RNA–Protein interactions for RNA: ENST00000219084.10

CHD9-201, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best)

Gene CHD9, Length 8,739 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-201ENST00000219084 SERPINB8P50452 374 aa4.62□□□□□ -1.67
CHD9-201ENST00000219084 CYB5D1Q6P9G0 228 aa4.62□□□□□ -1.67
CHD9-201ENST00000219084 HHIPL2Q6UWX4 724 aa4.62□□□□□ -1.67
CHD9-201ENST00000219084 ANLNQ9NQW6 1124 aa4.62□□□□□ -1.67
CHD9-201ENST00000219084 RBM12Q9NTZ6 932 aaKnown RBP4.62□□□□□ -1.67
CHD9-201ENST00000219084 NMRK1Q9NWW6 199 aa4.62□□□□□ -1.67
CHD9-201ENST00000219084 AMACRQ9UHK6 382 aa4.62□□□□□ -1.67
CHD9-201ENST00000219084 ACTL7BQ9Y614 415 aa4.62□□□□□ -1.67
CHD9-201ENST00000219084 NAV1Q8NEY1 1877 aa4.62□□□□□ -1.67
CHD9-201ENST00000219084 MAGEB16A2A368 324 aa4.62□□□□□ -1.67
CHD9-201ENST00000219084 C3orf70A6NLC5 250 aaPredicted RBP4.62□□□□□ -1.67
CHD9-201ENST00000219084 PJA2O43164 708 aa4.62□□□□□ -1.67
CHD9-201ENST00000219084 TEX33O43247 280 aa4.62□□□□□ -1.67
CHD9-201ENST00000219084 SLC2A3P11169 496 aa4.62□□□□□ -1.67
CHD9-201ENST00000219084 ZNF18P17022 549 aa4.62□□□□□ -1.67
CHD9-201ENST00000219084 NR2C2P49116 596 aa4.62□□□□□ -1.67
CHD9-201ENST00000219084 SCNN1DP51172 638 aa4.62□□□□□ -1.67
CHD9-201ENST00000219084 BIRC2Q13490 618 aa4.62□□□□□ -1.67
CHD9-201ENST00000219084 CTTNQ14247 550 aaKnown RBP4.62□□□□□ -1.67
CHD9-201ENST00000219084 TRIP13Q15645 432 aaPredicted RBP4.62□□□□□ -1.67
CHD9-201ENST00000219084 SNRNP35Q16560 246 aaKnown RBP4.62□□□□□ -1.67
CHD9-201ENST00000219084 FAM47EQ6ZV65 393 aa4.62□□□□□ -1.67
CHD9-201ENST00000219084 EXD1Q8NHP7 514 aa4.62□□□□□ -1.67
CHD9-201ENST00000219084 EME1Q96AY2 570 aa4.62□□□□□ -1.67
CHD9-201ENST00000219084 UBE2OQ9C0C9 1292 aaKnown RBP4.62□□□□□ -1.67
CHD9-201ENST00000219084 KLHL4Q9C0H6 718 aa4.62□□□□□ -1.67
CHD9-201ENST00000219084 GOLPH3Q9H4A6 298 aa4.62□□□□□ -1.67
CHD9-201ENST00000219084 STN1Q9H668 368 aaKnown RBP4.62□□□□□ -1.67
CHD9-201ENST00000219084 ZNF556Q9HAH1 456 aa4.62□□□□□ -1.67
CHD9-201ENST00000219084 HNRNPCP07910 306 aaKnown RBP eCLIP4.62□□□□□ -1.67
CHD9-201ENST00000219084 SCTRP47872 440 aa4.62□□□□□ -1.67
CHD9-201ENST00000219084 PTK7Q13308 1070 aa4.62□□□□□ -1.67
CHD9-201ENST00000219084 PKN2Q16513 984 aaKnown RBP4.62□□□□□ -1.67
CHD9-201ENST00000219084 CCDC153Q494R4 210 aa4.62□□□□□ -1.67
CHD9-201ENST00000219084 TMTC4Q5T4D3 741 aa4.62□□□□□ -1.67
CHD9-201ENST00000219084 CDKAL1Q5VV42 579 aa4.62□□□□□ -1.67
CHD9-201ENST00000219084 ZNF772Q68DY9 489 aaPredicted RBP4.62□□□□□ -1.67
CHD9-201ENST00000219084 POTEGQ6S5H5 508 aa4.62□□□□□ -1.67
CHD9-201ENST00000219084 RBM46Q8TBY0 533 aaKnown RBP4.62□□□□□ -1.67
CHD9-201ENST00000219084 MYCBPAPQ8TBZ2 947 aa4.62□□□□□ -1.67
CHD9-201ENST00000219084 ZNF398Q8TD17 642 aa4.62□□□□□ -1.67
CHD9-201ENST00000219084 SLC26A7Q8TE54 656 aa4.62□□□□□ -1.67
CHD9-201ENST00000219084 PIGBQ92521 554 aa4.62□□□□□ -1.67
CHD9-201ENST00000219084 OPTNQ96CV9 577 aa4.62□□□□□ -1.67
CHD9-201ENST00000219084 THAP11Q96EK4 314 aa4.62□□□□□ -1.67
CHD9-201ENST00000219084 ZSWIM1Q9BR11 485 aa4.62□□□□□ -1.67
CHD9-201ENST00000219084 ZNF341Q9BYN7 854 aa4.62□□□□□ -1.67
CHD9-201ENST00000219084 AGXT2Q9BYV1 514 aa4.62□□□□□ -1.67
CHD9-201ENST00000219084 ACAD9Q9H845 621 aa4.62□□□□□ -1.67
CHD9-201ENST00000219084 NOD2Q9HC29 1040 aa4.62□□□□□ -1.67
CHD9-201ENST00000219084 NXF1Q9UBU9 619 aaKnown RBP4.62□□□□□ -1.67
CHD9-201ENST00000219084 CDV3Q9UKY7 258 aaKnown RBP4.62□□□□□ -1.67
CHD9-201ENST00000219084 SHOC2Q9UQ13 582 aa4.62□□□□□ -1.67
CHD9-201ENST00000219084 KDM3BQ7LBC6 1761 aa4.62□□□□□ -1.67
CHD9-201ENST00000219084 ZNF335Q9H4Z2 1342 aaPredicted RBP4.62□□□□□ -1.67
CHD9-201ENST00000219084 TCP10L2B9ZVM9 353 aa4.62□□□□□ -1.67
CHD9-201ENST00000219084 M0QYV0 167 aa4.62□□□□□ -1.67
CHD9-201ENST00000219084 TSHRP16473 764 aa4.62□□□□□ -1.67
CHD9-201ENST00000219084 TTKP33981 857 aa4.62□□□□□ -1.67
CHD9-201ENST00000219084 CRKP46108 304 aa4.62□□□□□ -1.67
CHD9-201ENST00000219084 RBP5P82980 135 aa4.62□□□□□ -1.67
CHD9-201ENST00000219084 KRT72Q14CN4 511 aa4.62□□□□□ -1.67
CHD9-201ENST00000219084 SNX17Q15036 470 aa4.62□□□□□ -1.67
CHD9-201ENST00000219084 HP1BP3Q5SSJ5 553 aaPredicted RBP4.62□□□□□ -1.67
CHD9-201ENST00000219084 CENPPQ6IPU0 288 aa4.62□□□□□ -1.67
CHD9-201ENST00000219084 PPM1NQ8N819 430 aa4.62□□□□□ -1.67
CHD9-201ENST00000219084 SCFD2Q8WU76 684 aa4.62□□□□□ -1.67
CHD9-201ENST00000219084 TADA1Q96BN2 335 aa4.62□□□□□ -1.67
CHD9-201ENST00000219084 C19orf60Q96EN9 201 aa4.62□□□□□ -1.67
CHD9-201ENST00000219084 FOPNLQ96NB1 174 aa4.62□□□□□ -1.67
CHD9-201ENST00000219084 CATSPERBQ9H7T0 1116 aa4.62□□□□□ -1.67
CHD9-201ENST00000219084 UTP6Q9NYH9 597 aaKnown RBP4.62□□□□□ -1.67
CHD9-201ENST00000219084 VTI1BQ9UEU0 232 aa4.62□□□□□ -1.67
CHD9-201ENST00000219084 LRCH1Q9Y2L9 728 aa4.62□□□□□ -1.67
CHD9-201ENST00000219084 WDR91A4D1P6 747 aa4.62□□□□□ -1.67
CHD9-201ENST00000219084 ASB14A6NK59 587 aa4.62□□□□□ -1.67
CHD9-201ENST00000219084 ADCY3O60266 1144 aa4.62□□□□□ -1.67
CHD9-201ENST00000219084 DAB1O75553 588 aa4.62□□□□□ -1.67
CHD9-201ENST00000219084 EIF2S1P05198 315 aaKnown RBP4.62□□□□□ -1.67
CHD9-201ENST00000219084 CSF1RP07333 972 aa4.62□□□□□ -1.67
CHD9-201ENST00000219084 FGFR4P22455 802 aa4.62□□□□□ -1.67
CHD9-201ENST00000219084 CDH6P55285 790 aa4.62□□□□□ -1.67
CHD9-201ENST00000219084 ZNF543Q08ER8 600 aa4.62□□□□□ -1.67
CHD9-201ENST00000219084 UBE2SQ16763 222 aa4.62□□□□□ -1.67
CHD9-201ENST00000219084 DCAF4L1Q3SXM0 396 aa4.62□□□□□ -1.67
CHD9-201ENST00000219084 MTERF2Q49AM1 385 aa4.62□□□□□ -1.67
CHD9-201ENST00000219084 FAM102AQ5T9C2 384 aaPredicted RBP4.62□□□□□ -1.67
CHD9-201ENST00000219084 ZNF746Q6NUN9 644 aaPredicted RBP4.62□□□□□ -1.67
CHD9-201ENST00000219084 HAUS6Q7Z4H7 955 aa4.62□□□□□ -1.67
CHD9-201ENST00000219084 LCA5Q86VQ0 697 aa4.62□□□□□ -1.67
CHD9-201ENST00000219084 CDK5RAP1Q96SZ6 601 aaKnown RBP4.62□□□□□ -1.67
CHD9-201ENST00000219084 SP110Q9HB58 689 aa4.62□□□□□ -1.67
CHD9-201ENST00000219084 SCN3BQ9NY72 215 aa4.62□□□□□ -1.67
CHD9-201ENST00000219084 NYAP2Q9P242 653 aa4.62□□□□□ -1.67
CHD9-201ENST00000219084 CTNNAL1Q9UBT7 734 aa4.62□□□□□ -1.67
CHD9-201ENST00000219084 ASAP1Q9ULH1 1129 aa4.62□□□□□ -1.67
CHD9-201ENST00000219084 SOX13Q9UN79 622 aa4.62□□□□□ -1.67
CHD9-201ENST00000219084 RAD51CO43502 376 aa4.61□□□□□ -1.67
CHD9-201ENST00000219084 KATNA1O75449 491 aa4.61□□□□□ -1.67
CHD9-201ENST00000219084 SRP72O76094 671 aaKnown RBP4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms