RNA–Protein interactions for RNA: ENST00000247020.8

SDF2-201, Transcript of stromal cell derived factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2, Length 1,568 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-201ENST00000247020 PCDHB18PQ96TA0 734 aa15.18■□□□□ 0.02
SDF2-201ENST00000247020 CISHQ9NSE2 258 aa15.18■□□□□ 0.02
SDF2-201ENST00000247020 ST3GAL5Q9UNP4 418 aa15.18■□□□□ 0.02
SDF2-201ENST00000247020 PTPN22Q9Y2R2 807 aa15.18■□□□□ 0.02
SDF2-201ENST00000247020 SAR1BQ9Y6B6 198 aa15.18■□□□□ 0.02
SDF2-201ENST00000247020 KBTBD13C9JR72 458 aa15.17■□□□□ 0.02
SDF2-201ENST00000247020 BUB1O43683 1085 aa15.17■□□□□ 0.02
SDF2-201ENST00000247020 FTLP02792 175 aaPredicted RBP15.17■□□□□ 0.02
SDF2-201ENST00000247020 CYP1A1P04798 512 aaPredicted RBP15.17■□□□□ 0.02
SDF2-201ENST00000247020 PAEPP09466 180 aa15.17■□□□□ 0.02
SDF2-201ENST00000247020 UNGP13051 313 aaPredicted RBP15.17■□□□□ 0.02
SDF2-201ENST00000247020 THPOP40225 353 aa15.17■□□□□ 0.02
SDF2-201ENST00000247020 GPC5P78333 572 aa15.17■□□□□ 0.02
SDF2-201ENST00000247020 WDR72Q3MJ13 1102 aa15.17■□□□□ 0.02
SDF2-201ENST00000247020 FBXO47Q5MNV8 452 aa15.17■□□□□ 0.02
SDF2-201ENST00000247020 TAF3Q5VWG9 929 aa15.17■□□□□ 0.02
SDF2-201ENST00000247020 ACAD10Q6JQN1 1059 aa15.17■□□□□ 0.02
SDF2-201ENST00000247020 PALB2Q86YC2 1186 aa15.17■□□□□ 0.02
SDF2-201ENST00000247020 SMG8Q8ND04 991 aaKnown RBP15.17■□□□□ 0.02
SDF2-201ENST00000247020 ELMO3Q96BJ8 720 aa15.17■□□□□ 0.02
SDF2-201ENST00000247020 HPDLQ96IR7 371 aa15.17■□□□□ 0.02
SDF2-201ENST00000247020 STARD7Q9NQZ5 370 aa15.17■□□□□ 0.02
SDF2-201ENST00000247020 AGAP1Q9UPQ3 857 aa15.17■□□□□ 0.02
SDF2-201ENST00000247020 DYNC1I1O14576 645 aa15.16■□□□□ 0.02
SDF2-201ENST00000247020 MTA2O94776 668 aa15.16■□□□□ 0.02
SDF2-201ENST00000247020 ATP1A1P05023 1023 aaKnown RBP15.16■□□□□ 0.02
SDF2-201ENST00000247020 MYBL1P10243 752 aa15.16■□□□□ 0.02
SDF2-201ENST00000247020 ZSCAN20P17040 1043 aaPredicted RBP15.16■□□□□ 0.02
SDF2-201ENST00000247020 ATF7P17544 494 aaPredicted RBP15.16■□□□□ 0.02
SDF2-201ENST00000247020 TCP1P17987 556 aaKnown RBP15.16■□□□□ 0.02
SDF2-201ENST00000247020 PNPLA4P41247 253 aa15.16■□□□□ 0.02
SDF2-201ENST00000247020 CENPCQ03188 943 aa15.16■□□□□ 0.02
SDF2-201ENST00000247020 MNS1Q8NEH6 495 aa15.16■□□□□ 0.02
SDF2-201ENST00000247020 TPCN2Q8NHX9 752 aa15.16■□□□□ 0.02
SDF2-201ENST00000247020 VCPIP1Q96JH7 1222 aa15.16■□□□□ 0.02
SDF2-201ENST00000247020 ERVK-5Q9HDB9 667 aa15.16■□□□□ 0.02
SDF2-201ENST00000247020 FAM105AQ9NUU6 356 aa15.16■□□□□ 0.02
SDF2-201ENST00000247020 TAS2R14Q9NYV8 317 aa15.16■□□□□ 0.02
SDF2-201ENST00000247020 GTF3C4Q9UKN8 822 aa15.16■□□□□ 0.02
SDF2-201ENST00000247020 TMCO5BA8MYB1 307 aa15.15■□□□□ 0.02
SDF2-201ENST00000247020 ARVCFO00192 962 aa15.15■□□□□ 0.02
SDF2-201ENST00000247020 DNM1LO00429 736 aa15.15■□□□□ 0.02
SDF2-201ENST00000247020 TLR3O15455 904 aaKnown RBP15.15■□□□□ 0.02
SDF2-201ENST00000247020 ZNF623O75123 536 aa15.15■□□□□ 0.02
SDF2-201ENST00000247020 PALMO75781 387 aa15.15■□□□□ 0.02
SDF2-201ENST00000247020 LSM8O95777 96 aaKnown RBP15.15■□□□□ 0.02
SDF2-201ENST00000247020 CTSHP09668 335 aa15.15■□□□□ 0.02
SDF2-201ENST00000247020 SKIP12755 728 aa15.15■□□□□ 0.02
SDF2-201ENST00000247020 NOP2P46087 812 aaKnown RBP15.15■□□□□ 0.02
SDF2-201ENST00000247020 TNNC1P63316 161 aa15.15■□□□□ 0.02
SDF2-201ENST00000247020 INCA1Q0VD86 236 aa15.15■□□□□ 0.02
SDF2-201ENST00000247020 PAK2Q13177 524 aa15.15■□□□□ 0.02
SDF2-201ENST00000247020 MEI1Q5TIA1 1274 aa15.15■□□□□ 0.02
SDF2-201ENST00000247020 SLFN11Q7Z7L1 901 aa15.15■□□□□ 0.02
SDF2-201ENST00000247020 LRRC57Q8N9N7 239 aa15.15■□□□□ 0.02
SDF2-201ENST00000247020 ZNF606Q8WXB4 792 aa15.15■□□□□ 0.02
SDF2-201ENST00000247020 ZNF560Q96MR9 790 aa15.15■□□□□ 0.02
SDF2-201ENST00000247020 ZMAT2Q96NC0 199 aaKnown RBP15.15■□□□□ 0.02
SDF2-201ENST00000247020 ZNF518BQ9C0D4 1074 aa15.15■□□□□ 0.02
SDF2-201ENST00000247020 ACP6Q9NPH0 428 aa15.15■□□□□ 0.02
SDF2-201ENST00000247020 PAK6Q9NQU5 681 aaPredicted RBP15.15■□□□□ 0.02
SDF2-201ENST00000247020 UVRAGQ9P2Y5 699 aa15.15■□□□□ 0.02
SDF2-201ENST00000247020 PARP2Q9UGN5 583 aa15.15■□□□□ 0.02
SDF2-201ENST00000247020 SNX12Q9UMY4 172 aa15.15■□□□□ 0.02
SDF2-201ENST00000247020 PCDHGC3Q9UN70 934 aa15.15■□□□□ 0.02
SDF2-201ENST00000247020 HYOU1Q9Y4L1 999 aa15.15■□□□□ 0.02
SDF2-201ENST00000247020 SCN1AP35498 2009 aa15.15■□□□□ 0.02
SDF2-201ENST00000247020 SMIM28A0A1B0GU29 152 aa15.15■□□□□ 0.02
SDF2-201ENST00000247020 GRID2IPA4D2P6 1211 aa15.15■□□□□ 0.02
SDF2-201ENST00000247020 EFCAB8A8MWE9 144 aa15.15■□□□□ 0.02
SDF2-201ENST00000247020 MED7O43513 233 aa15.15■□□□□ 0.02
SDF2-201ENST00000247020 SCARA3Q6AZY7 606 aa15.15■□□□□ 0.02
SDF2-201ENST00000247020 MRPL10Q7Z7H8 261 aaKnown RBP15.15■□□□□ 0.02
SDF2-201ENST00000247020 SLC35G2Q8TBE7 412 aa15.15■□□□□ 0.02
SDF2-201ENST00000247020 CAGE1Q8TC20 777 aa15.15■□□□□ 0.02
SDF2-201ENST00000247020 RPGRIP1Q96KN7 1286 aa15.15■□□□□ 0.02
SDF2-201ENST00000247020 THAP2Q9H0W7 228 aa15.15■□□□□ 0.02
SDF2-201ENST00000247020 PDCL3Q9H2J4 239 aa15.15■□□□□ 0.02
SDF2-201ENST00000247020 AVENQ9NQS1 362 aaPredicted RBP15.15■□□□□ 0.02
SDF2-201ENST00000247020 TRMT13Q9NUP7 481 aaKnown RBP15.15■□□□□ 0.02
SDF2-201ENST00000247020 SLC38A7Q9NVC3 462 aa15.15■□□□□ 0.02
SDF2-201ENST00000247020 RNF14Q9UBS8 474 aa15.15■□□□□ 0.02
SDF2-201ENST00000247020 NXF1Q9UBU9 619 aaKnown RBP15.15■□□□□ 0.02
SDF2-201ENST00000247020 GIT1Q9Y2X7 761 aa15.15■□□□□ 0.02
SDF2-201ENST00000247020 HES2Q9Y543 173 aa15.15■□□□□ 0.02
SDF2-201ENST00000247020 CES2O00748 559 aa15.14■□□□□ 0.01
SDF2-201ENST00000247020 ENC1O14682 589 aa15.14■□□□□ 0.01
SDF2-201ENST00000247020 THAP12O43422 761 aa15.14■□□□□ 0.01
SDF2-201ENST00000247020 CILPO75339 1184 aa15.14■□□□□ 0.01
SDF2-201ENST00000247020 CYP1A2P05177 515 aa15.14■□□□□ 0.01
SDF2-201ENST00000247020 WEE2P0C1S8 567 aa15.14■□□□□ 0.01
SDF2-201ENST00000247020 ITGA4P13612 1032 aa15.14■□□□□ 0.01
SDF2-201ENST00000247020 CD58P19256 250 aa15.14■□□□□ 0.01
SDF2-201ENST00000247020 ABCB4P21439 1286 aa15.14■□□□□ 0.01
SDF2-201ENST00000247020 AKAP5P24588 427 aa15.14■□□□□ 0.01
SDF2-201ENST00000247020 LRPAP1P30533 357 aa15.14■□□□□ 0.01
SDF2-201ENST00000247020 CDH5P33151 784 aaPredicted RBP15.14■□□□□ 0.01
SDF2-201ENST00000247020 NSFP46459 744 aaKnown RBP15.14■□□□□ 0.01
SDF2-201ENST00000247020 NOMO3P69849 1222 aa15.14■□□□□ 0.01
SDF2-201ENST00000247020 CKAP4Q07065 602 aaKnown RBP15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms