RNA–Protein interactions for RNA: ENST00000253794.6

VPS25-201, Transcript of vacuolar protein sorting 25 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS25, Length 1,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-201ENST00000253794 SGSM1Q2NKQ1 1148 aa15.18■□□□□ 0.02
VPS25-201ENST00000253794 HABP4Q5JVS0 413 aaKnown RBP15.18■□□□□ 0.02
VPS25-201ENST00000253794 SMYD5Q6GMV2 418 aa15.18■□□□□ 0.02
VPS25-201ENST00000253794 GAS2L3Q86XJ1 694 aa15.18■□□□□ 0.02
VPS25-201ENST00000253794 FBXO22Q8NEZ5 403 aa15.18■□□□□ 0.02
VPS25-201ENST00000253794 LMO3Q8TAP4 145 aa15.18■□□□□ 0.02
VPS25-201ENST00000253794 SPATA18Q8TC71 538 aa15.18■□□□□ 0.02
VPS25-201ENST00000253794 HPDLQ96IR7 371 aa15.18■□□□□ 0.02
VPS25-201ENST00000253794 HERC2P3Q9BVR0 1158 aa15.18■□□□□ 0.02
VPS25-201ENST00000253794 LMAN2LQ9H0V9 348 aa15.18■□□□□ 0.02
VPS25-201ENST00000253794 ZNF576Q9H609 170 aa15.18■□□□□ 0.02
VPS25-201ENST00000253794 CHST7Q9NS84 486 aa15.18■□□□□ 0.02
VPS25-201ENST00000253794 ARHGEF37A1IGU5 675 aa15.17■□□□□ 0.02
VPS25-201ENST00000253794 KPNA7A9QM74 516 aa15.17■□□□□ 0.02
VPS25-201ENST00000253794 CYP11A1P05108 521 aa15.17■□□□□ 0.02
VPS25-201ENST00000253794 KRT19P08727 400 aa15.17■□□□□ 0.02
VPS25-201ENST00000253794 TYMPP19971 482 aa15.17■□□□□ 0.02
VPS25-201ENST00000253794 CDK11BP21127 795 aaKnown RBP15.17■□□□□ 0.02
VPS25-201ENST00000253794 FGFR3P22607 806 aa15.17■□□□□ 0.02
VPS25-201ENST00000253794 PIK3CAP42336 1068 aa15.17■□□□□ 0.02
VPS25-201ENST00000253794 MYL6P60660 151 aa15.17■□□□□ 0.02
VPS25-201ENST00000253794 KRT17Q04695 432 aa15.17■□□□□ 0.02
VPS25-201ENST00000253794 TIGD5Q53EQ6 642 aa15.17■□□□□ 0.02
VPS25-201ENST00000253794 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.17■□□□□ 0.02
VPS25-201ENST00000253794 DPH6Q7L8W6 267 aa15.17■□□□□ 0.02
VPS25-201ENST00000253794 SPPL3Q8TCT6 385 aa15.17■□□□□ 0.02
VPS25-201ENST00000253794 RABGGTAQ92696 567 aa15.17■□□□□ 0.02
VPS25-201ENST00000253794 SEMA4DQ92854 862 aa15.17■□□□□ 0.02
VPS25-201ENST00000253794 GPR62Q9BZJ7 368 aa15.17■□□□□ 0.02
VPS25-201ENST00000253794 FAM124BQ9H5Z6 455 aaPredicted RBP15.17■□□□□ 0.02
VPS25-201ENST00000253794 TAB2Q9NYJ8 693 aa15.17■□□□□ 0.02
VPS25-201ENST00000253794 R3HCC1Q9Y3T6 440 aaKnown RBP15.17■□□□□ 0.02
VPS25-201ENST00000253794 NUB1Q9Y5A7 615 aa15.17■□□□□ 0.02
VPS25-201ENST00000253794 IRAK3Q9Y616 596 aa15.17■□□□□ 0.02
VPS25-201ENST00000253794 CDH23Q9H251 3354 aa15.17■□□□□ 0.02
VPS25-201ENST00000253794 SCN1AP35498 2009 aa15.16■□□□□ 0.02
VPS25-201ENST00000253794 A0A1B0GTH6 734 aa15.16■□□□□ 0.02
VPS25-201ENST00000253794 LGALS16A8MUM7 142 aa15.16■□□□□ 0.02
VPS25-201ENST00000253794 TPM2P07951 284 aa15.16■□□□□ 0.02
VPS25-201ENST00000253794 BRCC3P46736 316 aa15.16■□□□□ 0.02
VPS25-201ENST00000253794 ZNF699Q32M78 642 aa15.16■□□□□ 0.02
VPS25-201ENST00000253794 TOP6BLQ8N6T0 577 aa15.16■□□□□ 0.02
VPS25-201ENST00000253794 EHBP1Q8NDI1 1231 aa15.16■□□□□ 0.02
VPS25-201ENST00000253794 SENP8Q96LD8 212 aa15.16■□□□□ 0.02
VPS25-201ENST00000253794 IMPG2Q9BZV3 1241 aa15.16■□□□□ 0.02
VPS25-201ENST00000253794 ZBP1Q9H171 429 aa15.16■□□□□ 0.02
VPS25-201ENST00000253794 TTYH1Q9H313 450 aaPredicted RBP15.16■□□□□ 0.02
VPS25-201ENST00000253794 MMRN2Q9H8L6 949 aa15.16■□□□□ 0.02
VPS25-201ENST00000253794 RTN4Q9NQC3 1192 aaKnown RBP15.16■□□□□ 0.02
VPS25-201ENST00000253794 PUF60Q9UHX1 559 aaKnown RBP15.16■□□□□ 0.02
VPS25-201ENST00000253794 PCDHB8Q9UN66 801 aa15.16■□□□□ 0.02
VPS25-201ENST00000253794 FSCN2O14926 492 aa15.15■□□□□ 0.02
VPS25-201ENST00000253794 LPXNO60711 386 aa15.15■□□□□ 0.02
VPS25-201ENST00000253794 LILRB3O75022 631 aa15.15■□□□□ 0.02
VPS25-201ENST00000253794 TACC1O75410 805 aa15.15■□□□□ 0.02
VPS25-201ENST00000253794 ODC1P11926 461 aa15.15■□□□□ 0.02
VPS25-201ENST00000253794 NOP14P78316 857 aaKnown RBP15.15■□□□□ 0.02
VPS25-201ENST00000253794 DSG1Q02413 1049 aa15.15■□□□□ 0.02
VPS25-201ENST00000253794 GPM6BQ13491 265 aa15.15■□□□□ 0.02
VPS25-201ENST00000253794 CAMK1Q14012 370 aa15.15■□□□□ 0.02
VPS25-201ENST00000253794 MRPL58Q14197 206 aaKnown RBP15.15■□□□□ 0.02
VPS25-201ENST00000253794 EXOC3L4Q17RC7 722 aa15.15■□□□□ 0.02
VPS25-201ENST00000253794 USP41Q3LFD5 358 aa15.15■□□□□ 0.02
VPS25-201ENST00000253794 PDE12Q6L8Q7 609 aaKnown RBP15.15■□□□□ 0.02
VPS25-201ENST00000253794 DPY19L2P1Q6NXN4 242 aa15.15■□□□□ 0.02
VPS25-201ENST00000253794 GBP6Q6ZN66 633 aa15.15■□□□□ 0.02
VPS25-201ENST00000253794 CREBRFQ8IUR6 639 aa15.15■□□□□ 0.02
VPS25-201ENST00000253794 TMEM86AQ8N2M4 240 aa15.15■□□□□ 0.02
VPS25-201ENST00000253794 CCDC150Q8NCX0 1101 aa15.15■□□□□ 0.02
VPS25-201ENST00000253794 RNF214Q8ND24 703 aa15.15■□□□□ 0.02
VPS25-201ENST00000253794 HASPINQ8TF76 798 aa15.15■□□□□ 0.02
VPS25-201ENST00000253794 PIK3R5Q8WYR1 880 aa15.15■□□□□ 0.02
VPS25-201ENST00000253794 ERGIC2Q96RQ1 377 aa15.15■□□□□ 0.02
VPS25-201ENST00000253794 BCO2Q9BYV7 579 aa15.15■□□□□ 0.02
VPS25-201ENST00000253794 RBSNQ9H1K0 784 aa15.15■□□□□ 0.02
VPS25-201ENST00000253794 VPS16Q9H269 839 aa15.15■□□□□ 0.02
VPS25-201ENST00000253794 APOBEC3GQ9HC16 384 aaKnown RBP15.15■□□□□ 0.02
VPS25-201ENST00000253794 DSEQ9UL01 958 aa15.15■□□□□ 0.02
VPS25-201ENST00000253794 MTUS1Q9ULD2 1270 aa15.15■□□□□ 0.02
VPS25-201ENST00000253794 EPOPA6NHQ4 379 aa15.14■□□□□ 0.01
VPS25-201ENST00000253794 GRM6O15303 877 aa15.14■□□□□ 0.01
VPS25-201ENST00000253794 LRRN2O75325 713 aa15.14■□□□□ 0.01
VPS25-201ENST00000253794 OAZ2O95190 189 aa15.14■□□□□ 0.01
VPS25-201ENST00000253794 CTSAP10619 480 aa15.14■□□□□ 0.01
VPS25-201ENST00000253794 P4HA1P13674 534 aa15.14■□□□□ 0.01
VPS25-201ENST00000253794 POU3F3P20264 500 aaPredicted RBP15.14■□□□□ 0.01
VPS25-201ENST00000253794 DNAJB1P25685 340 aa15.14■□□□□ 0.01
VPS25-201ENST00000253794 ASPAP45381 313 aa15.14■□□□□ 0.01
VPS25-201ENST00000253794 FANCCQ00597 558 aa15.14■□□□□ 0.01
VPS25-201ENST00000253794 GCNT1Q02742 428 aa15.14■□□□□ 0.01
VPS25-201ENST00000253794 WDR72Q3MJ13 1102 aa15.14■□□□□ 0.01
VPS25-201ENST00000253794 ZNF667Q5HYK9 610 aa15.14■□□□□ 0.01
VPS25-201ENST00000253794 FKBP15Q5T1M5 1219 aa15.14■□□□□ 0.01
VPS25-201ENST00000253794 FAM171A1Q5VUB5 890 aa15.14■□□□□ 0.01
VPS25-201ENST00000253794 KIAA0319Q5VV43 1072 aa15.14■□□□□ 0.01
VPS25-201ENST00000253794 PDXDC1Q6P996 788 aa15.14■□□□□ 0.01
VPS25-201ENST00000253794 TRIM65Q6PJ69 517 aa15.14■□□□□ 0.01
VPS25-201ENST00000253794 SARM1Q6SZW1 724 aa15.14■□□□□ 0.01
VPS25-201ENST00000253794 TAS1R1Q7RTX1 841 aa15.14■□□□□ 0.01
VPS25-201ENST00000253794 VPS52Q8N1B4 723 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms