RNA–Protein interactions for RNA: ENST00000218652.11

NDFIP2-201, Transcript of Nedd4 family interacting protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDFIP2, Length 4,625 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDFIP2-201ENST00000218652 KCNB2Q92953 911 aa15.68■□□□□ 0.1
NDFIP2-201ENST00000218652 ZNF560Q96MR9 790 aa15.68■□□□□ 0.1
NDFIP2-201ENST00000218652 CCT7Q99832 543 aa15.68■□□□□ 0.1
NDFIP2-201ENST00000218652 KDM4CQ9H3R0 1056 aa15.68■□□□□ 0.1
NDFIP2-201ENST00000218652 FAM49BQ9NUQ9 324 aa15.68■□□□□ 0.1
NDFIP2-201ENST00000218652 ABT1Q9ULW3 272 aaKnown RBP15.68■□□□□ 0.1
NDFIP2-201ENST00000218652 DUSP10Q9Y6W6 482 aa15.68■□□□□ 0.1
NDFIP2-201ENST00000218652 CDK12Q9NYV4 1490 aaPredicted RBP15.68■□□□□ 0.1
NDFIP2-201ENST00000218652 M0R3G1 203 aa15.68■□□□□ 0.1
NDFIP2-201ENST00000218652 NDUFB10O96000 172 aa15.68■□□□□ 0.1
NDFIP2-201ENST00000218652 CYP19A1P11511 503 aaPredicted RBP15.68■□□□□ 0.1
NDFIP2-201ENST00000218652 PDAP1Q13442 181 aaKnown RBP15.68■□□□□ 0.1
NDFIP2-201ENST00000218652 BAATQ14032 418 aaPredicted RBP15.68■□□□□ 0.1
NDFIP2-201ENST00000218652 PLD3Q8IV08 490 aa15.68■□□□□ 0.1
NDFIP2-201ENST00000218652 PNKPQ96T60 521 aa15.68■□□□□ 0.1
NDFIP2-201ENST00000218652 PRPF18Q99633 342 aaKnown RBP15.68■□□□□ 0.1
NDFIP2-201ENST00000218652 PI4K2AQ9BTU6 479 aa15.68■□□□□ 0.1
NDFIP2-201ENST00000218652 CAMSAP3Q9P1Y5 1249 aaPredicted RBP15.68■□□□□ 0.1
NDFIP2-201ENST00000218652 ITM2BQ9Y287 266 aa15.68■□□□□ 0.1
NDFIP2-201ENST00000218652 A0A087X0T9 212 aa15.68■□□□□ 0.1
NDFIP2-201ENST00000218652 C16orf96A6NNT2 1141 aa15.68■□□□□ 0.1
NDFIP2-201ENST00000218652 SLC16A3O15427 465 aaKnown RBP15.68■□□□□ 0.1
NDFIP2-201ENST00000218652 KLHL2O95198 593 aa15.68■□□□□ 0.1
NDFIP2-201ENST00000218652 FAM228BP0C875 321 aa15.68■□□□□ 0.1
NDFIP2-201ENST00000218652 CLK1P49759 484 aaKnown RBP15.68■□□□□ 0.1
NDFIP2-201ENST00000218652 LRRC34Q8IZ02 419 aa15.68■□□□□ 0.1
NDFIP2-201ENST00000218652 E2F7Q96AV8 911 aa15.68■□□□□ 0.1
NDFIP2-201ENST00000218652 CAAP1Q9H8G2 361 aa15.68■□□□□ 0.1
NDFIP2-201ENST00000218652 ARHGEF38Q9NXL2 777 aa15.68■□□□□ 0.1
NDFIP2-201ENST00000218652 GON4LQ3T8J9 2241 aa15.68■□□□□ 0.1
NDFIP2-201ENST00000218652 GYS1P13807 737 aa15.67■□□□□ 0.1
NDFIP2-201ENST00000218652 SPRP35270 261 aaPredicted RBP15.67■□□□□ 0.1
NDFIP2-201ENST00000218652 CORO7P57737 925 aa15.67■□□□□ 0.1
NDFIP2-201ENST00000218652 XKR3Q5GH77 459 aa15.67■□□□□ 0.1
NDFIP2-201ENST00000218652 GJB7Q6PEY0 223 aa15.67■□□□□ 0.1
NDFIP2-201ENST00000218652 NYAP1Q6ZVC0 841 aa15.67■□□□□ 0.1
NDFIP2-201ENST00000218652 SEPT12Q8IYM1 358 aa15.67■□□□□ 0.1
NDFIP2-201ENST00000218652 EFHBQ8N7U6 833 aa15.67■□□□□ 0.1
NDFIP2-201ENST00000218652 ROPN1BQ9BZX4 212 aaPredicted RBP15.67■□□□□ 0.1
NDFIP2-201ENST00000218652 ROPN1Q9HAT0 212 aaPredicted RBP15.67■□□□□ 0.1
NDFIP2-201ENST00000218652 HPS4Q9NQG7 708 aa15.67■□□□□ 0.1
NDFIP2-201ENST00000218652 TBC1D23Q9NUY8 699 aa15.67■□□□□ 0.1
NDFIP2-201ENST00000218652 TMEM253P0C7T8 217 aa15.67■□□□□ 0.1
NDFIP2-201ENST00000218652 HSD17B3P37058 310 aa15.67■□□□□ 0.1
NDFIP2-201ENST00000218652 ANTXR2P58335 489 aa15.67■□□□□ 0.1
NDFIP2-201ENST00000218652 TRADDQ15628 312 aa15.67■□□□□ 0.1
NDFIP2-201ENST00000218652 PCSK7Q16549 785 aa15.67■□□□□ 0.1
NDFIP2-201ENST00000218652 PRPF39Q86UA1 669 aaKnown RBP15.67■□□□□ 0.1
NDFIP2-201ENST00000218652 ARHGEF1Q92888 912 aaKnown RBP15.67■□□□□ 0.1
NDFIP2-201ENST00000218652 OTUB1Q96FW1 271 aaPredicted RBP15.67■□□□□ 0.1
NDFIP2-201ENST00000218652 IL25Q9H293 177 aa15.67■□□□□ 0.1
NDFIP2-201ENST00000218652 NOD2Q9HC29 1040 aa15.67■□□□□ 0.1
NDFIP2-201ENST00000218652 GPBP1L1Q9HC44 474 aaPredicted RBP15.67■□□□□ 0.1
NDFIP2-201ENST00000218652 CD248Q9HCU0 757 aa15.67■□□□□ 0.1
NDFIP2-201ENST00000218652 BLOC1S6Q9UL45 172 aa15.67■□□□□ 0.1
NDFIP2-201ENST00000218652 MTO1Q9Y2Z2 717 aaKnown RBP15.67■□□□□ 0.1
NDFIP2-201ENST00000218652 TXNP10599 105 aaKnown RBP15.67■□□□□ 0.1
NDFIP2-201ENST00000218652 SERPINB9P50453 376 aa15.67■□□□□ 0.1
NDFIP2-201ENST00000218652 PIGHQ14442 188 aaPredicted RBP15.67■□□□□ 0.1
NDFIP2-201ENST00000218652 KRT72Q14CN4 511 aa15.67■□□□□ 0.1
NDFIP2-201ENST00000218652 SNRNP27Q8WVK2 155 aaKnown RBP15.67■□□□□ 0.1
NDFIP2-201ENST00000218652 PAIP2BQ9ULR5 123 aaKnown RBP15.67■□□□□ 0.1
NDFIP2-201ENST00000218652 PIN4Q9Y237 131 aaKnown RBP15.67■□□□□ 0.1
NDFIP2-201ENST00000218652 TRIM49D1C9J1S8 452 aa15.67■□□□□ 0.1
NDFIP2-201ENST00000218652 HIST1H2AGP0C0S8 130 aaPredicted RBP15.67■□□□□ 0.1
NDFIP2-201ENST00000218652 RALAP11233 206 aa15.67■□□□□ 0.1
NDFIP2-201ENST00000218652 HIST1H2ADP20671 130 aa15.67■□□□□ 0.1
NDFIP2-201ENST00000218652 TARSP26639 723 aaKnown RBP15.67■□□□□ 0.1
NDFIP2-201ENST00000218652 TRIM28Q13263 835 aaKnown RBP15.67■□□□□ 0.1
NDFIP2-201ENST00000218652 MMGT1Q8N4V1 131 aa15.67■□□□□ 0.1
NDFIP2-201ENST00000218652 ZNF555Q8NEP9 628 aa15.67■□□□□ 0.1
NDFIP2-201ENST00000218652 PPHLN1Q8NEY8 458 aaKnown RBP15.67■□□□□ 0.1
NDFIP2-201ENST00000218652 HIST1H2AHQ96KK5 128 aa15.67■□□□□ 0.1
NDFIP2-201ENST00000218652 HIST1H2AJQ99878 128 aa15.67■□□□□ 0.1
NDFIP2-201ENST00000218652 H2AFJQ9BTM1 129 aa15.67■□□□□ 0.1
NDFIP2-201ENST00000218652 DMGDHQ9UI17 866 aaKnown RBP15.67■□□□□ 0.1
NDFIP2-201ENST00000218652 GRID1Q9ULK0 1009 aa15.67■□□□□ 0.1
NDFIP2-201ENST00000218652 FARP1Q9Y4F1 1045 aaPredicted RBP15.67■□□□□ 0.1
NDFIP2-201ENST00000218652 CLASP1Q7Z460 1538 aa15.67■□□□□ 0.1
NDFIP2-201ENST00000218652 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.66■□□□□ 0.1
NDFIP2-201ENST00000218652 NFIBO00712 420 aa15.66■□□□□ 0.1
NDFIP2-201ENST00000218652 NDUFS3O75489 264 aa15.66■□□□□ 0.1
NDFIP2-201ENST00000218652 MAP3K6O95382 1288 aa15.66■□□□□ 0.1
NDFIP2-201ENST00000218652 HLA-DRAP01903 254 aa15.66■□□□□ 0.1
NDFIP2-201ENST00000218652 HMBSP08397 361 aa15.66■□□□□ 0.1
NDFIP2-201ENST00000218652 SULT1E1P49888 294 aa15.66■□□□□ 0.1
NDFIP2-201ENST00000218652 MRPS35P82673 323 aaKnown RBP15.66■□□□□ 0.1
NDFIP2-201ENST00000218652 NBPF20Q3BBV1 942 aa15.66■□□□□ 0.1
NDFIP2-201ENST00000218652 FAXCQ5TGI0 409 aa15.66■□□□□ 0.1
NDFIP2-201ENST00000218652 PLA2G4FQ68DD2 849 aa15.66■□□□□ 0.1
NDFIP2-201ENST00000218652 ZNF669Q96BR6 464 aaPredicted RBP15.66■□□□□ 0.1
NDFIP2-201ENST00000218652 PSD3Q9NYI0 1048 aa15.66■□□□□ 0.1
NDFIP2-201ENST00000218652 PLAGL2Q9UPG8 496 aa15.66■□□□□ 0.1
NDFIP2-201ENST00000218652 CDH2P19022 906 aaPredicted RBP15.66■□□□□ 0.1
NDFIP2-201ENST00000218652 S100A5P33763 92 aa15.66■□□□□ 0.1
NDFIP2-201ENST00000218652 TMED10P49755 219 aaKnown RBP15.66■□□□□ 0.1
NDFIP2-201ENST00000218652 NPEPPSP55786 919 aa15.66■□□□□ 0.1
NDFIP2-201ENST00000218652 SMIM5Q71RC9 77 aa15.66■□□□□ 0.1
NDFIP2-201ENST00000218652 ELMO2Q96JJ3 720 aa15.66■□□□□ 0.1
NDFIP2-201ENST00000218652 FUT8Q9BYC5 575 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms