RNA–Protein interactions for RNA: ENST00000221222.15

HOMER3-201, Transcript of homer scaffold protein 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene HOMER3, Length 1,384 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-201ENST00000221222 SUSD3Q96L08 255 aa25.45■■□□□ 1.67
HOMER3-201ENST00000221222 ZBP1Q9H171 429 aa25.45■■□□□ 1.67
HOMER3-201ENST00000221222 TMEM8AQ9HCN3 771 aa25.45■■□□□ 1.67
HOMER3-201ENST00000221222 CAVIN2O95810 425 aa25.44■■□□□ 1.66
HOMER3-201ENST00000221222 CST3P01034 146 aaPredicted RBP25.44■■□□□ 1.66
HOMER3-201ENST00000221222 BRCC3P46736 316 aa25.44■■□□□ 1.66
HOMER3-201ENST00000221222 GCLMP48507 274 aa25.44■■□□□ 1.66
HOMER3-201ENST00000221222 ZNF165P49910 485 aa25.44■■□□□ 1.66
HOMER3-201ENST00000221222 BIRC3Q13489 604 aa25.44■■□□□ 1.66
HOMER3-201ENST00000221222 NCAPHQ15003 741 aa25.44■■□□□ 1.66
HOMER3-201ENST00000221222 PTPROQ16827 1216 aa25.44■■□□□ 1.66
HOMER3-201ENST00000221222 SV2CQ496J9 727 aa25.44■■□□□ 1.66
HOMER3-201ENST00000221222 TIGD5Q53EQ6 642 aa25.44■■□□□ 1.66
HOMER3-201ENST00000221222 MRPL38Q96DV4 380 aaKnown RBP25.44■■□□□ 1.66
HOMER3-201ENST00000221222 CHST7Q9NS84 486 aa25.44■■□□□ 1.66
HOMER3-201ENST00000221222 SAMSN1Q9NSI8 373 aaKnown RBP25.44■■□□□ 1.66
HOMER3-201ENST00000221222 M0QZQ0 153 aa25.44■■□□□ 1.66
HOMER3-201ENST00000221222 FSCN2O14926 492 aa25.44■■□□□ 1.66
HOMER3-201ENST00000221222 SPTLC1O15269 473 aa25.44■■□□□ 1.66
HOMER3-201ENST00000221222 PHACTR2O75167 634 aa25.44■■□□□ 1.66
HOMER3-201ENST00000221222 CTSAP10619 480 aa25.44■■□□□ 1.66
HOMER3-201ENST00000221222 USP41Q3LFD5 358 aa25.44■■□□□ 1.66
HOMER3-201ENST00000221222 CDKAL1Q5VV42 579 aa25.44■■□□□ 1.66
HOMER3-201ENST00000221222 KRT39Q6A163 491 aa25.44■■□□□ 1.66
HOMER3-201ENST00000221222 PDE12Q6L8Q7 609 aaKnown RBP25.44■■□□□ 1.66
HOMER3-201ENST00000221222 TAS1R1Q7RTX1 841 aa25.44■■□□□ 1.66
HOMER3-201ENST00000221222 R3HCC1Q9Y3T6 440 aaKnown RBP25.44■■□□□ 1.66
HOMER3-201ENST00000221222 NCOR1O75376 2440 aa25.43■■□□□ 1.66
HOMER3-201ENST00000221222 TNFRSF10AO00220 468 aa25.43■■□□□ 1.66
HOMER3-201ENST00000221222 VNN1O95497 513 aa25.43■■□□□ 1.66
HOMER3-201ENST00000221222 STAU1O95793 577 aaKnown RBP25.43■■□□□ 1.66
HOMER3-201ENST00000221222 FGFR3P22607 806 aa25.43■■□□□ 1.66
HOMER3-201ENST00000221222 ATICP31939 592 aa25.43■■□□□ 1.66
HOMER3-201ENST00000221222 MXI1P50539 228 aa25.43■■□□□ 1.66
HOMER3-201ENST00000221222 ERVFC1P60507 584 aa25.43■■□□□ 1.66
HOMER3-201ENST00000221222 TRPC3Q13507 836 aa25.43■■□□□ 1.66
HOMER3-201ENST00000221222 NCOA4Q13772 614 aa25.43■■□□□ 1.66
HOMER3-201ENST00000221222 FAM171A1Q5VUB5 890 aa25.43■■□□□ 1.66
HOMER3-201ENST00000221222 PDZRN4Q6ZMN7 1036 aaPredicted RBP25.43■■□□□ 1.66
HOMER3-201ENST00000221222 GPR65Q8IYL9 337 aa25.43■■□□□ 1.66
HOMER3-201ENST00000221222 AOPEPQ8N6M6 819 aa25.43■■□□□ 1.66
HOMER3-201ENST00000221222 NGRNQ9NPE2 291 aaKnown RBP25.43■■□□□ 1.66
HOMER3-201ENST00000221222 UTP18Q9Y5J1 556 aaKnown RBP eCLIP25.43■■□□□ 1.66
HOMER3-201ENST00000221222 KPNA7A9QM74 516 aa25.42■■□□□ 1.66
HOMER3-201ENST00000221222 I3L4J1 428 aa25.42■■□□□ 1.66
HOMER3-201ENST00000221222 SYN3O14994 580 aa25.42■■□□□ 1.66
HOMER3-201ENST00000221222 EEF1GP26641 437 aaKnown RBP25.42■■□□□ 1.66
HOMER3-201ENST00000221222 MYO1EQ12965 1108 aa25.42■■□□□ 1.66
HOMER3-201ENST00000221222 LRSAM1Q6UWE0 723 aa25.42■■□□□ 1.66
HOMER3-201ENST00000221222 TMC7Q7Z402 723 aa25.42■■□□□ 1.66
HOMER3-201ENST00000221222 DHX40Q8IX18 779 aaKnown RBP25.42■■□□□ 1.66
HOMER3-201ENST00000221222 HPDLQ96IR7 371 aa25.42■■□□□ 1.66
HOMER3-201ENST00000221222 NECAB3Q96P71 396 aaPredicted RBP25.42■■□□□ 1.66
HOMER3-201ENST00000221222 UHRF1Q96T88 793 aaPredicted RBP25.42■■□□□ 1.66
HOMER3-201ENST00000221222 TCF25Q9BQ70 676 aa25.42■■□□□ 1.66
HOMER3-201ENST00000221222 XYLT2Q9H1B5 865 aa25.42■■□□□ 1.66
HOMER3-201ENST00000221222 MMRN2Q9H8L6 949 aa25.42■■□□□ 1.66
HOMER3-201ENST00000221222 FANCLQ9NW38 375 aa25.42■■□□□ 1.66
HOMER3-201ENST00000221222 GDAP2Q9NXN4 497 aa25.42■■□□□ 1.66
HOMER3-201ENST00000221222 MAGEC2Q9UBF1 373 aaPredicted RBP25.42■■□□□ 1.66
HOMER3-201ENST00000221222 PCDHB8Q9UN66 801 aa25.42■■□□□ 1.66
HOMER3-201ENST00000221222 IRAK3Q9Y616 596 aa25.42■■□□□ 1.66
HOMER3-201ENST00000221222 TSC2P49815 1807 aa25.41■■□□□ 1.66
HOMER3-201ENST00000221222 PMM2O15305 246 aa25.41■■□□□ 1.66
HOMER3-201ENST00000221222 IRS1P35568 1242 aa25.41■■□□□ 1.66
HOMER3-201ENST00000221222 GLUD2P49448 558 aa25.41■■□□□ 1.66
HOMER3-201ENST00000221222 KCNQ1P51787 676 aa25.41■■□□□ 1.66
HOMER3-201ENST00000221222 DSG1Q02413 1049 aa25.41■■□□□ 1.66
HOMER3-201ENST00000221222 BMS1Q14692 1282 aaKnown RBP25.41■■□□□ 1.66
HOMER3-201ENST00000221222 CBWD6Q4V339 395 aa25.41■■□□□ 1.66
HOMER3-201ENST00000221222 CBWD3Q5JTY5 395 aa25.41■■□□□ 1.66
HOMER3-201ENST00000221222 CBWD5Q5RIA9 395 aa25.41■■□□□ 1.66
HOMER3-201ENST00000221222 KIAA0319Q5VV43 1072 aa25.41■■□□□ 1.66
HOMER3-201ENST00000221222 DSTYKQ6XUX3 929 aa25.41■■□□□ 1.66
HOMER3-201ENST00000221222 SENP8Q96LD8 212 aa25.41■■□□□ 1.66
HOMER3-201ENST00000221222 TTPALQ9BTX7 342 aa25.41■■□□□ 1.66
HOMER3-201ENST00000221222 VRTNQ9H8Y1 702 aa25.41■■□□□ 1.66
HOMER3-201ENST00000221222 ENTPD7Q9NQZ7 604 aa25.41■■□□□ 1.66
HOMER3-201ENST00000221222 COQ4Q9Y3A0 265 aa25.41■■□□□ 1.66
HOMER3-201ENST00000221222 MYO7AQ13402 2215 aa25.4■■□□□ 1.66
HOMER3-201ENST00000221222 SMTNL1A8MU46 457 aa25.4■■□□□ 1.66
HOMER3-201ENST00000221222 KCNJ18B7U540 433 aa25.4■■□□□ 1.66
HOMER3-201ENST00000221222 LILRB3O75022 631 aa25.4■■□□□ 1.66
HOMER3-201ENST00000221222 HLA-DRAP01903 254 aa25.4■■□□□ 1.66
HOMER3-201ENST00000221222 URODP06132 367 aa25.4■■□□□ 1.66
HOMER3-201ENST00000221222 MTIF2P46199 727 aaKnown RBP25.4■■□□□ 1.66
HOMER3-201ENST00000221222 FMO5P49326 533 aa25.4■■□□□ 1.66
HOMER3-201ENST00000221222 MYL6P60660 151 aa25.4■■□□□ 1.66
HOMER3-201ENST00000221222 KCNH2Q12809 1159 aa25.4■■□□□ 1.66
HOMER3-201ENST00000221222 KCNJ12Q14500 433 aa25.4■■□□□ 1.66
HOMER3-201ENST00000221222 SMC1AQ14683 1233 aaKnown RBP25.4■■□□□ 1.66
HOMER3-201ENST00000221222 IQCB1Q15051 598 aa25.4■■□□□ 1.66
HOMER3-201ENST00000221222 HSP90AA4PQ58FG1 418 aa25.4■■□□□ 1.66
HOMER3-201ENST00000221222 TCP11X2Q5H9J9 407 aa25.4■■□□□ 1.66
HOMER3-201ENST00000221222 RTP2Q5QGT7 225 aa25.4■■□□□ 1.66
HOMER3-201ENST00000221222 TAS1R2Q8TE23 839 aa25.4■■□□□ 1.66
HOMER3-201ENST00000221222 B3GALT6Q96L58 329 aa25.4■■□□□ 1.66
HOMER3-201ENST00000221222 HSD3B7Q9H2F3 369 aa25.4■■□□□ 1.66
HOMER3-201ENST00000221222 SSX2IPQ9Y2D8 614 aa25.4■■□□□ 1.66
HOMER3-201ENST00000221222 ARHGEF37A1IGU5 675 aa25.39■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms