RNA–Protein interactions for RNA: ENST00000253754.7

PDLIM4-201, Transcript of PDZ and LIM domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM4, Length 2,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-201ENST00000253754 TOMM70O94826 608 aa19.93■□□□□ 0.78
PDLIM4-201ENST00000253754 TXNP10599 105 aaKnown RBP19.93■□□□□ 0.78
PDLIM4-201ENST00000253754 LAMTOR4Q0VGL1 99 aa19.93■□□□□ 0.78
PDLIM4-201ENST00000253754 CCDC113Q9H0I3 377 aa19.93■□□□□ 0.78
PDLIM4-201ENST00000253754 AVENQ9NQS1 362 aaPredicted RBP19.93■□□□□ 0.78
PDLIM4-201ENST00000253754 ANKRD65E5RJM6 399 aa19.92■□□□□ 0.78
PDLIM4-201ENST00000253754 THAP12O43422 761 aa19.92■□□□□ 0.78
PDLIM4-201ENST00000253754 SHBGP04278 402 aa19.92■□□□□ 0.78
PDLIM4-201ENST00000253754 BPIFB4P59827 614 aa19.92■□□□□ 0.78
PDLIM4-201ENST00000253754 NOMO3P69849 1222 aa19.92■□□□□ 0.78
PDLIM4-201ENST00000253754 SNX1Q13596 522 aa19.92■□□□□ 0.78
PDLIM4-201ENST00000253754 TAF1CQ15572 869 aaPredicted RBP19.92■□□□□ 0.78
PDLIM4-201ENST00000253754 CYP1B1Q16678 543 aa19.92■□□□□ 0.78
PDLIM4-201ENST00000253754 CELF3Q5SZQ8 465 aaKnown RBP19.92■□□□□ 0.78
PDLIM4-201ENST00000253754 CCDC62Q6P9F0 684 aa19.92■□□□□ 0.78
PDLIM4-201ENST00000253754 MMS22LQ6ZRQ5 1243 aa19.92■□□□□ 0.78
PDLIM4-201ENST00000253754 CDR2LQ86X02 465 aaPredicted RBP19.92■□□□□ 0.78
PDLIM4-201ENST00000253754 ATG4AQ8WYN0 398 aa19.92■□□□□ 0.78
PDLIM4-201ENST00000253754 ZIC5Q96T25 663 aa19.92■□□□□ 0.78
PDLIM4-201ENST00000253754 MTUS1Q9ULD2 1270 aa19.92■□□□□ 0.78
PDLIM4-201ENST00000253754 LOC102724159A0A0B4J2E5 919 aa19.92■□□□□ 0.78
PDLIM4-201ENST00000253754 NOP56O00567 594 aaKnown RBP19.92■□□□□ 0.78
PDLIM4-201ENST00000253754 CCT5P48643 541 aa19.92■□□□□ 0.78
PDLIM4-201ENST00000253754 PWP2Q15269 919 aaKnown RBP19.92■□□□□ 0.78
PDLIM4-201ENST00000253754 BRSK2Q8IWQ3 736 aa19.92■□□□□ 0.78
PDLIM4-201ENST00000253754 DHX37Q8IY37 1157 aaKnown RBP19.92■□□□□ 0.78
PDLIM4-201ENST00000253754 C1orf131Q8NDD1 294 aaKnown RBP19.92■□□□□ 0.78
PDLIM4-201ENST00000253754 CD58P19256 250 aa19.91■□□□□ 0.78
PDLIM4-201ENST00000253754 ZPBP2Q6X784 338 aa19.91■□□□□ 0.78
PDLIM4-201ENST00000253754 PLEKHH3Q7Z736 793 aa19.91■□□□□ 0.78
PDLIM4-201ENST00000253754 RHPN2Q8IUC4 686 aa19.91■□□□□ 0.78
PDLIM4-201ENST00000253754 MRPL4Q9BYD3 311 aaKnown RBP19.91■□□□□ 0.78
PDLIM4-201ENST00000253754 ADAM22Q9P0K1 906 aa19.91■□□□□ 0.78
PDLIM4-201ENST00000253754 RRP15Q9Y3B9 282 aaKnown RBP19.91■□□□□ 0.78
PDLIM4-201ENST00000253754 TOM1L1O75674 476 aa19.91■□□□□ 0.78
PDLIM4-201ENST00000253754 PRKCBP05771 671 aa19.91■□□□□ 0.78
PDLIM4-201ENST00000253754 MYBL1P10243 752 aa19.91■□□□□ 0.78
PDLIM4-201ENST00000253754 MYL6P60660 151 aa19.91■□□□□ 0.78
PDLIM4-201ENST00000253754 OSTNP61366 133 aa19.91■□□□□ 0.78
PDLIM4-201ENST00000253754 GRB14Q14449 540 aa19.91■□□□□ 0.78
PDLIM4-201ENST00000253754 TTLL4Q14679 1199 aa19.91■□□□□ 0.78
PDLIM4-201ENST00000253754 ZNF394Q53GI3 561 aa19.91■□□□□ 0.78
PDLIM4-201ENST00000253754 SRLQ86TD4 932 aa19.91■□□□□ 0.78
PDLIM4-201ENST00000253754 SPATA33Q96N06 139 aa19.91■□□□□ 0.78
PDLIM4-201ENST00000253754 ACO2Q99798 780 aaKnown RBP19.91■□□□□ 0.78
PDLIM4-201ENST00000253754 CHST7Q9NS84 486 aa19.91■□□□□ 0.78
PDLIM4-201ENST00000253754 PMS2P54278 862 aa19.9■□□□□ 0.78
PDLIM4-201ENST00000253754 DRG2P55039 364 aaKnown RBP19.9■□□□□ 0.78
PDLIM4-201ENST00000253754 MAMLD1Q13495 774 aa19.9■□□□□ 0.78
PDLIM4-201ENST00000253754 PLCB4Q15147 1175 aa19.9■□□□□ 0.78
PDLIM4-201ENST00000253754 KRT71Q3SY84 523 aa19.9■□□□□ 0.78
PDLIM4-201ENST00000253754 CDCA2Q69YH5 1023 aaPredicted RBP19.9■□□□□ 0.78
PDLIM4-201ENST00000253754 TMEM130Q8N3G9 435 aa19.9■□□□□ 0.78
PDLIM4-201ENST00000253754 DDX27Q96GQ7 796 aaKnown RBP19.9■□□□□ 0.78
PDLIM4-201ENST00000253754 NLRP4Q96MN2 994 aa19.9■□□□□ 0.78
PDLIM4-201ENST00000253754 ABLIM1O14639 778 aa19.9■□□□□ 0.78
PDLIM4-201ENST00000253754 FSCN2O14926 492 aa19.9■□□□□ 0.78
PDLIM4-201ENST00000253754 B4GALT5O43286 388 aa19.9■□□□□ 0.78
PDLIM4-201ENST00000253754 SLC10A3P09131 477 aa19.9■□□□□ 0.78
PDLIM4-201ENST00000253754 LSP1P33241 339 aa19.9■□□□□ 0.78
PDLIM4-201ENST00000253754 GJC1P36383 396 aa19.9■□□□□ 0.78
PDLIM4-201ENST00000253754 TAS2R40P59535 323 aa19.9■□□□□ 0.78
PDLIM4-201ENST00000253754 IFFO1Q0D2I5 559 aa19.9■□□□□ 0.78
PDLIM4-201ENST00000253754 SGO2Q562F6 1265 aa19.9■□□□□ 0.78
PDLIM4-201ENST00000253754 IER5Q5VY09 327 aa19.9■□□□□ 0.78
PDLIM4-201ENST00000253754 RNF25Q96BH1 459 aaPredicted RBP19.9■□□□□ 0.78
PDLIM4-201ENST00000253754 TRIM11Q96F44 468 aa19.9■□□□□ 0.78
PDLIM4-201ENST00000253754 FAM118BQ9BPY3 351 aa19.9■□□□□ 0.78
PDLIM4-201ENST00000253754 HEMGNQ9BXL5 484 aa19.9■□□□□ 0.78
PDLIM4-201ENST00000253754 NOVA2Q9UNW9 492 aaKnown RBP19.9■□□□□ 0.78
PDLIM4-201ENST00000253754 HTTP42858 3142 aa19.89■□□□□ 0.78
PDLIM4-201ENST00000253754 PODXLO00592 558 aa19.89■□□□□ 0.77
PDLIM4-201ENST00000253754 TBXAS1P24557 533 aaPredicted RBP19.89■□□□□ 0.77
PDLIM4-201ENST00000253754 EFNA5P52803 228 aa19.89■□□□□ 0.77
PDLIM4-201ENST00000253754 PTP4A2Q12974 167 aa19.89■□□□□ 0.77
PDLIM4-201ENST00000253754 GJC2Q5T442 439 aaPredicted RBP19.89■□□□□ 0.77
PDLIM4-201ENST00000253754 EMC10Q5UCC4 262 aa19.89■□□□□ 0.77
PDLIM4-201ENST00000253754 SCARA5Q6ZMJ2 495 aa19.89■□□□□ 0.77
PDLIM4-201ENST00000253754 IFNL1Q8IU54 200 aa19.89■□□□□ 0.77
PDLIM4-201ENST00000253754 CEP120Q8N960 986 aa19.89■□□□□ 0.77
PDLIM4-201ENST00000253754 C12orf50Q8NA57 414 aaPredicted RBP19.89■□□□□ 0.77
PDLIM4-201ENST00000253754 UHMK1Q8TAS1 419 aaKnown RBP19.89■□□□□ 0.77
PDLIM4-201ENST00000253754 FAM167AQ96KS9 214 aa19.89■□□□□ 0.77
PDLIM4-201ENST00000253754 CNTN6Q9UQ52 1028 aa19.89■□□□□ 0.77
PDLIM4-201ENST00000253754 USTQ9Y2C2 406 aa19.89■□□□□ 0.77
PDLIM4-201ENST00000253754 R3HDM2Q9Y2K5 976 aaKnown RBP19.89■□□□□ 0.77
PDLIM4-201ENST00000253754 TLL2Q9Y6L7 1015 aa19.89■□□□□ 0.77
PDLIM4-201ENST00000253754 LGR5O75473 907 aa19.88■□□□□ 0.77
PDLIM4-201ENST00000253754 PROSCO94903 275 aa19.88■□□□□ 0.77
PDLIM4-201ENST00000253754 ERLIN2O94905 339 aa19.88■□□□□ 0.77
PDLIM4-201ENST00000253754 ECEL1O95672 775 aa19.88■□□□□ 0.77
PDLIM4-201ENST00000253754 ASS1P00966 412 aaKnown RBP19.88■□□□□ 0.77
PDLIM4-201ENST00000253754 FNTAP49354 379 aa19.88■□□□□ 0.77
PDLIM4-201ENST00000253754 MAPK6Q16659 721 aa19.88■□□□□ 0.77
PDLIM4-201ENST00000253754 CYP4F22Q6NT55 531 aa19.88■□□□□ 0.77
PDLIM4-201ENST00000253754 TAPT1Q6NXT6 567 aa19.88■□□□□ 0.77
PDLIM4-201ENST00000253754 RUFY4Q6ZNE9 571 aa19.88■□□□□ 0.77
PDLIM4-201ENST00000253754 WDR49Q8IV35 697 aa19.88■□□□□ 0.77
PDLIM4-201ENST00000253754 THNSL1Q8IYQ7 743 aa19.88■□□□□ 0.77
PDLIM4-201ENST00000253754 SEMA4AQ9H3S1 761 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms