RNA–Protein interactions for RNA: ENST00000254480.9

SMARCC1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCC1, Length 6,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-201ENST00000254480 PHF20L1A8MW92 1017 aa19.61■□□□□ 0.73
SMARCC1-201ENST00000254480 C19orf81C9J6K1 198 aa19.61■□□□□ 0.73
SMARCC1-201ENST00000254480 PGK2P07205 417 aa19.61■□□□□ 0.73
SMARCC1-201ENST00000254480 YY1P25490 414 aa19.61■□□□□ 0.73
SMARCC1-201ENST00000254480 NAF1Q96HR8 494 aaKnown RBP19.61■□□□□ 0.73
SMARCC1-201ENST00000254480 TASP1Q9H6P5 420 aa19.61■□□□□ 0.73
SMARCC1-201ENST00000254480 ABI2Q9NYB9 513 aaPredicted RBP19.61■□□□□ 0.73
SMARCC1-201ENST00000254480 SENP1Q9P0U3 644 aa19.61■□□□□ 0.73
SMARCC1-201ENST00000254480 TULP4Q9NRJ4 1543 aa19.61■□□□□ 0.73
SMARCC1-201ENST00000254480 PRR23AA6NEV1 266 aa19.61■□□□□ 0.73
SMARCC1-201ENST00000254480 PLEKP08567 350 aaPredicted RBP19.61■□□□□ 0.73
SMARCC1-201ENST00000254480 SPATA18Q8TC71 538 aa19.61■□□□□ 0.73
SMARCC1-201ENST00000254480 C20orf96Q9NUD7 363 aaPredicted RBP19.61■□□□□ 0.73
SMARCC1-201ENST00000254480 NAGPAQ9UK23 515 aa19.61■□□□□ 0.73
SMARCC1-201ENST00000254480 PHF2O75151 1096 aa19.61■□□□□ 0.73
SMARCC1-201ENST00000254480 NCAM1P13591 858 aa19.61■□□□□ 0.73
SMARCC1-201ENST00000254480 SLC1A1P43005 524 aa19.61■□□□□ 0.73
SMARCC1-201ENST00000254480 PAN2Q504Q3 1202 aaKnown RBP19.61■□□□□ 0.73
SMARCC1-201ENST00000254480 TTC39CQ8N584 583 aa19.61■□□□□ 0.73
SMARCC1-201ENST00000254480 TMEM106CQ9BVX2 250 aa19.61■□□□□ 0.73
SMARCC1-201ENST00000254480 ARHGEF38Q9NXL2 777 aa19.61■□□□□ 0.73
SMARCC1-201ENST00000254480 SPATA31A1Q5TZJ5 1347 aa19.61■□□□□ 0.73
SMARCC1-201ENST00000254480 NR1I3Q14994 352 aa19.6■□□□□ 0.73
SMARCC1-201ENST00000254480 HS6ST3Q8IZP7 471 aa19.6■□□□□ 0.73
SMARCC1-201ENST00000254480 PARK7Q99497 189 aaKnown RBP19.6■□□□□ 0.73
SMARCC1-201ENST00000254480 NT5C1AQ9BXI3 368 aa19.6■□□□□ 0.73
SMARCC1-201ENST00000254480 ASPSCR1Q9BZE9 553 aa19.6■□□□□ 0.73
SMARCC1-201ENST00000254480 SNX5Q9Y5X3 404 aa19.6■□□□□ 0.73
SMARCC1-201ENST00000254480 ENTPD3O75355 529 aa19.6■□□□□ 0.73
SMARCC1-201ENST00000254480 DGKIO75912 1065 aa19.6■□□□□ 0.73
SMARCC1-201ENST00000254480 ENO3P13929 434 aaPredicted RBP19.6■□□□□ 0.73
SMARCC1-201ENST00000254480 FLOT2Q14254 428 aa19.6■□□□□ 0.73
SMARCC1-201ENST00000254480 HHIPL2Q6UWX4 724 aa19.6■□□□□ 0.73
SMARCC1-201ENST00000254480 SHCBP1LQ9BZQ2 653 aa19.6■□□□□ 0.73
SMARCC1-201ENST00000254480 AP2B1P63010 937 aa19.6■□□□□ 0.73
SMARCC1-201ENST00000254480 EZH2Q15910 746 aaKnown RBP19.6■□□□□ 0.73
SMARCC1-201ENST00000254480 ICA1LQ8NDH6 482 aa19.6■□□□□ 0.73
SMARCC1-201ENST00000254480 RUSC1Q9BVN2 902 aa19.6■□□□□ 0.73
SMARCC1-201ENST00000254480 RAD51CO43502 376 aa19.6■□□□□ 0.73
SMARCC1-201ENST00000254480 APOL5Q9BWW9 433 aa19.6■□□□□ 0.73
SMARCC1-201ENST00000254480 IL1RL2Q9HB29 575 aa19.6■□□□□ 0.73
SMARCC1-201ENST00000254480 PCDHGB4Q9UN71 923 aa19.6■□□□□ 0.73
SMARCC1-201ENST00000254480 V9GYQ6 96 aa19.6■□□□□ 0.73
SMARCC1-201ENST00000254480 CYTH1Q15438 398 aa19.6■□□□□ 0.73
SMARCC1-201ENST00000254480 FAM71DQ8N9W8 422 aa19.6■□□□□ 0.73
SMARCC1-201ENST00000254480 SPIRE2Q8WWL2 714 aa19.6■□□□□ 0.73
SMARCC1-201ENST00000254480 STX18Q9P2W9 335 aaKnown RBP19.6■□□□□ 0.73
SMARCC1-201ENST00000254480 GTPBP10A4D1E9 387 aaKnown RBP19.59■□□□□ 0.73
SMARCC1-201ENST00000254480 NDUFS3O75489 264 aa19.59■□□□□ 0.73
SMARCC1-201ENST00000254480 MAP4P27816 1152 aaKnown RBP19.59■□□□□ 0.73
SMARCC1-201ENST00000254480 ZFYVE28Q9HCC9 887 aa19.59■□□□□ 0.73
SMARCC1-201ENST00000254480 SPDYE5A6NIY4 337 aa19.59■□□□□ 0.73
SMARCC1-201ENST00000254480 CST8O60676 142 aa19.59■□□□□ 0.73
SMARCC1-201ENST00000254480 ALDH1A1P00352 501 aa19.59■□□□□ 0.73
SMARCC1-201ENST00000254480 OCM2P0CE71 109 aa19.59■□□□□ 0.73
SMARCC1-201ENST00000254480 OCMP0CE72 109 aaPredicted RBP19.59■□□□□ 0.73
SMARCC1-201ENST00000254480 SPDYE7PQ495Y7 208 aa19.59■□□□□ 0.73
SMARCC1-201ENST00000254480 FBXO33Q7Z6M2 555 aa19.59■□□□□ 0.73
SMARCC1-201ENST00000254480 ELMO3Q96BJ8 720 aa19.59■□□□□ 0.73
SMARCC1-201ENST00000254480 CALR3Q96L12 384 aaKnown RBP19.59■□□□□ 0.73
SMARCC1-201ENST00000254480 ST8SIA6P61647 398 aa19.59■□□□□ 0.73
SMARCC1-201ENST00000254480 RRM2BQ7LG56 351 aa19.59■□□□□ 0.73
SMARCC1-201ENST00000254480 C1orf131Q8NDD1 294 aaKnown RBP19.59■□□□□ 0.73
SMARCC1-201ENST00000254480 GPRC5AQ8NFJ5 357 aa19.59■□□□□ 0.73
SMARCC1-201ENST00000254480 HASPINQ8TF76 798 aa19.59■□□□□ 0.73
SMARCC1-201ENST00000254480 HPDLQ96IR7 371 aa19.59■□□□□ 0.73
SMARCC1-201ENST00000254480 KYAT1Q16773 422 aa19.59■□□□□ 0.73
SMARCC1-201ENST00000254480 C11orf96Q7Z7L8 435 aa19.59■□□□□ 0.73
SMARCC1-201ENST00000254480 C11orf74Q86VG3 221 aa19.59■□□□□ 0.73
SMARCC1-201ENST00000254480 MED15Q96RN5 788 aa19.59■□□□□ 0.73
SMARCC1-201ENST00000254480 NDE1Q9NXR1 346 aa19.59■□□□□ 0.73
SMARCC1-201ENST00000254480 CSDE1O75534 798 aaKnown RBP19.59■□□□□ 0.73
SMARCC1-201ENST00000254480 ARHGEF26Q96DR7 871 aa19.59■□□□□ 0.73
SMARCC1-201ENST00000254480 SUPT3HB4E1H0 165 aa19.58■□□□□ 0.73
SMARCC1-201ENST00000254480 SUPT3HO75486 399 aa19.58■□□□□ 0.73
SMARCC1-201ENST00000254480 GYPCP04921 128 aa19.58■□□□□ 0.73
SMARCC1-201ENST00000254480 BYSLQ13895 437 aaKnown RBP19.58■□□□□ 0.73
SMARCC1-201ENST00000254480 C10orf120Q5SQS8 335 aa19.58■□□□□ 0.73
SMARCC1-201ENST00000254480 OSBPL1AQ9BXW6 950 aa19.58■□□□□ 0.73
SMARCC1-201ENST00000254480 LSM7Q9UK45 103 aaKnown RBP19.58■□□□□ 0.73
SMARCC1-201ENST00000254480 VPS72Q15906 364 aa19.58■□□□□ 0.73
SMARCC1-201ENST00000254480 KYNUQ16719 465 aa19.58■□□□□ 0.73
SMARCC1-201ENST00000254480 WDR48Q8TAF3 677 aa19.58■□□□□ 0.73
SMARCC1-201ENST00000254480 NEUROG2Q9H2A3 272 aa19.58■□□□□ 0.73
SMARCC1-201ENST00000254480 ZNF212Q9UDV6 495 aa19.58■□□□□ 0.73
SMARCC1-201ENST00000254480 PKP3Q9Y446 797 aa19.58■□□□□ 0.73
SMARCC1-201ENST00000254480 hCG_2014768A0A024R1R8 64 aa19.58■□□□□ 0.72
SMARCC1-201ENST00000254480 PGM1P36871 562 aa19.58■□□□□ 0.72
SMARCC1-201ENST00000254480 NFIAQ12857 509 aa19.58■□□□□ 0.72
SMARCC1-201ENST00000254480 C3orf62Q6ZUJ4 267 aa19.58■□□□□ 0.72
SMARCC1-201ENST00000254480 FAM136AQ96C01 138 aa19.58■□□□□ 0.72
SMARCC1-201ENST00000254480 PRMT6Q96LA8 375 aaPredicted RBP19.58■□□□□ 0.72
SMARCC1-201ENST00000254480 ZNF197O14709 1029 aa19.58■□□□□ 0.72
SMARCC1-201ENST00000254480 ATP6V1E1P36543 226 aa19.58■□□□□ 0.72
SMARCC1-201ENST00000254480 TC2NQ8N9U0 490 aa19.58■□□□□ 0.72
SMARCC1-201ENST00000254480 OSBPL8Q9BZF1 889 aa19.58■□□□□ 0.72
SMARCC1-201ENST00000254480 ENDOD1O94919 500 aa19.58■□□□□ 0.72
SMARCC1-201ENST00000254480 STAT4Q14765 748 aa19.58■□□□□ 0.72
SMARCC1-201ENST00000254480 SPATA21Q7Z572 469 aa19.58■□□□□ 0.72
SMARCC1-201ENST00000254480 SGF29Q96ES7 293 aa19.58■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms