RNA–Protein interactions for RNA: ENST00000233072.9

CPS1-201, Transcript of carbamoyl-phosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPS1, Length 5,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-201ENST00000233072 FAM151AQ8WW52 585 aa7.57□□□□□ -1.2
CPS1-201ENST00000233072 MRPL1Q9BYD6 325 aaKnown RBP7.57□□□□□ -1.2
CPS1-201ENST00000233072 PALMDQ9NP74 551 aa7.57□□□□□ -1.2
CPS1-201ENST00000233072 SARS2Q9NP81 518 aaKnown RBP7.57□□□□□ -1.2
CPS1-201ENST00000233072 MORC2Q9Y6X9 1032 aaPredicted RBP7.57□□□□□ -1.2
CPS1-201ENST00000233072 RSPH10B2B2RC85 870 aa7.56□□□□□ -1.2
CPS1-201ENST00000233072 CFAP99D6REC4 459 aa7.56□□□□□ -1.2
CPS1-201ENST00000233072 CYP26A1O43174 497 aa7.56□□□□□ -1.2
CPS1-201ENST00000233072 APOA1P02647 267 aa7.56□□□□□ -1.2
CPS1-201ENST00000233072 ATP1A1P05023 1023 aaKnown RBP7.56□□□□□ -1.2
CPS1-201ENST00000233072 RSPH10BP0C881 870 aa7.56□□□□□ -1.2
CPS1-201ENST00000233072 ZNF200P98182 395 aaPredicted RBP7.56□□□□□ -1.2
CPS1-201ENST00000233072 NCOA4Q13772 614 aa7.56□□□□□ -1.2
CPS1-201ENST00000233072 SNRNP35Q16560 246 aaKnown RBP7.56□□□□□ -1.2
CPS1-201ENST00000233072 KHDRBS2Q5VWX1 349 aaKnown RBP7.56□□□□□ -1.2
CPS1-201ENST00000233072 GLYCTKQ8IVS8 523 aa7.56□□□□□ -1.2
CPS1-201ENST00000233072 SRBD1Q8N5C6 995 aaKnown RBP7.56□□□□□ -1.2
CPS1-201ENST00000233072 RAET1EQ8TD07 263 aa7.56□□□□□ -1.2
CPS1-201ENST00000233072 HPS3Q969F9 1004 aa7.56□□□□□ -1.2
CPS1-201ENST00000233072 RBBP8Q99708 897 aa7.56□□□□□ -1.2
CPS1-201ENST00000233072 HINFPQ9BQA5 517 aa7.56□□□□□ -1.2
CPS1-201ENST00000233072 AAASQ9NRG9 546 aa7.56□□□□□ -1.2
CPS1-201ENST00000233072 TRAF3IP3Q9Y228 551 aa7.56□□□□□ -1.2
CPS1-201ENST00000233072 KIF20BQ96Q89 1820 aa7.56□□□□□ -1.2
CPS1-201ENST00000233072 HOXA2O43364 376 aa7.56□□□□□ -1.2
CPS1-201ENST00000233072 ZC3H11AO75152 810 aaKnown RBP eCLIP7.56□□□□□ -1.2
CPS1-201ENST00000233072 DEAF1O75398 565 aaPredicted RBP7.56□□□□□ -1.2
CPS1-201ENST00000233072 ARIH2O95376 493 aa7.56□□□□□ -1.2
CPS1-201ENST00000233072 ODC1P11926 461 aa7.56□□□□□ -1.2
CPS1-201ENST00000233072 GARTP22102 1010 aa7.56□□□□□ -1.2
CPS1-201ENST00000233072 LAMC2Q13753 1193 aa7.56□□□□□ -1.2
CPS1-201ENST00000233072 AARS2Q5JTZ9 985 aaKnown RBP7.56□□□□□ -1.2
CPS1-201ENST00000233072 ICE2Q659A1 982 aa7.56□□□□□ -1.2
CPS1-201ENST00000233072 NAPEPLDQ6IQ20 393 aa7.56□□□□□ -1.2
CPS1-201ENST00000233072 ATP6V0D2Q8N8Y2 350 aa7.56□□□□□ -1.2
CPS1-201ENST00000233072 CLMNQ96JQ2 1002 aa7.56□□□□□ -1.2
CPS1-201ENST00000233072 GJD4Q96KN9 370 aaPredicted RBP7.56□□□□□ -1.2
CPS1-201ENST00000233072 NT5C1AQ9BXI3 368 aa7.56□□□□□ -1.2
CPS1-201ENST00000233072 ZNF556Q9HAH1 456 aa7.56□□□□□ -1.2
CPS1-201ENST00000233072 HDAC6Q9UBN7 1215 aa7.56□□□□□ -1.2
CPS1-201ENST00000233072 ZNF70Q9UC06 446 aaPredicted RBP7.56□□□□□ -1.2
CPS1-201ENST00000233072 CLASP2O75122 1294 aaKnown RBP7.56□□□□□ -1.2
CPS1-201ENST00000233072 CDH16O75309 829 aa7.56□□□□□ -1.2
CPS1-201ENST00000233072 TADA2AO75478 443 aa7.56□□□□□ -1.2
CPS1-201ENST00000233072 POLBP06746 335 aa7.56□□□□□ -1.2
CPS1-201ENST00000233072 CSF1RP07333 972 aa7.56□□□□□ -1.2
CPS1-201ENST00000233072 MAPK1P28482 360 aa7.56□□□□□ -1.2
CPS1-201ENST00000233072 MDH1P40925 334 aaKnown RBP7.56□□□□□ -1.2
CPS1-201ENST00000233072 KHDRBS1Q07666 443 aaKnown RBP eCLIP7.56□□□□□ -1.2
CPS1-201ENST00000233072 ARHGEF7Q14155 803 aa7.56□□□□□ -1.2
CPS1-201ENST00000233072 FAM47EQ6ZV65 393 aa7.56□□□□□ -1.2
CPS1-201ENST00000233072 NLRP9Q7RTR0 991 aa7.56□□□□□ -1.2
CPS1-201ENST00000233072 TERB1Q8NA31 727 aa7.56□□□□□ -1.2
CPS1-201ENST00000233072 DDX47Q9H0S4 455 aaKnown RBP7.56□□□□□ -1.2
CPS1-201ENST00000233072 KIAA1257Q9ULG3 409 aa7.56□□□□□ -1.2
CPS1-201ENST00000233072 PPP2R3BQ9Y5P8 575 aa7.56□□□□□ -1.2
CPS1-201ENST00000233072 GTPBP10A4D1E9 387 aaKnown RBP7.56□□□□□ -1.2
CPS1-201ENST00000233072 H0Y626 953 aa7.56□□□□□ -1.2
CPS1-201ENST00000233072 ANXA9O76027 345 aa7.56□□□□□ -1.2
CPS1-201ENST00000233072 TRIM16O95361 564 aa7.56□□□□□ -1.2
CPS1-201ENST00000233072 PLA2G4AP47712 749 aa7.56□□□□□ -1.2
CPS1-201ENST00000233072 ZNF211Q13398 564 aaPredicted RBP7.56□□□□□ -1.2
CPS1-201ENST00000233072 ITGA9Q13797 1035 aa7.56□□□□□ -1.2
CPS1-201ENST00000233072 DGKDQ16760 1214 aa7.56□□□□□ -1.2
CPS1-201ENST00000233072 ATF7IP2Q5U623 682 aa7.56□□□□□ -1.2
CPS1-201ENST00000233072 TIGD7Q6NT04 549 aaPredicted RBP7.56□□□□□ -1.2
CPS1-201ENST00000233072 ZNF746Q6NUN9 644 aaPredicted RBP7.56□□□□□ -1.2
CPS1-201ENST00000233072 NOTUMQ6P988 496 aa7.56□□□□□ -1.2
CPS1-201ENST00000233072 METTL16Q86W50 562 aaKnown RBP7.56□□□□□ -1.2
CPS1-201ENST00000233072 PPIL6Q8IXY8 311 aa7.56□□□□□ -1.2
CPS1-201ENST00000233072 REEP2Q9BRK0 252 aa7.56□□□□□ -1.2
CPS1-201ENST00000233072 TMEM106CQ9BVX2 250 aa7.56□□□□□ -1.2
CPS1-201ENST00000233072 NIF3L1Q9GZT8 377 aa7.56□□□□□ -1.2
CPS1-201ENST00000233072 VCPKMTQ9H867 229 aa7.56□□□□□ -1.2
CPS1-201ENST00000233072 NMRK1Q9NWW6 199 aa7.56□□□□□ -1.2
CPS1-201ENST00000233072 ADAM21Q9UKJ8 722 aa7.56□□□□□ -1.2
CPS1-201ENST00000233072 AGAP1Q9UPQ3 857 aa7.56□□□□□ -1.2
CPS1-201ENST00000233072 CDY2AQ9Y6F7 541 aa7.56□□□□□ -1.2
CPS1-201ENST00000233072 CDY1Q9Y6F8 540 aa7.56□□□□□ -1.2
CPS1-201ENST00000233072 AGLP35573 1532 aa7.56□□□□□ -1.2
CPS1-201ENST00000233072 KAT6BQ8WYB5 2073 aa7.56□□□□□ -1.2
CPS1-201ENST00000233072 IQSEC2Q5JU85 1478 aa7.56□□□□□ -1.2
CPS1-201ENST00000233072 NDUFS3O75489 264 aa7.56□□□□□ -1.2
CPS1-201ENST00000233072 MOCS2O96007 188 aaPredicted RBP7.56□□□□□ -1.2
CPS1-201ENST00000233072 FNTAP49354 379 aa7.56□□□□□ -1.2
CPS1-201ENST00000233072 GEMP55040 296 aa7.56□□□□□ -1.2
CPS1-201ENST00000233072 STX3Q13277 289 aa7.56□□□□□ -1.2
CPS1-201ENST00000233072 PTPN21Q16825 1174 aa7.56□□□□□ -1.2
CPS1-201ENST00000233072 CENPPQ6IPU0 288 aa7.56□□□□□ -1.2
CPS1-201ENST00000233072 SDE2Q6IQ49 451 aa7.56□□□□□ -1.2
CPS1-201ENST00000233072 TAGAPQ8N103 731 aa7.56□□□□□ -1.2
CPS1-201ENST00000233072 SPATA4Q8NEY3 305 aa7.56□□□□□ -1.2
CPS1-201ENST00000233072 OR6P1Q8NGX9 317 aa7.56□□□□□ -1.2
CPS1-201ENST00000233072 PTPRN2Q92932 1015 aa7.56□□□□□ -1.2
CPS1-201ENST00000233072 CCDC126Q96EE4 140 aa7.56□□□□□ -1.2
CPS1-201ENST00000233072 SRPK1Q96SB4 655 aaKnown RBP7.56□□□□□ -1.2
CPS1-201ENST00000233072 CDK5RAP1Q96SZ6 601 aaKnown RBP7.56□□□□□ -1.2
CPS1-201ENST00000233072 DSEQ9UL01 958 aa7.56□□□□□ -1.2
CPS1-201ENST00000233072 NCOA3Q9Y6Q9 1424 aa7.56□□□□□ -1.2
CPS1-201ENST00000233072 NRXN1Q9ULB1 1477 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms