RNA–Protein interactions for RNA: ENST00000239878.8

UFM1-201, Transcript of ubiquitin fold modifier 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UFM1, Length 3,138 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFM1-201ENST00000239878 PRO3102Q9H379 93 aa3.92□□□□□ -1.78
UFM1-201ENST00000239878 NOD2Q9HC29 1040 aa3.92□□□□□ -1.78
UFM1-201ENST00000239878 PLCB1Q9NQ66 1216 aa3.92□□□□□ -1.78
UFM1-201ENST00000239878 SLC5A4Q9NY91 659 aa3.92□□□□□ -1.78
UFM1-201ENST00000239878 ZNF180Q9UJW8 692 aa3.92□□□□□ -1.78
UFM1-201ENST00000239878 VAV3Q9UKW4 847 aa3.92□□□□□ -1.78
UFM1-201ENST00000239878 ASB3Q9Y575 518 aa3.92□□□□□ -1.78
UFM1-201ENST00000239878 TRIM17Q9Y577 477 aa3.92□□□□□ -1.78
UFM1-201ENST00000239878 PTPRSQ13332 1948 aa3.91□□□□□ -1.78
UFM1-201ENST00000239878 C11orf97A0A1B0GVM6 126 aaPredicted RBP3.91□□□□□ -1.78
UFM1-201ENST00000239878 BECN2A8MW95 431 aa3.91□□□□□ -1.78
UFM1-201ENST00000239878 GCOM1H8Y6P7 765 aaPredicted RBP3.91□□□□□ -1.78
UFM1-201ENST00000239878 LIN7AO14910 233 aaPredicted RBP3.91□□□□□ -1.78
UFM1-201ENST00000239878 NKRFO15226 690 aaKnown RBP eCLIP3.91□□□□□ -1.78
UFM1-201ENST00000239878 CBFA2T2O43439 604 aa3.91□□□□□ -1.78
UFM1-201ENST00000239878 SUPT3HO75486 399 aa3.91□□□□□ -1.78
UFM1-201ENST00000239878 CLTAP09496 248 aa3.91□□□□□ -1.78
UFM1-201ENST00000239878 RHOXF2BP0C7M4 288 aa3.91□□□□□ -1.78
UFM1-201ENST00000239878 POLR2MP0CAP2 368 aa3.91□□□□□ -1.78
UFM1-201ENST00000239878 ALAS1P13196 640 aa3.91□□□□□ -1.78
UFM1-201ENST00000239878 ELNP15502 786 aa3.91□□□□□ -1.78
UFM1-201ENST00000239878 GGCXP38435 758 aa3.91□□□□□ -1.78
UFM1-201ENST00000239878 CDK7P50613 346 aa3.91□□□□□ -1.78
UFM1-201ENST00000239878 CYP4A11Q02928 519 aa3.91□□□□□ -1.78
UFM1-201ENST00000239878 SSRP1Q08945 709 aaKnown RBP3.91□□□□□ -1.78
UFM1-201ENST00000239878 RESTQ13127 1097 aa3.91□□□□□ -1.78
UFM1-201ENST00000239878 ITGB3BPQ13352 177 aaPredicted RBP3.91□□□□□ -1.78
UFM1-201ENST00000239878 ACVR2BQ13705 512 aa3.91□□□□□ -1.78
UFM1-201ENST00000239878 KIF22Q14807 665 aa3.91□□□□□ -1.78
UFM1-201ENST00000239878 ARHGEF6Q15052 776 aa3.91□□□□□ -1.78
UFM1-201ENST00000239878 B4GALNT4Q76KP1 1039 aa3.91□□□□□ -1.78
UFM1-201ENST00000239878 YTHDF3Q7Z739 585 aaKnown RBP3.91□□□□□ -1.78
UFM1-201ENST00000239878 RNF168Q8IYW5 571 aaPredicted RBP3.91□□□□□ -1.78
UFM1-201ENST00000239878 LINC01465Q8N7H1 131 aa3.91□□□□□ -1.78
UFM1-201ENST00000239878 MSANTD4Q8NCY6 345 aa3.91□□□□□ -1.78
UFM1-201ENST00000239878 ST13P5Q8NFI4 369 aaPredicted RBP3.91□□□□□ -1.78
UFM1-201ENST00000239878 ERMNQ8TAM6 284 aa3.91□□□□□ -1.78
UFM1-201ENST00000239878 FAM76AQ8TAV0 307 aa3.91□□□□□ -1.78
UFM1-201ENST00000239878 NSUN6Q8TEA1 469 aaKnown RBP3.91□□□□□ -1.78
UFM1-201ENST00000239878 MAIP1Q8WWC4 291 aa3.91□□□□□ -1.78
UFM1-201ENST00000239878 KHSRPQ92945 711 aaKnown RBP eCLIP3.91□□□□□ -1.787e-9■■□□□ 12.6
UFM1-201ENST00000239878 HVCN1Q96D96 273 aa3.91□□□□□ -1.78
UFM1-201ENST00000239878 DTNBP1Q96EV8 351 aa3.91□□□□□ -1.78
UFM1-201ENST00000239878 RHOXF2Q9BQY4 288 aa3.91□□□□□ -1.78
UFM1-201ENST00000239878 ANO3Q9BYT9 981 aa3.91□□□□□ -1.78
UFM1-201ENST00000239878 NAT10Q9H0A0 1025 aaKnown RBP3.91□□□□□ -1.78
UFM1-201ENST00000239878 ABHD16BQ9H3Z7 469 aa3.91□□□□□ -1.78
UFM1-201ENST00000239878 PSTPIP2Q9H939 334 aa3.91□□□□□ -1.78
UFM1-201ENST00000239878 TCF7L1Q9HCS4 588 aa3.91□□□□□ -1.78
UFM1-201ENST00000239878 POLD4Q9HCU8 107 aa3.91□□□□□ -1.78
UFM1-201ENST00000239878 IGSF9BQ9UPX0 1349 aa3.91□□□□□ -1.78
UFM1-201ENST00000239878 CENPFP49454 3210 aa3.91□□□□□ -1.78
UFM1-201ENST00000239878 hCG_1642624A0A1W2PR95 340 aa3.91□□□□□ -1.78
UFM1-201ENST00000239878 A0A1W2PRQ8 180 aa3.91□□□□□ -1.78
UFM1-201ENST00000239878 MYADML2A6NDP7 307 aa3.91□□□□□ -1.78
UFM1-201ENST00000239878 AGPSO00116 658 aa3.91□□□□□ -1.78
UFM1-201ENST00000239878 IKBKBO14920 756 aa3.91□□□□□ -1.78
UFM1-201ENST00000239878 DIAPH2O60879 1101 aa3.91□□□□□ -1.78
UFM1-201ENST00000239878 DUSP11O75319 330 aaKnown RBP3.91□□□□□ -1.78
UFM1-201ENST00000239878 FARP2O94887 1054 aaPredicted RBP3.91□□□□□ -1.78
UFM1-201ENST00000239878 TUBB4AP04350 444 aa3.91□□□□□ -1.78
UFM1-201ENST00000239878 RPN1P04843 607 aaKnown RBP3.91□□□□□ -1.78
UFM1-201ENST00000239878 ZSCAN22P10073 491 aaPredicted RBP3.91□□□□□ -1.78
UFM1-201ENST00000239878 ALDH3A1P30838 453 aa3.91□□□□□ -1.78
UFM1-201ENST00000239878 POLE2P56282 527 aa3.91□□□□□ -1.78
UFM1-201ENST00000239878 PHEXP78562 749 aa3.91□□□□□ -1.78
UFM1-201ENST00000239878 GRM1Q13255 1194 aa3.91□□□□□ -1.78
UFM1-201ENST00000239878 PDCLQ13371 301 aa3.91□□□□□ -1.78
UFM1-201ENST00000239878 ADAM9Q13443 819 aa3.91□□□□□ -1.78
UFM1-201ENST00000239878 RCN1Q15293 331 aa3.91□□□□□ -1.78
UFM1-201ENST00000239878 MTFR1Q15390 333 aa3.91□□□□□ -1.78
UFM1-201ENST00000239878 UBE2SQ16763 222 aa3.91□□□□□ -1.78
UFM1-201ENST00000239878 C4orf48Q5BLP8 95 aa3.91□□□□□ -1.78
UFM1-201ENST00000239878 FOXB2Q5VYV0 432 aa3.91□□□□□ -1.78
UFM1-201ENST00000239878 IQSEC1Q6DN90 963 aa3.91□□□□□ -1.78
UFM1-201ENST00000239878 CXorf57Q6NSI4 855 aaKnown RBP3.91□□□□□ -1.78
UFM1-201ENST00000239878 TMEM53Q6P2H8 277 aa3.91□□□□□ -1.78
UFM1-201ENST00000239878 USP17L6PQ6QN14 398 aa3.91□□□□□ -1.78
UFM1-201ENST00000239878 MAEAQ7L5Y9 396 aa3.91□□□□□ -1.78
UFM1-201ENST00000239878 RASSF3Q86WH2 238 aa3.91□□□□□ -1.78
UFM1-201ENST00000239878 ZNF295-AS1Q8N0V1 137 aa3.91□□□□□ -1.78
UFM1-201ENST00000239878 CBARPQ8N350 705 aaPredicted RBP3.91□□□□□ -1.78
UFM1-201ENST00000239878 CCDC148Q8NFR7 591 aa3.91□□□□□ -1.78
UFM1-201ENST00000239878 PPTC7Q8NI37 304 aa3.91□□□□□ -1.78
UFM1-201ENST00000239878 BAP1Q92560 729 aa3.91□□□□□ -1.78
UFM1-201ENST00000239878 HAS1Q92839 578 aa3.91□□□□□ -1.78
UFM1-201ENST00000239878 GDAP1L1Q96MZ0 367 aa3.91□□□□□ -1.78
UFM1-201ENST00000239878 PCYT2Q99447 389 aa3.91□□□□□ -1.78
UFM1-201ENST00000239878 SLC39A3Q9BRY0 314 aa3.91□□□□□ -1.78
UFM1-201ENST00000239878 SLC26A6Q9BXS9 759 aa3.91□□□□□ -1.78
UFM1-201ENST00000239878 AGO4Q9HCK5 861 aaKnown RBP3.91□□□□□ -1.78
UFM1-201ENST00000239878 GJB4Q9NTQ9 266 aa3.91□□□□□ -1.78
UFM1-201ENST00000239878 ABCF3Q9NUQ8 709 aa3.91□□□□□ -1.78
UFM1-201ENST00000239878 VPS54Q9P1Q0 977 aa3.91□□□□□ -1.78
UFM1-201ENST00000239878 ATXN10Q9UBB4 475 aa3.91□□□□□ -1.78
UFM1-201ENST00000239878 BAIAP2L1Q9UHR4 511 aa3.91□□□□□ -1.78
UFM1-201ENST00000239878 HPCAL4Q9UM19 191 aa3.91□□□□□ -1.78
UFM1-201ENST00000239878 TELO2Q9Y4R8 837 aa3.91□□□□□ -1.78
UFM1-201ENST00000239878 LOXHD1Q8IVV2 1947 aa3.91□□□□□ -1.78
UFM1-201ENST00000239878 EMSYQ7Z589 1322 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms