RNA–Protein interactions for RNA: ENST00000234179.6

PRKD3-201, Transcript of protein kinase D3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKD3, Length 5,900 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-201ENST00000234179 K7ESF4 209 aa2.5□□□□□ -2.01
PRKD3-201ENST00000234179 CAPN9O14815 690 aa2.5□□□□□ -2.01
PRKD3-201ENST00000234179 CCL16O15467 120 aa2.5□□□□□ -2.01
PRKD3-201ENST00000234179 ODC1P11926 461 aa2.5□□□□□ -2.01
PRKD3-201ENST00000234179 IFNAR2P48551 515 aa2.5□□□□□ -2.01
PRKD3-201ENST00000234179 PSEN1P49768 467 aa2.5□□□□□ -2.01
PRKD3-201ENST00000234179 ROR1Q01973 937 aa2.5□□□□□ -2.01
PRKD3-201ENST00000234179 PTH1RQ03431 593 aa2.5□□□□□ -2.01
PRKD3-201ENST00000234179 SUZ12Q15022 739 aaKnown RBP2.5□□□□□ -2.01
PRKD3-201ENST00000234179 MAPRE1Q15691 268 aaKnown RBP2.5□□□□□ -2.01
PRKD3-201ENST00000234179 RTP2Q5QGT7 225 aa2.5□□□□□ -2.01
PRKD3-201ENST00000234179 GALNT15Q8N3T1 639 aa2.5□□□□□ -2.01
PRKD3-201ENST00000234179 ZSCAN18Q8TBC5 510 aaPredicted RBP2.5□□□□□ -2.01
PRKD3-201ENST00000234179 SPIRE2Q8WWL2 714 aa2.5□□□□□ -2.01
PRKD3-201ENST00000234179 CORO1BQ9BR76 489 aa2.5□□□□□ -2.01
PRKD3-201ENST00000234179 CCSER1Q9C0I3 900 aa2.5□□□□□ -2.01
PRKD3-201ENST00000234179 SLC6A14Q9UN76 642 aa2.5□□□□□ -2.01
PRKD3-201ENST00000234179 YIPF1Q9Y548 306 aa2.5□□□□□ -2.01
PRKD3-201ENST00000234179 GPR179Q6PRD1 2367 aa2.5□□□□□ -2.01
PRKD3-201ENST00000234179 LRRIQ4A6NIV6 560 aa2.5□□□□□ -2.01
PRKD3-201ENST00000234179 KIAA0391O15091 583 aaKnown RBP2.5□□□□□ -2.01
PRKD3-201ENST00000234179 YKT6O15498 198 aa2.5□□□□□ -2.01
PRKD3-201ENST00000234179 ZNF217O75362 1048 aa2.5□□□□□ -2.01
PRKD3-201ENST00000234179 RECQL4O94761 1208 aa2.5□□□□□ -2.01
PRKD3-201ENST00000234179 CAVIN2O95810 425 aa2.5□□□□□ -2.01
PRKD3-201ENST00000234179 NTRK1P04629 796 aa2.5□□□□□ -2.01
PRKD3-201ENST00000234179 CLTAP09496 248 aa2.5□□□□□ -2.01
PRKD3-201ENST00000234179 CPB1P15086 417 aa2.5□□□□□ -2.01
PRKD3-201ENST00000234179 AVPR1AP37288 418 aa2.5□□□□□ -2.01
PRKD3-201ENST00000234179 UCNP55089 124 aa2.5□□□□□ -2.01
PRKD3-201ENST00000234179 STRN3Q13033 797 aa2.5□□□□□ -2.01
PRKD3-201ENST00000234179 CAPSQ13938 189 aa2.5□□□□□ -2.01
PRKD3-201ENST00000234179 AMHR2Q16671 573 aa2.5□□□□□ -2.01
PRKD3-201ENST00000234179 PLK5Q496M5 336 aa2.5□□□□□ -2.01
PRKD3-201ENST00000234179 FAM78AQ5JUQ0 283 aa2.5□□□□□ -2.01
PRKD3-201ENST00000234179 WDR45BQ5MNZ6 344 aa2.5□□□□□ -2.01
PRKD3-201ENST00000234179 NYAP1Q6ZVC0 841 aa2.5□□□□□ -2.01
PRKD3-201ENST00000234179 CEP57Q86XR8 500 aa2.5□□□□□ -2.01
PRKD3-201ENST00000234179 CCDC83Q8IWF9 413 aa2.5□□□□□ -2.01
PRKD3-201ENST00000234179 WHAMMQ8TF30 809 aa2.5□□□□□ -2.01
PRKD3-201ENST00000234179 LEO1Q8WVC0 666 aaPredicted RBP2.5□□□□□ -2.01
PRKD3-201ENST00000234179 RSAD2Q8WXG1 361 aa2.5□□□□□ -2.01
PRKD3-201ENST00000234179 HVCN1Q96D96 273 aa2.5□□□□□ -2.01
PRKD3-201ENST00000234179 ACAP3Q96P50 834 aa2.5□□□□□ -2.01
PRKD3-201ENST00000234179 PPP1R10Q96QC0 940 aaKnown RBP2.5□□□□□ -2.01
PRKD3-201ENST00000234179 PPP1R16BQ96T49 567 aa2.5□□□□□ -2.01
PRKD3-201ENST00000234179 SLC26A6Q9BXS9 759 aa2.5□□□□□ -2.01
PRKD3-201ENST00000234179 EVA1BQ9NVM1 165 aa2.5□□□□□ -2.01
PRKD3-201ENST00000234179 KIAA1522Q9P206 1035 aaPredicted RBP2.5□□□□□ -2.01
PRKD3-201ENST00000234179 TBC1D14Q9P2M4 693 aa2.5□□□□□ -2.01
PRKD3-201ENST00000234179 FBXL5Q9UKA1 691 aa2.5□□□□□ -2.01
PRKD3-201ENST00000234179 VAV3Q9UKW4 847 aa2.5□□□□□ -2.01
PRKD3-201ENST00000234179 NAP1L2Q9ULW6 460 aaPredicted RBP2.5□□□□□ -2.01
PRKD3-201ENST00000234179 CACNA1GO43497 2377 aa2.5□□□□□ -2.01
PRKD3-201ENST00000234179 PODXLO00592 558 aa2.5□□□□□ -2.01
PRKD3-201ENST00000234179 AP5Z1O43299 807 aa2.5□□□□□ -2.01
PRKD3-201ENST00000234179 OPHN1O60890 802 aa2.5□□□□□ -2.01
PRKD3-201ENST00000234179 GNSP15586 552 aa2.5□□□□□ -2.01
PRKD3-201ENST00000234179 MCM4P33991 863 aa2.5□□□□□ -2.01
PRKD3-201ENST00000234179 BFSP1Q12934 665 aa2.5□□□□□ -2.01
PRKD3-201ENST00000234179 DUOXA1Q1HG43 343 aa2.5□□□□□ -2.01
PRKD3-201ENST00000234179 ATF7IP2Q5U623 682 aa2.5□□□□□ -2.01
PRKD3-201ENST00000234179 SYT12Q8IV01 421 aa2.5□□□□□ -2.01
PRKD3-201ENST00000234179 CACTIN-AS1Q8N1I8 211 aa2.5□□□□□ -2.01
PRKD3-201ENST00000234179 FSIP1Q8NA03 581 aa2.5□□□□□ -2.01
PRKD3-201ENST00000234179 ITFG1Q8TB96 612 aa2.5□□□□□ -2.01
PRKD3-201ENST00000234179 SKA1Q96BD8 255 aa2.5□□□□□ -2.01
PRKD3-201ENST00000234179 IRX2Q9BZI1 471 aaPredicted RBP2.5□□□□□ -2.01
PRKD3-201ENST00000234179 FBRSQ9HAH7 460 aa2.5□□□□□ -2.01
PRKD3-201ENST00000234179 HEBP1Q9NRV9 189 aa2.5□□□□□ -2.01
PRKD3-201ENST00000234179 PCDHA12Q9UN75 941 aa2.5□□□□□ -2.01
PRKD3-201ENST00000234179 R3HCC1Q9Y3T6 440 aaKnown RBP2.5□□□□□ -2.01
PRKD3-201ENST00000234179 CYP46A1Q9Y6A2 500 aa2.5□□□□□ -2.01
PRKD3-201ENST00000234179 PATJQ8NI35 1801 aa2.5□□□□□ -2.01
PRKD3-201ENST00000234179 K7ERI5 159 aa2.5□□□□□ -2.01
PRKD3-201ENST00000234179 M0QZQ0 153 aa2.5□□□□□ -2.01
PRKD3-201ENST00000234179 BMP15O95972 392 aa2.5□□□□□ -2.01
PRKD3-201ENST00000234179 USP17L7P0C7H9 530 aa2.5□□□□□ -2.01
PRKD3-201ENST00000234179 GLRA2P23416 452 aa2.5□□□□□ -2.01
PRKD3-201ENST00000234179 FCARP24071 287 aa2.5□□□□□ -2.01
PRKD3-201ENST00000234179 RARRES1P49788 294 aa2.5□□□□□ -2.01
PRKD3-201ENST00000234179 TSPY1Q01534 308 aa2.5□□□□□ -2.01
PRKD3-201ENST00000234179 GFPT1Q06210 699 aaPredicted RBP2.5□□□□□ -2.01
PRKD3-201ENST00000234179 C19orf57Q0VDD7 668 aa2.5□□□□□ -2.01
PRKD3-201ENST00000234179 POSTNQ15063 836 aa2.5□□□□□ -2.01
PRKD3-201ENST00000234179 TMEM196Q5HYL7 178 aa2.5□□□□□ -2.01
PRKD3-201ENST00000234179 PMS2CLQ68D20 193 aa2.5□□□□□ -2.01
PRKD3-201ENST00000234179 NCAPH2Q6IBW4 605 aa2.5□□□□□ -2.01
PRKD3-201ENST00000234179 TANGO2Q6ICL3 276 aa2.5□□□□□ -2.01
PRKD3-201ENST00000234179 TYW1BQ6NUM6 668 aa2.5□□□□□ -2.01
PRKD3-201ENST00000234179 MON1AQ86VX9 555 aa2.5□□□□□ -2.01
PRKD3-201ENST00000234179 ZNF557Q8N988 423 aaPredicted RBP2.5□□□□□ -2.01
PRKD3-201ENST00000234179 CD101Q93033 1021 aa2.5□□□□□ -2.01
PRKD3-201ENST00000234179 FUBP3Q96I24 572 aaKnown RBP eCLIP2.5□□□□□ -2.01
PRKD3-201ENST00000234179 HSD17B14Q9BPX1 270 aa2.5□□□□□ -2.01
PRKD3-201ENST00000234179 PRR14Q9BWN1 585 aa2.5□□□□□ -2.01
PRKD3-201ENST00000234179 PDZD7Q9H5P4 517 aa2.5□□□□□ -2.01
PRKD3-201ENST00000234179 COMMD8Q9NX08 183 aa2.5□□□□□ -2.01
PRKD3-201ENST00000234179 CNTN3Q9P232 1028 aa2.5□□□□□ -2.01
PRKD3-201ENST00000234179 ZMIZ1Q9ULJ6 1067 aa2.5□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms