RNA–Protein interactions for RNA: ENST00000233575.6

SNX17-201, Transcript of sorting nexin 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX17, Length 2,044 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-201ENST00000233575 GJA8P48165 433 aa19.92■□□□□ 0.78
SNX17-201ENST00000233575 CDH8P55286 799 aa19.92■□□□□ 0.78
SNX17-201ENST00000233575 PKN2Q16513 984 aaKnown RBP19.92■□□□□ 0.78
SNX17-201ENST00000233575 CCDC122Q5T0U0 273 aa19.92■□□□□ 0.78
SNX17-201ENST00000233575 ALKBH5Q6P6C2 394 aaKnown RBP19.92■□□□□ 0.78
SNX17-201ENST00000233575 BEST2Q8NFU1 509 aa19.92■□□□□ 0.78
SNX17-201ENST00000233575 LINC01599Q8WXQ3 324 aa19.92■□□□□ 0.78
SNX17-201ENST00000233575 DDX1Q92499 740 aaKnown RBP19.92■□□□□ 0.78
SNX17-201ENST00000233575 TAF4BQ92750 862 aa19.92■□□□□ 0.78
SNX17-201ENST00000233575 TRAIPQ9BWF2 469 aa19.92■□□□□ 0.78
SNX17-201ENST00000233575 SMYD3Q9H7B4 428 aa19.92■□□□□ 0.78
SNX17-201ENST00000233575 CISHQ9NSE2 258 aa19.92■□□□□ 0.78
SNX17-201ENST00000233575 MIOSQ9NXC5 875 aa19.92■□□□□ 0.78
SNX17-201ENST00000233575 TAS2R14Q9NYV8 317 aa19.92■□□□□ 0.78
SNX17-201ENST00000233575 GUCA1BQ9UMX6 200 aa19.92■□□□□ 0.78
SNX17-201ENST00000233575 TMCO5BA8MYB1 307 aa19.91■□□□□ 0.78
SNX17-201ENST00000233575 TNFAIP3P21580 790 aa19.91■□□□□ 0.78
SNX17-201ENST00000233575 ATICP31939 592 aa19.91■□□□□ 0.78
SNX17-201ENST00000233575 FAAP100Q0VG06 881 aa19.91■□□□□ 0.78
SNX17-201ENST00000233575 BFSP2Q13515 415 aa19.91■□□□□ 0.78
SNX17-201ENST00000233575 SYT10Q6XYQ8 523 aa19.91■□□□□ 0.78
SNX17-201ENST00000233575 ANKRD33Q7Z3H0 272 aa19.91■□□□□ 0.78
SNX17-201ENST00000233575 MRPL10Q7Z7H8 261 aaKnown RBP19.91■□□□□ 0.78
SNX17-201ENST00000233575 VPS36Q86VN1 386 aa19.91■□□□□ 0.78
SNX17-201ENST00000233575 RBBP8NLQ8NC74 664 aaPredicted RBP19.91■□□□□ 0.78
SNX17-201ENST00000233575 ZNF592Q92610 1267 aa19.91■□□□□ 0.78
SNX17-201ENST00000233575 PCDHB18PQ96TA0 734 aa19.91■□□□□ 0.78
SNX17-201ENST00000233575 VRTNQ9H8Y1 702 aa19.91■□□□□ 0.78
SNX17-201ENST00000233575 CACNG4Q9UBN1 327 aa19.91■□□□□ 0.78
SNX17-201ENST00000233575 CNTN6Q9UQ52 1028 aa19.91■□□□□ 0.78
SNX17-201ENST00000233575 SCN5AQ14524 2016 aa19.9■□□□□ 0.78
SNX17-201ENST00000233575 ZNF623O75123 536 aa19.9■□□□□ 0.78
SNX17-201ENST00000233575 PDE6CP51160 858 aa19.9■□□□□ 0.78
SNX17-201ENST00000233575 TLE2Q04725 743 aa19.9■□□□□ 0.78
SNX17-201ENST00000233575 ZNF394Q53GI3 561 aa19.9■□□□□ 0.78
SNX17-201ENST00000233575 C9orf57Q5W0N0 161 aa19.9■□□□□ 0.78
SNX17-201ENST00000233575 PPP1R10Q96QC0 940 aaKnown RBP19.9■□□□□ 0.78
SNX17-201ENST00000233575 WDR24Q96S15 920 aa19.9■□□□□ 0.78
SNX17-201ENST00000233575 BCO2Q9BYV7 579 aa19.9■□□□□ 0.78
SNX17-201ENST00000233575 R3HCC1Q9Y3T6 440 aaKnown RBP19.9■□□□□ 0.78
SNX17-201ENST00000233575 TET1Q8NFU7 2136 aa19.9■□□□□ 0.78
SNX17-201ENST00000233575 ARL5CA6NH57 179 aa19.9■□□□□ 0.78
SNX17-201ENST00000233575 ANXA13P27216 316 aa19.9■□□□□ 0.78
SNX17-201ENST00000233575 ETF1P62495 437 aaKnown RBP19.9■□□□□ 0.78
SNX17-201ENST00000233575 FMO1Q01740 532 aa19.9■□□□□ 0.78
SNX17-201ENST00000233575 NAB2Q15742 525 aa19.9■□□□□ 0.78
SNX17-201ENST00000233575 SCLYQ96I15 445 aa19.9■□□□□ 0.78
SNX17-201ENST00000233575 SALL4Q9UJQ4 1053 aa19.9■□□□□ 0.78
SNX17-201ENST00000233575 PAXBP1Q9Y5B6 917 aa19.9■□□□□ 0.78
SNX17-201ENST00000233575 ANO9A1A5B4 782 aa19.89■□□□□ 0.77
SNX17-201ENST00000233575 PITPNM1O00562 1244 aa19.89■□□□□ 0.77
SNX17-201ENST00000233575 IGFBP6P24592 240 aaPredicted RBP19.89■□□□□ 0.77
SNX17-201ENST00000233575 ZNF132P52740 706 aa19.89■□□□□ 0.77
SNX17-201ENST00000233575 GNG11P61952 73 aa19.89■□□□□ 0.77
SNX17-201ENST00000233575 ZNF662Q6ZS27 426 aa19.89■□□□□ 0.77
SNX17-201ENST00000233575 MACROD2A1Z1Q3 448 aa19.88■□□□□ 0.77
SNX17-201ENST00000233575 PIRO00625 290 aa19.88■□□□□ 0.77
SNX17-201ENST00000233575 CFHP08603 1231 aa19.88■□□□□ 0.77
SNX17-201ENST00000233575 SSTR3P32745 418 aaPredicted RBP19.88■□□□□ 0.77
SNX17-201ENST00000233575 RAB27AP51159 221 aa19.88■□□□□ 0.77
SNX17-201ENST00000233575 SCNN1GP51170 649 aa19.88■□□□□ 0.77
SNX17-201ENST00000233575 CDR2Q01850 454 aa19.88■□□□□ 0.77
SNX17-201ENST00000233575 KIF5AQ12840 1032 aa19.88■□□□□ 0.77
SNX17-201ENST00000233575 TCTN1Q2MV58 587 aa19.88■□□□□ 0.77
SNX17-201ENST00000233575 ECHDC2Q86YB7 292 aa19.88■□□□□ 0.77
SNX17-201ENST00000233575 HACE1Q8IYU2 909 aa19.88■□□□□ 0.77
SNX17-201ENST00000233575 PAWRQ96IZ0 340 aaKnown RBP19.88■□□□□ 0.77
SNX17-201ENST00000233575 PPP1R12CQ9BZL4 782 aa19.88■□□□□ 0.77
SNX17-201ENST00000233575 RGS18Q9NS28 235 aa19.88■□□□□ 0.77
SNX17-201ENST00000233575 HMGXB4Q9UGU5 601 aa19.88■□□□□ 0.77
SNX17-201ENST00000233575 DNAI1Q9UI46 699 aa19.88■□□□□ 0.77
SNX17-201ENST00000233575 GIT1Q9Y2X7 761 aa19.88■□□□□ 0.77
SNX17-201ENST00000233575 TLR3O15455 904 aaKnown RBP19.88■□□□□ 0.77
SNX17-201ENST00000233575 PJA2O43164 708 aa19.88■□□□□ 0.77
SNX17-201ENST00000233575 STAU1O95793 577 aaKnown RBP19.88■□□□□ 0.77
SNX17-201ENST00000233575 CCL23P55773 120 aa19.88■□□□□ 0.77
SNX17-201ENST00000233575 ORC1Q13415 861 aa19.88■□□□□ 0.77
SNX17-201ENST00000233575 ZNF598Q86UK7 904 aaKnown RBP19.88■□□□□ 0.77
SNX17-201ENST00000233575 DBF4BQ8NFT6 615 aa19.88■□□□□ 0.77
SNX17-201ENST00000233575 WNT8AQ9H1J5 351 aa19.88■□□□□ 0.77
SNX17-201ENST00000233575 HIPK3Q9H422 1215 aa19.88■□□□□ 0.77
SNX17-201ENST00000233575 ATP11BQ9Y2G3 1177 aa19.88■□□□□ 0.77
SNX17-201ENST00000233575 TANC1Q9C0D5 1861 aa19.87■□□□□ 0.77
SNX17-201ENST00000233575 C9IYK1 514 aa19.87■□□□□ 0.77
SNX17-201ENST00000233575 SPTLC1O15269 473 aa19.87■□□□□ 0.77
SNX17-201ENST00000233575 KRT86O43790 486 aa19.87■□□□□ 0.77
SNX17-201ENST00000233575 TWNKQ96RR1 684 aa19.87■□□□□ 0.77
SNX17-201ENST00000233575 RPS6KC1Q96S38 1066 aa19.87■□□□□ 0.77
SNX17-201ENST00000233575 MMS19Q96T76 1030 aa19.87■□□□□ 0.77
SNX17-201ENST00000233575 RSAD1Q9HA92 442 aa19.87■□□□□ 0.77
SNX17-201ENST00000233575 PCDH10Q9P2E7 1040 aa19.87■□□□□ 0.77
SNX17-201ENST00000233575 SNX9Q9Y5X1 595 aa19.87■□□□□ 0.77
SNX17-201ENST00000233575 DCDC2CA8MYV0 355 aa19.86■□□□□ 0.77
SNX17-201ENST00000233575 GNA15P30679 374 aa19.86■□□□□ 0.77
SNX17-201ENST00000233575 TNNC1P63316 161 aa19.86■□□□□ 0.77
SNX17-201ENST00000233575 MYO1EQ12965 1108 aa19.86■□□□□ 0.77
SNX17-201ENST00000233575 ZNF569Q5MCW4 686 aa19.86■□□□□ 0.77
SNX17-201ENST00000233575 LRRC52Q8N7C0 313 aa19.86■□□□□ 0.77
SNX17-201ENST00000233575 WHAMMQ8TF30 809 aa19.86■□□□□ 0.77
SNX17-201ENST00000233575 RABGGTAQ92696 567 aa19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms