RNA–Protein interactions for RNA: ENST00000244303.10

HIF3A-202, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,250 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-202ENST00000244303 HOXC10Q9NYD6 342 aa15.29■□□□□ 0.04
HIF3A-202ENST00000244303 RBAKQ9NYW8 714 aaPredicted RBP15.29■□□□□ 0.04
HIF3A-202ENST00000244303 SAMD15Q9P1V8 674 aa15.29■□□□□ 0.04
HIF3A-202ENST00000244303 ANAPC5Q9UJX4 755 aa15.29■□□□□ 0.04
HIF3A-202ENST00000244303 PPP2R3BQ9Y5P8 575 aa15.29■□□□□ 0.04
HIF3A-202ENST00000244303 STYXL1Q9Y6J8 313 aa15.29■□□□□ 0.04
HIF3A-202ENST00000244303 SRCAPQ6ZRS2 3230 aa15.29■□□□□ 0.04
HIF3A-202ENST00000244303 SSC5DA1L4H1 1573 aa15.28■□□□□ 0.04
HIF3A-202ENST00000244303 SPDYE16A6NNV3 312 aaPredicted RBP15.28■□□□□ 0.04
HIF3A-202ENST00000244303 FOXO6A8MYZ6 492 aa15.28■□□□□ 0.04
HIF3A-202ENST00000244303 THAP12O43422 761 aa15.28■□□□□ 0.04
HIF3A-202ENST00000244303 PSTPIP1O43586 416 aa15.28■□□□□ 0.04
HIF3A-202ENST00000244303 SUPT20HL2P0C7V6 817 aa15.28■□□□□ 0.04
HIF3A-202ENST00000244303 GHRP10912 638 aa15.28■□□□□ 0.04
HIF3A-202ENST00000244303 MAMLD1Q13495 774 aa15.28■□□□□ 0.04
HIF3A-202ENST00000244303 ITIH4Q14624 930 aa15.28■□□□□ 0.04
HIF3A-202ENST00000244303 SUPT20HL1Q3ZLR7 823 aa15.28■□□□□ 0.04
HIF3A-202ENST00000244303 MIS18BP1Q6P0N0 1132 aa15.28■□□□□ 0.04
HIF3A-202ENST00000244303 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.28■□□□□ 0.04
HIF3A-202ENST00000244303 ABRAQ8N0Z2 381 aa15.28■□□□□ 0.04
HIF3A-202ENST00000244303 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.28■□□□□ 0.04
HIF3A-202ENST00000244303 ASAP3Q8TDY4 903 aa15.28■□□□□ 0.04
HIF3A-202ENST00000244303 ZNF526Q8TF50 670 aaPredicted RBP15.28■□□□□ 0.04
HIF3A-202ENST00000244303 CDHR1Q96JP9 859 aa15.28■□□□□ 0.04
HIF3A-202ENST00000244303 HOMER3Q9NSC5 361 aa15.28■□□□□ 0.04
HIF3A-202ENST00000244303 USTQ9Y2C2 406 aa15.28■□□□□ 0.04
HIF3A-202ENST00000244303 NEU2Q9Y3R4 380 aa15.28■□□□□ 0.04
HIF3A-202ENST00000244303 TMEM120BA0PK00 339 aa15.28■□□□□ 0.04
HIF3A-202ENST00000244303 LRRIQ4A6NIV6 560 aa15.28■□□□□ 0.04
HIF3A-202ENST00000244303 SPATA31C2B4DYI2 1134 aa15.28■□□□□ 0.04
HIF3A-202ENST00000244303 GJB6O95452 261 aa15.28■□□□□ 0.04
HIF3A-202ENST00000244303 CD58P19256 250 aa15.28■□□□□ 0.04
HIF3A-202ENST00000244303 ATP4AP20648 1035 aa15.28■□□□□ 0.04
HIF3A-202ENST00000244303 GLRA2P23416 452 aa15.28■□□□□ 0.04
HIF3A-202ENST00000244303 ABCD1P33897 745 aa15.28■□□□□ 0.04
HIF3A-202ENST00000244303 SP2Q02086 613 aa15.28■□□□□ 0.04
HIF3A-202ENST00000244303 CAV1Q03135 178 aa15.28■□□□□ 0.04
HIF3A-202ENST00000244303 VSTM1Q6UX27 236 aa15.28■□□□□ 0.04
HIF3A-202ENST00000244303 ANKS1BQ7Z6G8 1248 aa15.28■□□□□ 0.04
HIF3A-202ENST00000244303 OSBPL8Q9BZF1 889 aa15.28■□□□□ 0.04
HIF3A-202ENST00000244303 CD248Q9HCU0 757 aa15.28■□□□□ 0.04
HIF3A-202ENST00000244303 MRPL47Q9HD33 250 aaKnown RBP15.28■□□□□ 0.04
HIF3A-202ENST00000244303 NINJ2Q9NZG7 142 aa15.28■□□□□ 0.04
HIF3A-202ENST00000244303 ANKFY1Q9P2R3 1169 aa15.28■□□□□ 0.04
HIF3A-202ENST00000244303 UTRNP46939 3433 aa15.28■□□□□ 0.04
HIF3A-202ENST00000244303 USP2O75604 605 aaPredicted RBP15.27■□□□□ 0.04
HIF3A-202ENST00000244303 SSR1P43307 286 aaKnown RBP15.27■□□□□ 0.04
HIF3A-202ENST00000244303 GSCP56915 257 aaPredicted RBP15.27■□□□□ 0.04
HIF3A-202ENST00000244303 GNPTABQ3T906 1256 aa15.27■□□□□ 0.04
HIF3A-202ENST00000244303 TRIM72Q6ZMU5 477 aa15.27■□□□□ 0.04
HIF3A-202ENST00000244303 KATNAL2Q8IYT4 538 aa15.27■□□□□ 0.04
HIF3A-202ENST00000244303 FUKQ8N0W3 1084 aa15.27■□□□□ 0.04
HIF3A-202ENST00000244303 GPC2Q8N158 579 aa15.27■□□□□ 0.04
HIF3A-202ENST00000244303 RBBP8NLQ8NC74 664 aaPredicted RBP15.27■□□□□ 0.04
HIF3A-202ENST00000244303 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.27■□□□□ 0.04
HIF3A-202ENST00000244303 DYDC1Q8WWB3 177 aa15.27■□□□□ 0.04
HIF3A-202ENST00000244303 NSRP1Q9H0G5 558 aaKnown RBP15.27■□□□□ 0.04
HIF3A-202ENST00000244303 K7ERI5 159 aa15.27■□□□□ 0.03
HIF3A-202ENST00000244303 TLR3O15455 904 aaKnown RBP15.27■□□□□ 0.03
HIF3A-202ENST00000244303 EDN1P05305 212 aa15.27■□□□□ 0.03
HIF3A-202ENST00000244303 CLTAP09496 248 aa15.27■□□□□ 0.03
HIF3A-202ENST00000244303 ATP5DP30049 168 aa15.27■□□□□ 0.03
HIF3A-202ENST00000244303 CCNG2Q16589 344 aa15.27■□□□□ 0.03
HIF3A-202ENST00000244303 PLEKHA7Q6IQ23 1121 aa15.27■□□□□ 0.03
HIF3A-202ENST00000244303 ZNF365Q70YC5 407 aa15.27■□□□□ 0.03
HIF3A-202ENST00000244303 PRUNE1Q86TP1 453 aa15.27■□□□□ 0.03
HIF3A-202ENST00000244303 PHF13Q86YI8 300 aaPredicted RBP15.27■□□□□ 0.03
HIF3A-202ENST00000244303 OR5B17Q8NGF7 314 aa15.27■□□□□ 0.03
HIF3A-202ENST00000244303 DEPTORQ8TB45 409 aa15.27■□□□□ 0.03
HIF3A-202ENST00000244303 TARS2Q9BW92 718 aaKnown RBP15.27■□□□□ 0.03
HIF3A-202ENST00000244303 PORCNQ9H237 461 aa15.27■□□□□ 0.03
HIF3A-202ENST00000244303 CXorf56Q9H5V9 222 aa15.27■□□□□ 0.03
HIF3A-202ENST00000244303 KLHL11Q9NVR0 708 aa15.27■□□□□ 0.03
HIF3A-202ENST00000244303 NUB1Q9Y5A7 615 aa15.27■□□□□ 0.03
HIF3A-202ENST00000244303 CHUKO15111 745 aa15.26■□□□□ 0.03
HIF3A-202ENST00000244303 STAM2O75886 525 aa15.26■□□□□ 0.03
HIF3A-202ENST00000244303 POTEJP0CG39 1038 aa15.26■□□□□ 0.03
HIF3A-202ENST00000244303 NAMPTP43490 491 aa15.26■□□□□ 0.03
HIF3A-202ENST00000244303 NOP14P78316 857 aaKnown RBP15.26■□□□□ 0.03
HIF3A-202ENST00000244303 SEZ6Q53EL9 994 aa15.26■□□□□ 0.03
HIF3A-202ENST00000244303 SH3D19Q5HYK7 790 aa15.26■□□□□ 0.03
HIF3A-202ENST00000244303 SCARA3Q6AZY7 606 aa15.26■□□□□ 0.03
HIF3A-202ENST00000244303 CYB5D1Q6P9G0 228 aa15.26■□□□□ 0.03
HIF3A-202ENST00000244303 VCPIP1Q96JH7 1222 aa15.26■□□□□ 0.03
HIF3A-202ENST00000244303 CGRRF1Q99675 332 aa15.26■□□□□ 0.03
HIF3A-202ENST00000244303 MSTO1Q9BUK6 570 aa15.26■□□□□ 0.03
HIF3A-202ENST00000244303 MLXIPLQ9NP71 852 aa15.26■□□□□ 0.03
HIF3A-202ENST00000244303 ZNF302Q9NR11 478 aa15.26■□□□□ 0.03
HIF3A-202ENST00000244303 FBXO40Q9UH90 709 aa15.26■□□□□ 0.03
HIF3A-202ENST00000244303 KCNG1Q9UIX4 513 aa15.26■□□□□ 0.03
HIF3A-202ENST00000244303 SCINQ9Y6U3 715 aa15.26■□□□□ 0.03
HIF3A-202ENST00000244303 DNAJC8O75937 253 aaPredicted RBP15.26■□□□□ 0.03
HIF3A-202ENST00000244303 PIGRP01833 764 aa15.26■□□□□ 0.03
HIF3A-202ENST00000244303 OATP04181 439 aa15.26■□□□□ 0.03
HIF3A-202ENST00000244303 XRCC4Q13426 336 aa15.26■□□□□ 0.03
HIF3A-202ENST00000244303 IZUMO3Q5VZ72 239 aa15.26■□□□□ 0.03
HIF3A-202ENST00000244303 SLFN12LQ6IEE8 588 aa15.26■□□□□ 0.03
HIF3A-202ENST00000244303 TAX1BP1Q86VP1 789 aa15.26■□□□□ 0.03
HIF3A-202ENST00000244303 CCDC89Q8N998 374 aa15.26■□□□□ 0.03
HIF3A-202ENST00000244303 ANKRD42Q8N9B4 389 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms