RNA–Protein interactions for RNA: ENST00000248139.7

RAB40C-201, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40C, Length 2,699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-201ENST00000248139 ZC3H11AO75152 810 aaKnown RBP eCLIP27.13■■□□□ 1.93
RAB40C-201ENST00000248139 SLC1A1P43005 524 aa27.13■■□□□ 1.93
RAB40C-201ENST00000248139 MIS18BP1Q6P0N0 1132 aa27.13■■□□□ 1.93
RAB40C-201ENST00000248139 RHOT1Q8IXI2 618 aa27.13■■□□□ 1.93
RAB40C-201ENST00000248139 TMEM130Q8N3G9 435 aa27.13■■□□□ 1.93
RAB40C-201ENST00000248139 ARID2Q68CP9 1835 aa27.13■■□□□ 1.93
RAB40C-201ENST00000248139 CLDN10P78369 228 aa27.13■■□□□ 1.93
RAB40C-201ENST00000248139 CYB5D1Q6P9G0 228 aa27.13■■□□□ 1.93
RAB40C-201ENST00000248139 MRRFQ96E11 262 aaKnown RBP27.13■■□□□ 1.93
RAB40C-201ENST00000248139 PICK1Q9NRD5 415 aa27.13■■□□□ 1.93
RAB40C-201ENST00000248139 SPATA31C2B4DYI2 1134 aa27.12■■□□□ 1.93
RAB40C-201ENST00000248139 FAM182AQ5T1J6 154 aa27.12■■□□□ 1.93
RAB40C-201ENST00000248139 LIN9Q5TKA1 542 aa27.12■■□□□ 1.93
RAB40C-201ENST00000248139 DEFB132Q7Z7B7 95 aa27.12■■□□□ 1.93
RAB40C-201ENST00000248139 SRRM1Q8IYB3 904 aaKnown RBP27.12■■□□□ 1.93
RAB40C-201ENST00000248139 SCYL3Q8IZE3 742 aa27.12■■□□□ 1.93
RAB40C-201ENST00000248139 TRAIPQ9BWF2 469 aa27.12■■□□□ 1.93
RAB40C-201ENST00000248139 ZNF302Q9NR11 478 aa27.12■■□□□ 1.93
RAB40C-201ENST00000248139 MAFGO15525 162 aa27.12■■□□□ 1.93
RAB40C-201ENST00000248139 ASAP2O43150 1006 aa27.12■■□□□ 1.93
RAB40C-201ENST00000248139 P3H1Q32P28 736 aa27.12■■□□□ 1.93
RAB40C-201ENST00000248139 DLK2Q6UY11 383 aa27.12■■□□□ 1.93
RAB40C-201ENST00000248139 EEPD1Q7L9B9 569 aa27.12■■□□□ 1.93
RAB40C-201ENST00000248139 ANKS4BQ8N8V4 417 aa27.12■■□□□ 1.93
RAB40C-201ENST00000248139 ROPN1BQ9BZX4 212 aaPredicted RBP27.12■■□□□ 1.93
RAB40C-201ENST00000248139 ROPN1Q9HAT0 212 aaPredicted RBP27.12■■□□□ 1.93
RAB40C-201ENST00000248139 NEU2Q9Y3R4 380 aa27.12■■□□□ 1.93
RAB40C-201ENST00000248139 CLTAP09496 248 aa27.11■■□□□ 1.93
RAB40C-201ENST00000248139 BRAFP15056 766 aa27.11■■□□□ 1.93
RAB40C-201ENST00000248139 PTP4A2Q12974 167 aa27.11■■□□□ 1.93
RAB40C-201ENST00000248139 NUGGCQ68CJ6 796 aa27.11■■□□□ 1.93
RAB40C-201ENST00000248139 STMN4Q9H169 189 aaPredicted RBP27.11■■□□□ 1.93
RAB40C-201ENST00000248139 DNPEPQ9ULA0 475 aa27.11■■□□□ 1.93
RAB40C-201ENST00000248139 GSTTP1A0A1W2PQM5 241 aa27.11■■□□□ 1.93
RAB40C-201ENST00000248139 F8VP50 259 aa27.11■■□□□ 1.93
RAB40C-201ENST00000248139 MYBL1P10243 752 aa27.11■■□□□ 1.93
RAB40C-201ENST00000248139 BPIFB4P59827 614 aa27.11■■□□□ 1.93
RAB40C-201ENST00000248139 NCOA4Q13772 614 aa27.11■■□□□ 1.93
RAB40C-201ENST00000248139 LACTB2Q53H82 288 aaPredicted RBP27.11■■□□□ 1.93
RAB40C-201ENST00000248139 XRRA1Q6P2D8 792 aa27.11■■□□□ 1.93
RAB40C-201ENST00000248139 ZNF677Q86XU0 584 aa27.11■■□□□ 1.93
RAB40C-201ENST00000248139 GADD45GIP1Q8TAE8 222 aaPredicted RBP27.11■■□□□ 1.93
RAB40C-201ENST00000248139 FAM81BQ96LP2 452 aa27.11■■□□□ 1.93
RAB40C-201ENST00000248139 C10orf88Q9H8K7 445 aa27.11■■□□□ 1.93
RAB40C-201ENST00000248139 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP27.11■■□□□ 1.934e-8■■■■□ 20
RAB40C-201ENST00000248139 NAALADL1Q9UQQ1 740 aa27.11■■□□□ 1.93
RAB40C-201ENST00000248139 DYNC1LI1Q9Y6G9 523 aaKnown RBP27.11■■□□□ 1.93
RAB40C-201ENST00000248139 BRD2P25440 801 aaKnown RBP27.1■■□□□ 1.93
RAB40C-201ENST00000248139 ZNF606Q8WXB4 792 aa27.1■■□□□ 1.93
RAB40C-201ENST00000248139 PORCNQ9H237 461 aa27.1■■□□□ 1.93
RAB40C-201ENST00000248139 KDM4CQ9H3R0 1056 aa27.1■■□□□ 1.93
RAB40C-201ENST00000248139 HOMER3Q9NSC5 361 aa27.1■■□□□ 1.93
RAB40C-201ENST00000248139 OATP04181 439 aa27.1■■□□□ 1.93
RAB40C-201ENST00000248139 RTP1P59025 263 aa27.1■■□□□ 1.93
RAB40C-201ENST00000248139 PLCB4Q15147 1175 aa27.1■■□□□ 1.93
RAB40C-201ENST00000248139 MFSD7Q6UXD7 560 aa27.1■■□□□ 1.93
RAB40C-201ENST00000248139 SCARA5Q6ZMJ2 495 aa27.1■■□□□ 1.93
RAB40C-201ENST00000248139 DHX37Q8IY37 1157 aaKnown RBP27.1■■□□□ 1.93
RAB40C-201ENST00000248139 GRK7Q8WTQ7 553 aa27.1■■□□□ 1.93
RAB40C-201ENST00000248139 SERPINB12Q96P63 405 aa27.1■■□□□ 1.93
RAB40C-201ENST00000248139 TCHPQ9BT92 498 aa27.1■■□□□ 1.93
RAB40C-201ENST00000248139 ACAD9Q9H845 621 aa27.1■■□□□ 1.93
RAB40C-201ENST00000248139 IVNS1ABPQ9Y6Y0 642 aa27.1■■□□□ 1.93
RAB40C-201ENST00000248139 DKC1O60832 514 aaKnown RBP eCLIP27.09■■□□□ 1.93
RAB40C-201ENST00000248139 ZNF280AP59817 542 aaPredicted RBP27.09■■□□□ 1.93
RAB40C-201ENST00000248139 MTM1Q13496 603 aa27.09■■□□□ 1.93
RAB40C-201ENST00000248139 FASTKD3Q14CZ7 662 aaKnown RBP27.09■■□□□ 1.93
RAB40C-201ENST00000248139 FAM228AQ86W67 206 aa27.09■■□□□ 1.93
RAB40C-201ENST00000248139 CDR2LQ86X02 465 aaPredicted RBP27.09■■□□□ 1.93
RAB40C-201ENST00000248139 TAB3Q8N5C8 712 aaPredicted RBP27.09■■□□□ 1.93
RAB40C-201ENST00000248139 TEX13BQ9BXU2 312 aa27.09■■□□□ 1.93
RAB40C-201ENST00000248139 AGAP1Q9UPQ3 857 aa27.09■■□□□ 1.93
RAB40C-201ENST00000248139 CNTNAP2Q9UHC6 1331 aa27.09■■□□□ 1.93
RAB40C-201ENST00000248139 NFKBIEO00221 500 aa27.09■■□□□ 1.93
RAB40C-201ENST00000248139 OGDHQ02218 1023 aa27.09■■□□□ 1.93
RAB40C-201ENST00000248139 ZNF252P-AS1Q0IIN9 211 aa27.09■■□□□ 1.93
RAB40C-201ENST00000248139 GNPTABQ3T906 1256 aa27.09■■□□□ 1.93
RAB40C-201ENST00000248139 PLEKHA7Q6IQ23 1121 aa27.09■■□□□ 1.93
RAB40C-201ENST00000248139 TRIM11Q96F44 468 aa27.09■■□□□ 1.93
RAB40C-201ENST00000248139 MCEEQ96PE7 176 aa27.09■■□□□ 1.93
RAB40C-201ENST00000248139 PIM2Q9P1W9 311 aa27.09■■□□□ 1.93
RAB40C-201ENST00000248139 SNX3O60493 162 aa27.08■■□□□ 1.93
RAB40C-201ENST00000248139 NFX1Q12986 1120 aaKnown RBP27.08■■□□□ 1.93
RAB40C-201ENST00000248139 CCNG2Q16589 344 aa27.08■■□□□ 1.93
RAB40C-201ENST00000248139 CYP4A22Q5TCH4 519 aa27.08■■□□□ 1.93
RAB40C-201ENST00000248139 HIBCHQ6NVY1 386 aaPredicted RBP27.08■■□□□ 1.93
RAB40C-201ENST00000248139 FEZF2Q8TBJ5 459 aa27.08■■□□□ 1.93
RAB40C-201ENST00000248139 SLC7A3Q8WY07 619 aa27.08■■□□□ 1.93
RAB40C-201ENST00000248139 THOC1Q96FV9 657 aaKnown RBP27.08■■□□□ 1.93
RAB40C-201ENST00000248139 MTMR12Q9C0I1 747 aa27.08■■□□□ 1.93
RAB40C-201ENST00000248139 KIAA1586Q9HCI6 787 aa27.08■■□□□ 1.93
RAB40C-201ENST00000248139 SAE1Q9UBE0 346 aaPredicted RBP27.08■■□□□ 1.93
RAB40C-201ENST00000248139 TNS1Q9HBL0 1735 aaKnown RBP27.08■■□□□ 1.93
RAB40C-201ENST00000248139 PIAS1O75925 651 aa27.08■■□□□ 1.93
RAB40C-201ENST00000248139 WEE2P0C1S8 567 aa27.08■■□□□ 1.93
RAB40C-201ENST00000248139 TRPM8Q7Z2W7 1104 aa27.08■■□□□ 1.93
RAB40C-201ENST00000248139 CROCCP2Q86T23 111 aa27.08■■□□□ 1.93
RAB40C-201ENST00000248139 RBM15Q96T37 977 aaKnown RBP eCLIP27.08■■□□□ 1.931e-6■■■■■ 29.9
RAB40C-201ENST00000248139 PAIP2Q9BPZ3 127 aaKnown RBP27.08■■□□□ 1.93
RAB40C-201ENST00000248139 DHX33Q9H6R0 707 aaKnown RBP27.08■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms