RNA–Protein interactions for RNA: ENST00000238146.8

DDX55-201, Transcript of DEAD-box helicase 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX55, Length 2,654 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-201ENST00000238146 KCNH7Q9NS40 1196 aa16.42■□□□□ 0.22
DDX55-201ENST00000238146 SENP1Q9P0U3 644 aa16.42■□□□□ 0.22
DDX55-201ENST00000238146 ZBTB21Q9ULJ3 1066 aa16.42■□□□□ 0.22
DDX55-201ENST00000238146 A0A1W2PPM1 405 aa16.42■□□□□ 0.22
DDX55-201ENST00000238146 DNALI1O14645 258 aaPredicted RBP16.42■□□□□ 0.22
DDX55-201ENST00000238146 DHX15O43143 795 aaKnown RBP16.42■□□□□ 0.22
DDX55-201ENST00000238146 ZSCAN5DPP0CG00 497 aa16.42■□□□□ 0.22
DDX55-201ENST00000238146 PTPN4P29074 926 aa16.42■□□□□ 0.22
DDX55-201ENST00000238146 CTCFP49711 727 aaPredicted RBP16.42■□□□□ 0.22
DDX55-201ENST00000238146 SLC45A4Q5BKX6 768 aa16.42■□□□□ 0.22
DDX55-201ENST00000238146 SPDYAQ5MJ70 313 aa16.42■□□□□ 0.22
DDX55-201ENST00000238146 CAPN12Q6ZSI9 719 aa16.42■□□□□ 0.22
DDX55-201ENST00000238146 NLRP9Q7RTR0 991 aa16.42■□□□□ 0.22
DDX55-201ENST00000238146 TRMT1LQ7Z2T5 733 aaKnown RBP16.42■□□□□ 0.22
DDX55-201ENST00000238146 LMNTD2Q8IXW0 634 aa16.42■□□□□ 0.22
DDX55-201ENST00000238146 SH3TC2Q8TF17 1288 aa16.42■□□□□ 0.22
DDX55-201ENST00000238146 FAM84AQ96KN4 292 aa16.42■□□□□ 0.22
DDX55-201ENST00000238146 TTC25Q96NG3 672 aa16.42■□□□□ 0.22
DDX55-201ENST00000238146 ADAM33Q9BZ11 813 aa16.42■□□□□ 0.22
DDX55-201ENST00000238146 DBNDD1Q9H9R9 158 aa16.42■□□□□ 0.22
DDX55-201ENST00000238146 MRPL11Q9Y3B7 192 aaKnown RBP16.42■□□□□ 0.22
DDX55-201ENST00000238146 NUMBLQ9Y6R0 609 aa16.42■□□□□ 0.22
DDX55-201ENST00000238146 LOXHD1Q8IVV2 1947 aa16.42■□□□□ 0.22
DDX55-201ENST00000238146 PDHA1P08559 390 aa16.42■□□□□ 0.22
DDX55-201ENST00000238146 PECAM1P16284 738 aaPredicted RBP16.42■□□□□ 0.22
DDX55-201ENST00000238146 GJC1P36383 396 aa16.42■□□□□ 0.22
DDX55-201ENST00000238146 GCNT1Q02742 428 aa16.42■□□□□ 0.22
DDX55-201ENST00000238146 CCDC142Q17RM4 750 aa16.42■□□□□ 0.22
DDX55-201ENST00000238146 PLEKHG4Q58EX7 1191 aa16.42■□□□□ 0.22
DDX55-201ENST00000238146 MON1BQ7L1V2 547 aa16.42■□□□□ 0.22
DDX55-201ENST00000238146 ACER1Q8TDN7 264 aa16.42■□□□□ 0.22
DDX55-201ENST00000238146 ZNF75CPQ92670 426 aaPredicted RBP16.42■□□□□ 0.22
DDX55-201ENST00000238146 MRRFQ96E11 262 aaKnown RBP16.42■□□□□ 0.22
DDX55-201ENST00000238146 TRIM11Q96F44 468 aa16.42■□□□□ 0.22
DDX55-201ENST00000238146 RANBP17Q9H2T7 1088 aaKnown RBP16.42■□□□□ 0.22
DDX55-201ENST00000238146 ZFP69BQ9UJL9 534 aa16.42■□□□□ 0.22
DDX55-201ENST00000238146 TBX20Q9UMR3 447 aa16.42■□□□□ 0.22
DDX55-201ENST00000238146 RPL26L1Q9UNX3 145 aaKnown RBP16.42■□□□□ 0.22
DDX55-201ENST00000238146 C2CD2LO14523 706 aa16.41■□□□□ 0.22
DDX55-201ENST00000238146 NSFP46459 744 aaKnown RBP16.41■□□□□ 0.22
DDX55-201ENST00000238146 QARSP47897 775 aaKnown RBP16.41■□□□□ 0.22
DDX55-201ENST00000238146 MRPS35P82673 323 aaKnown RBP16.41■□□□□ 0.22
DDX55-201ENST00000238146 HHATQ5VTY9 493 aa16.41■□□□□ 0.22
DDX55-201ENST00000238146 SPDYE1Q8NFV5 336 aaPredicted RBP16.41■□□□□ 0.22
DDX55-201ENST00000238146 EXD1Q8NHP7 514 aa16.41■□□□□ 0.22
DDX55-201ENST00000238146 TMC2Q8TDI7 906 aa16.41■□□□□ 0.22
DDX55-201ENST00000238146 MFSD14AQ96MC6 490 aa16.41■□□□□ 0.22
DDX55-201ENST00000238146 KIFC3Q9BVG8 833 aa16.41■□□□□ 0.22
DDX55-201ENST00000238146 MRIQ9BWK5 157 aa16.41■□□□□ 0.22
DDX55-201ENST00000238146 MAK16Q9BXY0 300 aaKnown RBP16.41■□□□□ 0.22
DDX55-201ENST00000238146 VPS37BQ9H9H4 285 aa16.41■□□□□ 0.22
DDX55-201ENST00000238146 DNPEPQ9ULA0 475 aa16.41■□□□□ 0.22
DDX55-201ENST00000238146 NPM3O75607 178 aaKnown RBP16.41■□□□□ 0.22
DDX55-201ENST00000238146 CYP1A1P04798 512 aaPredicted RBP16.41■□□□□ 0.22
DDX55-201ENST00000238146 MARK3P27448 753 aa16.41■□□□□ 0.22
DDX55-201ENST00000238146 YWHABP31946 246 aaKnown RBP16.41■□□□□ 0.22
DDX55-201ENST00000238146 TUBP50607 506 aa16.41■□□□□ 0.22
DDX55-201ENST00000238146 SPP2Q13103 211 aa16.41■□□□□ 0.22
DDX55-201ENST00000238146 VPS72Q15906 364 aa16.41■□□□□ 0.22
DDX55-201ENST00000238146 CTC1Q2NKJ3 1217 aa16.41■□□□□ 0.22
DDX55-201ENST00000238146 LVRNQ6Q4G3 990 aa16.41■□□□□ 0.22
DDX55-201ENST00000238146 MTDHQ86UE4 582 aaKnown RBP16.41■□□□□ 0.22
DDX55-201ENST00000238146 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.41■□□□□ 0.22
DDX55-201ENST00000238146 DNAJC9Q8WXX5 260 aa16.41■□□□□ 0.22
DDX55-201ENST00000238146 MIPEPQ99797 713 aa16.41■□□□□ 0.22
DDX55-201ENST00000238146 DCLRE1BQ9H816 532 aa16.41■□□□□ 0.22
DDX55-201ENST00000238146 LNPEPQ9UIQ6 1025 aa16.41■□□□□ 0.22
DDX55-201ENST00000238146 USTQ9Y2C2 406 aa16.41■□□□□ 0.22
DDX55-201ENST00000238146 PCDHB2Q9Y5E7 798 aa16.41■□□□□ 0.22
DDX55-201ENST00000238146 POLRMTO00411 1230 aaKnown RBP16.4■□□□□ 0.22
DDX55-201ENST00000238146 LIASO43766 372 aa16.4■□□□□ 0.22
DDX55-201ENST00000238146 ETS1P14921 441 aa16.4■□□□□ 0.22
DDX55-201ENST00000238146 ACADSP16219 412 aa16.4■□□□□ 0.22
DDX55-201ENST00000238146 ENOSF1Q7L5Y1 443 aa16.4■□□□□ 0.22
DDX55-201ENST00000238146 CLNKQ7Z7G1 428 aa16.4■□□□□ 0.22
DDX55-201ENST00000238146 TMEM161BQ8NDZ6 487 aa16.4■□□□□ 0.22
DDX55-201ENST00000238146 FBXO41Q8TF61 875 aa16.4■□□□□ 0.22
DDX55-201ENST00000238146 SYT15Q9BQS2 421 aa16.4■□□□□ 0.22
DDX55-201ENST00000238146 NPHS2Q9NP85 383 aa16.4■□□□□ 0.22
DDX55-201ENST00000238146 SAR1AQ9NR31 198 aa16.4■□□□□ 0.22
DDX55-201ENST00000238146 EXOC7Q9UPT5 735 aa16.4■□□□□ 0.22
DDX55-201ENST00000238146 ABLIM1O14639 778 aa16.4■□□□□ 0.22
DDX55-201ENST00000238146 CFHP08603 1231 aa16.4■□□□□ 0.22
DDX55-201ENST00000238146 KRT10P13645 584 aa16.4■□□□□ 0.22
DDX55-201ENST00000238146 DSG3P32926 999 aa16.4■□□□□ 0.22
DDX55-201ENST00000238146 SSR1P43307 286 aaKnown RBP16.4■□□□□ 0.22
DDX55-201ENST00000238146 ARSEP51690 589 aa16.4■□□□□ 0.22
DDX55-201ENST00000238146 CYP24A1Q07973 514 aa16.4■□□□□ 0.22
DDX55-201ENST00000238146 MAPK6Q16659 721 aa16.4■□□□□ 0.22
DDX55-201ENST00000238146 ATP13A4Q4VNC1 1196 aa16.4■□□□□ 0.22
DDX55-201ENST00000238146 KHDC1Q4VXA5 237 aaKnown RBP16.4■□□□□ 0.22
DDX55-201ENST00000238146 THEMIS2Q5TEJ8 643 aa16.4■□□□□ 0.22
DDX55-201ENST00000238146 RFWD3Q6PCD5 774 aa16.4■□□□□ 0.22
DDX55-201ENST00000238146 SAMD1Q6SPF0 538 aaPredicted RBP16.4■□□□□ 0.22
DDX55-201ENST00000238146 ZNF677Q86XU0 584 aa16.4■□□□□ 0.22
DDX55-201ENST00000238146 MAP4K3Q8IVH8 894 aa16.4■□□□□ 0.22
DDX55-201ENST00000238146 POMGNT1Q8WZA1 660 aa16.4■□□□□ 0.22
DDX55-201ENST00000238146 FBXL18Q96ME1 805 aa16.4■□□□□ 0.22
DDX55-201ENST00000238146 C11orf70Q9BRQ4 267 aa16.4■□□□□ 0.22
DDX55-201ENST00000238146 KLHL11Q9NVR0 708 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms