RNA–Protein interactions for RNA: ENST00000221922.10

CCDC9-201, Transcript of coiled-coil domain containing 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC9, Length 2,093 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-201ENST00000221922 GAS2O43903 313 aaKnown RBP23.63■■□□□ 1.37
CCDC9-201ENST00000221922 SLC1A1P43005 524 aa23.63■■□□□ 1.37
CCDC9-201ENST00000221922 NSFP46459 744 aaKnown RBP23.63■■□□□ 1.37
CCDC9-201ENST00000221922 CUL2Q13617 745 aa23.63■■□□□ 1.37
CCDC9-201ENST00000221922 ANKRD20A8PQ5CZ79 823 aa23.63■■□□□ 1.37
CCDC9-201ENST00000221922 CCDC105Q8IYK2 499 aa23.63■■□□□ 1.37
CCDC9-201ENST00000221922 SLCO2A1Q92959 643 aa23.63■■□□□ 1.37
CCDC9-201ENST00000221922 LRRC19Q9H756 370 aa23.63■■□□□ 1.37
CCDC9-201ENST00000221922 ANKFY1Q9P2R3 1169 aa23.63■■□□□ 1.37
CCDC9-201ENST00000221922 PASKQ96RG2 1323 aa23.62■■□□□ 1.37
CCDC9-201ENST00000221922 RIPK2O43353 540 aa23.62■■□□□ 1.37
CCDC9-201ENST00000221922 VNN1O95497 513 aa23.62■■□□□ 1.37
CCDC9-201ENST00000221922 POTEJP0CG39 1038 aa23.62■■□□□ 1.37
CCDC9-201ENST00000221922 CENPCQ03188 943 aa23.62■■□□□ 1.37
CCDC9-201ENST00000221922 PLPPR4Q7Z2D5 763 aa23.62■■□□□ 1.37
CCDC9-201ENST00000221922 CPNE8Q86YQ8 564 aa23.62■■□□□ 1.37
CCDC9-201ENST00000221922 ZBTB45Q96K62 511 aaPredicted RBP23.62■■□□□ 1.37
CCDC9-201ENST00000221922 ADGRA2Q96PE1 1338 aa23.62■■□□□ 1.37
CCDC9-201ENST00000221922 GOLGA6L7A0A1B0GV03 622 aa23.61■■□□□ 1.37
CCDC9-201ENST00000221922 DNM1LO00429 736 aa23.61■■□□□ 1.37
CCDC9-201ENST00000221922 CYP1A1P04798 512 aaPredicted RBP23.61■■□□□ 1.37
CCDC9-201ENST00000221922 EFNA5P52803 228 aa23.61■■□□□ 1.37
CCDC9-201ENST00000221922 AP3M2P53677 418 aa23.61■■□□□ 1.37
CCDC9-201ENST00000221922 WNT7BP56706 349 aa23.61■■□□□ 1.37
CCDC9-201ENST00000221922 IFI35P80217 286 aaPredicted RBP23.61■■□□□ 1.37
CCDC9-201ENST00000221922 ZNF568Q3ZCX4 644 aa23.61■■□□□ 1.37
CCDC9-201ENST00000221922 LDLRAD1Q5T700 205 aa23.61■■□□□ 1.37
CCDC9-201ENST00000221922 IER5Q5VY09 327 aa23.61■■□□□ 1.37
CCDC9-201ENST00000221922 ZPBP2Q6X784 338 aa23.61■■□□□ 1.37
CCDC9-201ENST00000221922 EXOC8Q8IYI6 725 aa23.61■■□□□ 1.37
CCDC9-201ENST00000221922 SHCBP1Q8NEM2 672 aa23.61■■□□□ 1.37
CCDC9-201ENST00000221922 CCDC134Q9H6E4 229 aa23.61■■□□□ 1.37
CCDC9-201ENST00000221922 PTPRJQ12913 1337 aa23.61■■□□□ 1.37
CCDC9-201ENST00000221922 TLDC2A0PJX2 215 aa23.61■■□□□ 1.37
CCDC9-201ENST00000221922 ACO1P21399 889 aaKnown RBP23.61■■□□□ 1.37
CCDC9-201ENST00000221922 UBAP2Q5T6F2 1119 aaKnown RBP23.61■■□□□ 1.37
CCDC9-201ENST00000221922 MAIP1Q8WWC4 291 aa23.61■■□□□ 1.37
CCDC9-201ENST00000221922 FAM84AQ96KN4 292 aa23.61■■□□□ 1.37
CCDC9-201ENST00000221922 STMN4Q9H169 189 aaPredicted RBP23.61■■□□□ 1.37
CCDC9-201ENST00000221922 FSCN2O14926 492 aa23.6■■□□□ 1.37
CCDC9-201ENST00000221922 EDN1P05305 212 aa23.6■■□□□ 1.37
CCDC9-201ENST00000221922 SPRED3Q2MJR0 410 aa23.6■■□□□ 1.37
CCDC9-201ENST00000221922 HSDL1Q3SXM5 330 aa23.6■■□□□ 1.37
CCDC9-201ENST00000221922 LIN9Q5TKA1 542 aa23.6■■□□□ 1.37
CCDC9-201ENST00000221922 MFSD5Q6N075 450 aa23.6■■□□□ 1.37
CCDC9-201ENST00000221922 CCDC62Q6P9F0 684 aa23.6■■□□□ 1.37
CCDC9-201ENST00000221922 TCP11Q8WWU5 503 aa23.6■■□□□ 1.37
CCDC9-201ENST00000221922 CCT6BQ92526 530 aa23.6■■□□□ 1.37
CCDC9-201ENST00000221922 KDM4CQ9H3R0 1056 aa23.6■■□□□ 1.37
CCDC9-201ENST00000221922 PCDHB4Q9Y5E5 795 aa23.6■■□□□ 1.37
CCDC9-201ENST00000221922 CNTNAP2Q9UHC6 1331 aa23.6■■□□□ 1.37
CCDC9-201ENST00000221922 SCN4AP35499 1836 aa23.6■■□□□ 1.37
CCDC9-201ENST00000221922 NOP56O00567 594 aaKnown RBP23.6■■□□□ 1.37
CCDC9-201ENST00000221922 ASAP2O43150 1006 aa23.6■■□□□ 1.37
CCDC9-201ENST00000221922 CLTAP09496 248 aa23.6■■□□□ 1.37
CCDC9-201ENST00000221922 SNAPC2Q13487 334 aa23.6■■□□□ 1.37
CCDC9-201ENST00000221922 CDCA2Q69YH5 1023 aaPredicted RBP23.6■■□□□ 1.37
CCDC9-201ENST00000221922 TAX1BP1Q86VP1 789 aa23.6■■□□□ 1.37
CCDC9-201ENST00000221922 PRPF31Q8WWY3 499 aaKnown RBP23.6■■□□□ 1.37
CCDC9-201ENST00000221922 CCDC114Q96M63 670 aa23.6■■□□□ 1.37
CCDC9-201ENST00000221922 SBDSQ9Y3A5 250 aaKnown RBP eCLIP23.6■■□□□ 1.37
CCDC9-201ENST00000221922 IGKV6-21A0A0C4DH24 114 aa23.59■■□□□ 1.37
CCDC9-201ENST00000221922 ECEL1O95672 775 aa23.59■■□□□ 1.37
CCDC9-201ENST00000221922 GHRP10912 638 aa23.59■■□□□ 1.37
CCDC9-201ENST00000221922 FGFR4P22455 802 aa23.59■■□□□ 1.37
CCDC9-201ENST00000221922 GRM1Q13255 1194 aa23.59■■□□□ 1.37
CCDC9-201ENST00000221922 SPOPLQ6IQ16 392 aa23.59■■□□□ 1.37
CCDC9-201ENST00000221922 MON1BQ7L1V2 547 aa23.59■■□□□ 1.37
CCDC9-201ENST00000221922 EPS8L3Q8TE67 593 aaKnown RBP23.59■■□□□ 1.37
CCDC9-201ENST00000221922 GTF3C2Q8WUA4 911 aaPredicted RBP23.59■■□□□ 1.37
CCDC9-201ENST00000221922 CPA5Q8WXQ8 436 aa23.59■■□□□ 1.37
CCDC9-201ENST00000221922 VCPIP1Q96JH7 1222 aa23.59■■□□□ 1.37
CCDC9-201ENST00000221922 SELENOSQ9BQE4 189 aa23.59■■□□□ 1.37
CCDC9-201ENST00000221922 IMPG2Q9BZV3 1241 aa23.59■■□□□ 1.37
CCDC9-201ENST00000221922 ROPN1BQ9BZX4 212 aaPredicted RBP23.59■■□□□ 1.37
CCDC9-201ENST00000221922 CCDC113Q9H0I3 377 aa23.59■■□□□ 1.37
CCDC9-201ENST00000221922 ROPN1Q9HAT0 212 aaPredicted RBP23.59■■□□□ 1.37
CCDC9-201ENST00000221922 APOBEC3GQ9HC16 384 aaKnown RBP23.59■■□□□ 1.37
CCDC9-201ENST00000221922 SLC40A1Q9NP59 571 aa23.59■■□□□ 1.37
CCDC9-201ENST00000221922 KLC4Q9NSK0 619 aa23.59■■□□□ 1.37
CCDC9-201ENST00000221922 CNTN6Q9UQ52 1028 aa23.59■■□□□ 1.37
CCDC9-201ENST00000221922 PTPN22Q9Y2R2 807 aa23.59■■□□□ 1.37
CCDC9-201ENST00000221922 MCM3APO60318 1980 aa23.59■■□□□ 1.37
CCDC9-201ENST00000221922 MROH7Q68CQ1 1323 aa23.59■■□□□ 1.37
CCDC9-201ENST00000221922 CLDN3O15551 220 aa23.58■■□□□ 1.37
CCDC9-201ENST00000221922 RRM1P23921 792 aa23.58■■□□□ 1.37
CCDC9-201ENST00000221922 GJA5P36382 358 aa23.58■■□□□ 1.37
CCDC9-201ENST00000221922 KCNJ1P48048 391 aa23.58■■□□□ 1.37
CCDC9-201ENST00000221922 SLC26A2P50443 739 aa23.58■■□□□ 1.37
CCDC9-201ENST00000221922 MNAT1P51948 309 aa23.58■■□□□ 1.37
CCDC9-201ENST00000221922 NOP14P78316 857 aaKnown RBP23.58■■□□□ 1.37
CCDC9-201ENST00000221922 AUHQ13825 339 aaKnown RBP23.58■■□□□ 1.37
CCDC9-201ENST00000221922 MXD4Q14582 209 aaPredicted RBP23.58■■□□□ 1.37
CCDC9-201ENST00000221922 TRMT10CQ7L0Y3 403 aaKnown RBP23.58■■□□□ 1.37
CCDC9-201ENST00000221922 PIGWQ7Z7B1 504 aa23.58■■□□□ 1.37
CCDC9-201ENST00000221922 BRSK2Q8IWQ3 736 aa23.58■■□□□ 1.37
CCDC9-201ENST00000221922 ABRAQ8N0Z2 381 aa23.58■■□□□ 1.37
CCDC9-201ENST00000221922 MRPL4Q9BYD3 311 aaKnown RBP23.58■■□□□ 1.37
CCDC9-201ENST00000221922 WHRNQ9P202 907 aa23.58■■□□□ 1.37
CCDC9-201ENST00000221922 ZBTB42B2RXF5 422 aa23.58■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms