RNA–Protein interactions for RNA: ENST00000216484.6

SPTLC2-201, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC2, Length 8,170 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-201ENST00000216484 FHOD1Q9Y613 1164 aa15.27■□□□□ 0.03
SPTLC2-201ENST00000216484 SEMA3EO15041 775 aa15.27■□□□□ 0.03
SPTLC2-201ENST00000216484 KRT20P35900 424 aa15.27■□□□□ 0.03
SPTLC2-201ENST00000216484 CENPLQ8N0S6 344 aaPredicted RBP15.27■□□□□ 0.03
SPTLC2-201ENST00000216484 ZBTB38Q8NAP3 1195 aaPredicted RBP15.27■□□□□ 0.03
SPTLC2-201ENST00000216484 POMGNT2Q8NAT1 580 aa15.27■□□□□ 0.03
SPTLC2-201ENST00000216484 IP6K1Q92551 441 aa15.27■□□□□ 0.03
SPTLC2-201ENST00000216484 C6orf62Q9GZU0 229 aaPredicted RBP15.27■□□□□ 0.03
SPTLC2-201ENST00000216484 USP15Q9Y4E8 981 aaPredicted RBP15.27■□□□□ 0.03
SPTLC2-201ENST00000216484 PCDHGA3Q9Y5H0 932 aa15.27■□□□□ 0.03
SPTLC2-201ENST00000216484 C3orf70A6NLC5 250 aaPredicted RBP15.26■□□□□ 0.03
SPTLC2-201ENST00000216484 CHN1P15882 459 aa15.26■□□□□ 0.03
SPTLC2-201ENST00000216484 RASGRF1Q13972 1273 aa15.26■□□□□ 0.03
SPTLC2-201ENST00000216484 KPNB1Q14974 876 aaKnown RBP15.26■□□□□ 0.03
SPTLC2-201ENST00000216484 P3H1Q32P28 736 aa15.26■□□□□ 0.03
SPTLC2-201ENST00000216484 EPHX4Q8IUS5 362 aa15.26■□□□□ 0.03
SPTLC2-201ENST00000216484 IARS2Q9NSE4 1012 aaKnown RBP15.26■□□□□ 0.03
SPTLC2-201ENST00000216484 FAM217BQ9NTX9 383 aaPredicted RBP15.26■□□□□ 0.03
SPTLC2-201ENST00000216484 SH3GLB1Q9Y371 365 aa15.26■□□□□ 0.03
SPTLC2-201ENST00000216484 NCK2O43639 380 aa15.26■□□□□ 0.03
SPTLC2-201ENST00000216484 SMNDC1O75940 238 aaKnown RBP eCLIP15.26■□□□□ 0.036e-9■■■■■ 31.1
SPTLC2-201ENST00000216484 ALOX15P16050 662 aaPredicted RBP15.26■□□□□ 0.03
SPTLC2-201ENST00000216484 MAGEA10P43363 369 aaPredicted RBP15.26■□□□□ 0.03
SPTLC2-201ENST00000216484 TAP1Q03518 808 aa15.26■□□□□ 0.03
SPTLC2-201ENST00000216484 KCNH2Q12809 1159 aa15.26■□□□□ 0.03
SPTLC2-201ENST00000216484 ZCWPW2Q504Y3 356 aa15.26■□□□□ 0.03
SPTLC2-201ENST00000216484 XPO6Q96QU8 1125 aaKnown RBP15.26■□□□□ 0.03
SPTLC2-201ENST00000216484 COPRSQ9NQ92 184 aa15.26■□□□□ 0.03
SPTLC2-201ENST00000216484 KLHL1Q9NR64 748 aa15.26■□□□□ 0.03
SPTLC2-201ENST00000216484 NUDT2P50583 147 aa15.26■□□□□ 0.03
SPTLC2-201ENST00000216484 SNX30Q5VWJ9 437 aa15.26■□□□□ 0.03
SPTLC2-201ENST00000216484 RANBP17Q9H2T7 1088 aaKnown RBP15.26■□□□□ 0.03
SPTLC2-201ENST00000216484 SNAPC4Q5SXM2 1469 aa15.26■□□□□ 0.03
SPTLC2-201ENST00000216484 CDK17Q00537 523 aa15.26■□□□□ 0.03
SPTLC2-201ENST00000216484 CHRNDQ07001 517 aa15.26■□□□□ 0.03
SPTLC2-201ENST00000216484 IKBIPQ70UQ0 350 aa15.26■□□□□ 0.03
SPTLC2-201ENST00000216484 CACTIN-AS1Q8N1I8 211 aa15.26■□□□□ 0.03
SPTLC2-201ENST00000216484 MS4A14Q96JA4 679 aa15.26■□□□□ 0.03
SPTLC2-201ENST00000216484 KIAA1586Q9HCI6 787 aa15.26■□□□□ 0.03
SPTLC2-201ENST00000216484 SYNJ1O43426 1573 aa15.26■□□□□ 0.03
SPTLC2-201ENST00000216484 CCND1P24385 295 aa15.26■□□□□ 0.03
SPTLC2-201ENST00000216484 HOXA7P31268 230 aaPredicted RBP15.26■□□□□ 0.03
SPTLC2-201ENST00000216484 CCNIQ14094 377 aa15.26■□□□□ 0.03
SPTLC2-201ENST00000216484 COQ6Q9Y2Z9 468 aa15.26■□□□□ 0.03
SPTLC2-201ENST00000216484 KIF24Q5T7B8 1368 aa15.26■□□□□ 0.03
SPTLC2-201ENST00000216484 MYO3BQ8WXR4 1341 aa15.26■□□□□ 0.03
SPTLC2-201ENST00000216484 TNPO2O14787 897 aaKnown RBP15.26■□□□□ 0.03
SPTLC2-201ENST00000216484 NR3C1P04150 777 aa15.26■□□□□ 0.03
SPTLC2-201ENST00000216484 CCDC130P13994 396 aa15.26■□□□□ 0.03
SPTLC2-201ENST00000216484 RGS2P41220 211 aa15.26■□□□□ 0.03
SPTLC2-201ENST00000216484 SULT1E1P49888 294 aa15.26■□□□□ 0.03
SPTLC2-201ENST00000216484 PKN2Q16513 984 aaKnown RBP15.26■□□□□ 0.03
SPTLC2-201ENST00000216484 ULK3Q6PHR2 472 aa15.26■□□□□ 0.03
SPTLC2-201ENST00000216484 TRPM8Q7Z2W7 1104 aa15.26■□□□□ 0.03
SPTLC2-201ENST00000216484 AGGF1Q8N302 714 aaeCLIP15.26■□□□□ 0.036e-8■■■■■ 30.1
SPTLC2-201ENST00000216484 KIF2BQ8N4N8 673 aa15.26■□□□□ 0.03
SPTLC2-201ENST00000216484 ZNF341Q9BYN7 854 aa15.26■□□□□ 0.03
SPTLC2-201ENST00000216484 MRGBPQ9NV56 204 aa15.26■□□□□ 0.03
SPTLC2-201ENST00000216484 MCM8Q9UJA3 840 aa15.26■□□□□ 0.03
SPTLC2-201ENST00000216484 RWDD3Q9Y3V2 267 aa15.26■□□□□ 0.03
SPTLC2-201ENST00000216484 PPEF1O14829 653 aaPredicted RBP15.25■□□□□ 0.03
SPTLC2-201ENST00000216484 TSPAN9O75954 239 aa15.25■□□□□ 0.03
SPTLC2-201ENST00000216484 IRF1P10914 325 aa15.25■□□□□ 0.03
SPTLC2-201ENST00000216484 CCNE1P24864 410 aa15.25■□□□□ 0.03
SPTLC2-201ENST00000216484 POU4F1Q01851 419 aa15.25■□□□□ 0.03
SPTLC2-201ENST00000216484 TTC39BQ5VTQ0 682 aaPredicted RBP15.25■□□□□ 0.03
SPTLC2-201ENST00000216484 ZBTB10Q96DT7 871 aa15.25■□□□□ 0.03
SPTLC2-201ENST00000216484 PHACTR1Q9C0D0 580 aa15.25■□□□□ 0.03
SPTLC2-201ENST00000216484 ZNF23P17027 643 aa15.25■□□□□ 0.03
SPTLC2-201ENST00000216484 ZNF200P98182 395 aaPredicted RBP15.25■□□□□ 0.03
SPTLC2-201ENST00000216484 OTUD4Q01804 1114 aaKnown RBP15.25■□□□□ 0.03
SPTLC2-201ENST00000216484 MAPK11Q15759 364 aa15.25■□□□□ 0.03
SPTLC2-201ENST00000216484 LONRF1Q17RB8 773 aa15.25■□□□□ 0.03
SPTLC2-201ENST00000216484 RBBP8Q99708 897 aa15.25■□□□□ 0.03
SPTLC2-201ENST00000216484 TMCC3Q9ULS5 477 aa15.25■□□□□ 0.03
SPTLC2-201ENST00000216484 PRR23AA6NEV1 266 aa15.25■□□□□ 0.03
SPTLC2-201ENST00000216484 ZNF438Q7Z4V0 828 aa15.25■□□□□ 0.03
SPTLC2-201ENST00000216484 RAB6BQ9NRW1 208 aa15.25■□□□□ 0.03
SPTLC2-201ENST00000216484 YEATS2Q9ULM3 1422 aa15.25■□□□□ 0.03
SPTLC2-201ENST00000216484 CYP2D7A0A087X1C5 515 aa15.25■□□□□ 0.03
SPTLC2-201ENST00000216484 JAK3P52333 1124 aa15.25■□□□□ 0.03
SPTLC2-201ENST00000216484 ENKURQ8TC29 256 aa15.25■□□□□ 0.03
SPTLC2-201ENST00000216484 TPST1O60507 370 aa15.25■□□□□ 0.03
SPTLC2-201ENST00000216484 NUP107P57740 925 aa15.25■□□□□ 0.03
SPTLC2-201ENST00000216484 LGALS3BPQ08380 585 aa15.25■□□□□ 0.03
SPTLC2-201ENST00000216484 LAMB3Q13751 1172 aa15.25■□□□□ 0.03
SPTLC2-201ENST00000216484 STAT4Q14765 748 aa15.25■□□□□ 0.03
SPTLC2-201ENST00000216484 KANSL2Q9H9L4 492 aa15.25■□□□□ 0.03
SPTLC2-201ENST00000216484 PITPNM2Q9BZ72 1349 aa15.25■□□□□ 0.03
SPTLC2-201ENST00000216484 SCGNO76038 276 aa15.25■□□□□ 0.03
SPTLC2-201ENST00000216484 DHX34Q14147 1143 aaKnown RBP15.25■□□□□ 0.03
SPTLC2-201ENST00000216484 PGS1Q32NB8 556 aa15.25■□□□□ 0.03
SPTLC2-201ENST00000216484 ZNF713Q8N859 430 aaPredicted RBP15.25■□□□□ 0.03
SPTLC2-201ENST00000216484 POLR1BQ9H9Y6 1135 aa15.25■□□□□ 0.03
SPTLC2-201ENST00000216484 SMG5Q9UPR3 1016 aaKnown RBP15.25■□□□□ 0.03
SPTLC2-201ENST00000216484 KDM5BQ9UGL1 1544 aa15.25■□□□□ 0.03
SPTLC2-201ENST00000216484 ATP1A4Q13733 1029 aa15.25■□□□□ 0.03
SPTLC2-201ENST00000216484 OOSP2Q86WS3 158 aa15.25■□□□□ 0.03
SPTLC2-201ENST00000216484 STK39Q9UEW8 545 aa15.25■□□□□ 0.03
SPTLC2-201ENST00000216484 CDY2AQ9Y6F7 541 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms