RNA–Protein interactions for RNA: ENST00000214869.6

TMED1-201, Transcript of transmembrane p24 trafficking protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMED1, Length 1,340 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED1-201ENST00000214869 TOGARAM2Q6ZUX3 1019 aa16.86■□□□□ 0.29
TMED1-201ENST00000214869 CCAR2Q8N163 923 aaKnown RBP16.86■□□□□ 0.29
TMED1-201ENST00000214869 CRIPAKQ8N1N5 446 aa16.86■□□□□ 0.29
TMED1-201ENST00000214869 TTC39CQ8N584 583 aa16.86■□□□□ 0.29
TMED1-201ENST00000214869 OLIG1Q8TAK6 271 aa16.86■□□□□ 0.29
TMED1-201ENST00000214869 RSPH1Q8WYR4 309 aa16.86■□□□□ 0.29
TMED1-201ENST00000214869 ELMO3Q96BJ8 720 aa16.86■□□□□ 0.29
TMED1-201ENST00000214869 VWCEQ96DN2 955 aa16.86■□□□□ 0.29
TMED1-201ENST00000214869 SCLYQ96I15 445 aa16.86■□□□□ 0.29
TMED1-201ENST00000214869 RPS6KC1Q96S38 1066 aa16.86■□□□□ 0.29
TMED1-201ENST00000214869 ARID3AQ99856 593 aa16.86■□□□□ 0.29
TMED1-201ENST00000214869 PPP1R12CQ9BZL4 782 aa16.86■□□□□ 0.29
TMED1-201ENST00000214869 HAUS4Q9H6D7 363 aa16.86■□□□□ 0.29
TMED1-201ENST00000214869 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.86■□□□□ 0.294e-6■■■■■ 111.8
TMED1-201ENST00000214869 SPTLC3Q9NUV7 552 aa16.86■□□□□ 0.29
TMED1-201ENST00000214869 RNF216Q9NWF9 866 aaPredicted RBP16.86■□□□□ 0.29
TMED1-201ENST00000214869 PAX3P23760 479 aa16.85■□□□□ 0.29
TMED1-201ENST00000214869 RPL9P32969 192 aaKnown RBP16.85■□□□□ 0.29
TMED1-201ENST00000214869 KIF11P52732 1056 aa16.85■□□□□ 0.29
TMED1-201ENST00000214869 CCL23P55773 120 aa16.85■□□□□ 0.29
TMED1-201ENST00000214869 ARID5AQ03989 594 aa16.85■□□□□ 0.29
TMED1-201ENST00000214869 GRIK3Q13003 919 aa16.85■□□□□ 0.29
TMED1-201ENST00000214869 TCTN1Q2MV58 587 aa16.85■□□□□ 0.29
TMED1-201ENST00000214869 TDRD12Q587J7 1177 aaKnown RBP16.85■□□□□ 0.29
TMED1-201ENST00000214869 ZNF571Q7Z3V5 609 aaPredicted RBP16.85■□□□□ 0.29
TMED1-201ENST00000214869 LIMS2Q7Z4I7 341 aa16.85■□□□□ 0.29
TMED1-201ENST00000214869 RNF19AQ9NV58 838 aa16.85■□□□□ 0.29
TMED1-201ENST00000214869 MIOSQ9NXC5 875 aa16.85■□□□□ 0.29
TMED1-201ENST00000214869 NOCTQ9UK39 431 aaKnown RBP16.85■□□□□ 0.29
TMED1-201ENST00000214869 NENFQ9UMX5 172 aa16.85■□□□□ 0.29
TMED1-201ENST00000214869 PPP2R2CQ9Y2T4 447 aa16.85■□□□□ 0.29
TMED1-201ENST00000214869 FNDC1Q4ZHG4 1894 aaPredicted RBP16.84■□□□□ 0.29
TMED1-201ENST00000214869 CYP26A1O43174 497 aa16.84■□□□□ 0.29
TMED1-201ENST00000214869 ZSCAN12O43309 604 aa16.84■□□□□ 0.29
TMED1-201ENST00000214869 CCDC175P0C221 793 aa16.84■□□□□ 0.29
TMED1-201ENST00000214869 FAM163BP0C2L3 166 aa16.84■□□□□ 0.29
TMED1-201ENST00000214869 EN2P19622 333 aaPredicted RBP16.84■□□□□ 0.29
TMED1-201ENST00000214869 KRT83P78385 493 aa16.84■□□□□ 0.29
TMED1-201ENST00000214869 BMS1Q14692 1282 aaKnown RBP16.84■□□□□ 0.29
TMED1-201ENST00000214869 SLC18A3Q16572 532 aa16.84■□□□□ 0.29
TMED1-201ENST00000214869 WDR72Q3MJ13 1102 aa16.84■□□□□ 0.29
TMED1-201ENST00000214869 CNKSR3Q6P9H4 555 aa16.84■□□□□ 0.29
TMED1-201ENST00000214869 GLB1LQ6UWU2 654 aa16.84■□□□□ 0.29
TMED1-201ENST00000214869 ZNF662Q6ZS27 426 aa16.84■□□□□ 0.29
TMED1-201ENST00000214869 VPS36Q86VN1 386 aa16.84■□□□□ 0.29
TMED1-201ENST00000214869 TMEM130Q8N3G9 435 aa16.84■□□□□ 0.29
TMED1-201ENST00000214869 SLC30A5Q8TAD4 765 aa16.84■□□□□ 0.29
TMED1-201ENST00000214869 EPS8L1Q8TE68 723 aa16.84■□□□□ 0.29
TMED1-201ENST00000214869 ZNF560Q96MR9 790 aa16.84■□□□□ 0.29
TMED1-201ENST00000214869 CISHQ9NSE2 258 aa16.84■□□□□ 0.29
TMED1-201ENST00000214869 GDAP2Q9NXN4 497 aa16.84■□□□□ 0.29
TMED1-201ENST00000214869 POLIQ9UNA4 740 aa16.84■□□□□ 0.29
TMED1-201ENST00000214869 REXO2Q9Y3B8 237 aaKnown RBP16.84■□□□□ 0.29
TMED1-201ENST00000214869 ATP8B3O60423 1300 aa16.83■□□□□ 0.29
TMED1-201ENST00000214869 TRIM43BA6NCK2 446 aa16.83■□□□□ 0.28
TMED1-201ENST00000214869 PPEF2O14830 753 aa16.83■□□□□ 0.28
TMED1-201ENST00000214869 ZNF263O14978 683 aa16.83■□□□□ 0.28
TMED1-201ENST00000214869 AKR1B10O60218 316 aa16.83■□□□□ 0.28
TMED1-201ENST00000214869 SCNN1GP51170 649 aa16.83■□□□□ 0.28
TMED1-201ENST00000214869 AFF1P51825 1210 aaKnown RBP16.83■□□□□ 0.28
TMED1-201ENST00000214869 INCA1Q0VD86 236 aa16.83■□□□□ 0.28
TMED1-201ENST00000214869 CLLU1OSQ5K130 101 aa16.83■□□□□ 0.28
TMED1-201ENST00000214869 ZNF677Q86XU0 584 aa16.83■□□□□ 0.28
TMED1-201ENST00000214869 REXO1L1PQ8IX06 675 aa16.83■□□□□ 0.28
TMED1-201ENST00000214869 TRIM43Q96BQ3 446 aaPredicted RBP16.83■□□□□ 0.28
TMED1-201ENST00000214869 DDX27Q96GQ7 796 aaKnown RBP16.83■□□□□ 0.28
TMED1-201ENST00000214869 UROC1Q96N76 676 aa16.83■□□□□ 0.28
TMED1-201ENST00000214869 AGPAT1Q99943 283 aa16.83■□□□□ 0.28
TMED1-201ENST00000214869 DEF6Q9H4E7 631 aa16.83■□□□□ 0.28
TMED1-201ENST00000214869 KANSL3Q9P2N6 904 aa16.83■□□□□ 0.28
TMED1-201ENST00000214869 NXF1Q9UBU9 619 aaKnown RBP16.83■□□□□ 0.28
TMED1-201ENST00000214869 PCDHB4Q9Y5E5 795 aa16.83■□□□□ 0.28
TMED1-201ENST00000214869 A0A087X0T9 212 aa16.82■□□□□ 0.28
TMED1-201ENST00000214869 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.82■□□□□ 0.28
TMED1-201ENST00000214869 GOLGA6L9A6NEM1 432 aa16.82■□□□□ 0.28
TMED1-201ENST00000214869 HOXA2O43364 376 aa16.82■□□□□ 0.28
TMED1-201ENST00000214869 FAM228BP0C875 321 aa16.82■□□□□ 0.28
TMED1-201ENST00000214869 KRT5P13647 590 aa16.82■□□□□ 0.28
TMED1-201ENST00000214869 CYP11B1P15538 503 aa16.82■□□□□ 0.28
TMED1-201ENST00000214869 CHRNB2P17787 502 aa16.82■□□□□ 0.28
TMED1-201ENST00000214869 USP8P40818 1118 aa16.82■□□□□ 0.28
TMED1-201ENST00000214869 RGS19P49795 217 aa16.82■□□□□ 0.28
TMED1-201ENST00000214869 TAF6P49848 677 aa16.82■□□□□ 0.28
TMED1-201ENST00000214869 TUSC3Q13454 348 aa16.82■□□□□ 0.28
TMED1-201ENST00000214869 SPA17Q15506 151 aa16.82■□□□□ 0.28
TMED1-201ENST00000214869 SV2CQ496J9 727 aa16.82■□□□□ 0.28
TMED1-201ENST00000214869 C10orf76Q5T2E6 689 aa16.82■□□□□ 0.28
TMED1-201ENST00000214869 MFSD5Q6N075 450 aa16.82■□□□□ 0.28
TMED1-201ENST00000214869 RBBP8NLQ8NC74 664 aaPredicted RBP16.82■□□□□ 0.28
TMED1-201ENST00000214869 RNF169Q8NCN4 708 aa16.82■□□□□ 0.28
TMED1-201ENST00000214869 DDX1Q92499 740 aaKnown RBP16.82■□□□□ 0.28
TMED1-201ENST00000214869 DESI2Q9BSY9 194 aa16.82■□□□□ 0.28
TMED1-201ENST00000214869 SDCBP2Q9H190 292 aa16.82■□□□□ 0.28
TMED1-201ENST00000214869 KPNA7A9QM74 516 aa16.81■□□□□ 0.28
TMED1-201ENST00000214869 DDX3XO00571 662 aaKnown RBP eCLIP16.81■□□□□ 0.283e-8■■■■□ 25.2
TMED1-201ENST00000214869 IPO7O95373 1038 aaKnown RBP16.81■□□□□ 0.28
TMED1-201ENST00000214869 PFKMP08237 780 aa16.81■□□□□ 0.28
TMED1-201ENST00000214869 WEE2P0C1S8 567 aa16.81■□□□□ 0.28
TMED1-201ENST00000214869 LILRA4P59901 499 aa16.81■□□□□ 0.28
TMED1-201ENST00000214869 TNNC1P63316 161 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms