST00000258607 KIAA1217Q5T5P2 1943 aa9.66□□□□□ -0.86
CKAP2-201ENST00000258607 PJA2O43164 708 aa9.66□□□□□ -0.86
CKAP2-201ENST00000258607 VIMP08670 466 aaKnown RBP9.66□□□□□ -0.86
CKAP2-201ENST00000258607 AFF1P51825 1210 aaKnown RBP9.66□□□□□ -0.86
CKAP2-201ENST00000258607 ARPP19P56211 112 aa9.66□□□□□ -0.86
CKAP2-201ENST00000258607 IRX4P78413 519 aa9.66□□□□□ -0.86
CKAP2-201ENST00000258607 IFI35P80217 286 aaPredicted RBP9.66□□□□□ -0.86
CKAP2-201ENST00000258607 BASP1P80723 227 aaKnown RBP9.66□□□□□ -0.86
CKAP2-201ENST00000258607 GAD2Q05329 585 aa9.66□□□□□ -0.86
CKAP2-201ENST00000258607 CELF3Q5SZQ8 465 aaKnown RBP9.66□□□□□ -0.86
CKAP2-201ENST00000258607 NPNTQ6UXI9 565 aa9.66□□□□□ -0.86
CKAP2-201ENST00000258607 PRELID2Q8N945 189 aa9.66□□□□□ -0.86
CKAP2-201ENST00000258607 SCFD2Q8WU76 684 aa9.66□□□□□ -0.86
CKAP2-201ENST00000258607 ANKRD36BP1Q96IX9 119 aa9.66□□□□□ -0.86
CKAP2-201ENST00000258607 PGLYRP2Q96PD5 576 aa9.66□□□□□ -0.86
CKAP2-201ENST00000258607 SGIP1Q9BQI5 828 aa9.66□□□□□ -0.86
CKAP2-201ENST00000258607 CAPS2Q9BXY5 557 aa9.66□□□□□ -0.86
CKAP2-201ENST00000258607 ARHGAP39Q9C0H5 1083 aa9.66□□□□□ -0.86
CKAP2-201ENST00000258607 CDT1Q9H211 546 aa9.66□□□□□ -0.86
CKAP2-201ENST00000258607 ARHGAP28Q9P2N2 729 aa9.66□□□□□ -0.86
CKAP2-201ENST00000258607 MTUS1Q9ULD2 1270 aa9.66□□□□□ -0.86
CKAP2-201ENST00000258607 SPAG7O75391 227 aa9.65□□□□□ -0.86
CKAP2-201ENST00000258607 RFC1P35251 1148 aaPredicted RBP9.65□□□□□ -0.86
CKAP2-201ENST00000258607 GNASQ5JWF2 1037 aa9.65□□□□□ -0.86
CKAP2-201ENST00000258607 LIN9Q5TKA1 542 aa9.65□□□□□ -0.86
CKAP2-201ENST00000258607 ANKS1BQ7Z6G8 1248 aa9.65□□□□□ -0.86
CKAP2-201ENST00000258607 FAM71AQ8IYT1 594 aa9.65□□□□□ -0.86
CKAP2-201ENST00000258607 C2orf69Q8N8R5 385 aa9.65□□□□□ -0.86
CKAP2-201ENST00000258607 SHC3Q92529 594 aa9.65□□□□□ -0.86
CKAP2-201ENST00000258607 KHSRPQ92945 711 aaKnown RBP eCLIP9.65□□□□□ -0.866e-6■■□□□ 13.6
CKAP2-201ENST00000258607 ZSWIM1Q9BR11 485 aa9.65□□□□□ -0.86
CKAP2-201ENST00000258607 NOCTQ9UK39 431 aaKnown RBP9.65□□□□□ -0.86
CKAP2-201ENST00000258607 NOD1Q9Y239 953 aa9.65□□□□□ -0.86
CKAP2-201ENST00000258607 CEP83Q9Y592 693 aa9.65□□□□□ -0.86
CKAP2-201ENST00000258607 UBE4BO95155 1302 aa9.65□□□□□ -0.86
CKAP2-201ENST00000258607 VGLL3A8MV65 326 aa9.65□□□□□ -0.86
CKAP2-201ENST00000258607 MAP2K7O14733 419 aa9.65□□□□□ -0.86
CKAP2-201ENST00000258607 CAND2O75155 1236 aa9.65□□□□□ -0.86
CKAP2-201ENST00000258607 TOM1L1O75674 476 aa9.65□□□□□ -0.86
CKAP2-201ENST00000258607 ELNP15502 786 aa9.65□□□□□ -0.86
CKAP2-201ENST00000258607 NAMPTP43490 491 aa9.65□□□□□ -0.86
CKAP2-201ENST00000258607 GABPB1Q06547 395 aaPredicted RBP9.65□□□□□ -0.86
CKAP2-201ENST00000258607 COBLL1Q53SF7 1204 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms