RNA–Protein interactions for RNA: ENST00000005226.11

USH1C-201, Transcript of USH1 protein network component harmonin, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USH1C, Length 2,700 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-201ENST00000005226 GPS1Q13098 491 aa14.86□□□□□ -0.03
USH1C-201ENST00000005226 NAIF1Q69YI7 327 aaPredicted RBP14.86□□□□□ -0.03
USH1C-201ENST00000005226 TXNRD3NBQ6F5E7 133 aa14.86□□□□□ -0.03
USH1C-201ENST00000005226 SEPT12Q8IYM1 358 aa14.86□□□□□ -0.03
USH1C-201ENST00000005226 BICD1Q96G01 975 aa14.86□□□□□ -0.03
USH1C-201ENST00000005226 MFSD14AQ96MC6 490 aa14.86□□□□□ -0.03
USH1C-201ENST00000005226 LRRC37BQ96QE4 947 aa14.86□□□□□ -0.03
USH1C-201ENST00000005226 MRIQ9BWK5 157 aa14.86□□□□□ -0.03
USH1C-201ENST00000005226 ZNF536O15090 1300 aa14.86□□□□□ -0.03
USH1C-201ENST00000005226 NRXN2Q9P2S2 1712 aa14.86□□□□□ -0.03
USH1C-201ENST00000005226 GOLGA8RI6L899 631 aa14.86□□□□□ -0.03
USH1C-201ENST00000005226 TLR3O15455 904 aaKnown RBP14.86□□□□□ -0.03
USH1C-201ENST00000005226 MMP10P09238 476 aa14.86□□□□□ -0.03
USH1C-201ENST00000005226 ARSEP51690 589 aa14.86□□□□□ -0.03
USH1C-201ENST00000005226 OVGP1Q12889 678 aa14.86□□□□□ -0.03
USH1C-201ENST00000005226 MKRN3Q13064 507 aaKnown RBP14.86□□□□□ -0.03
USH1C-201ENST00000005226 MAMLD1Q13495 774 aa14.86□□□□□ -0.03
USH1C-201ENST00000005226 EFTUD2Q15029 972 aaKnown RBP eCLIP14.86□□□□□ -0.03
USH1C-201ENST00000005226 SETDB1Q15047 1291 aa14.86□□□□□ -0.03
USH1C-201ENST00000005226 RHOT1Q8IXI2 618 aa14.86□□□□□ -0.03
USH1C-201ENST00000005226 ZBED8Q8IZ13 594 aa14.86□□□□□ -0.03
USH1C-201ENST00000005226 FAM13CQ8NE31 585 aa14.86□□□□□ -0.03
USH1C-201ENST00000005226 DENND1AQ8TEH3 1009 aa14.86□□□□□ -0.03
USH1C-201ENST00000005226 MAIP1Q8WWC4 291 aa14.86□□□□□ -0.03
USH1C-201ENST00000005226 CLEC4DQ8WXI8 215 aa14.86□□□□□ -0.03
USH1C-201ENST00000005226 MASTLQ96GX5 879 aa14.86□□□□□ -0.03
USH1C-201ENST00000005226 C1orf112Q9NSG2 853 aa14.86□□□□□ -0.03
USH1C-201ENST00000005226 SAE1Q9UBE0 346 aaPredicted RBP14.86□□□□□ -0.03
USH1C-201ENST00000005226 UBR3Q6ZT12 1888 aa14.86□□□□□ -0.03
USH1C-201ENST00000005226 PTPRJQ12913 1337 aa14.86□□□□□ -0.03
USH1C-201ENST00000005226 MAPK13O15264 365 aa14.86□□□□□ -0.03
USH1C-201ENST00000005226 PMM2O15305 246 aa14.86□□□□□ -0.03
USH1C-201ENST00000005226 IFNB1P01574 187 aa14.86□□□□□ -0.03
USH1C-201ENST00000005226 TNNI1P19237 187 aa14.86□□□□□ -0.03
USH1C-201ENST00000005226 CENPCQ03188 943 aa14.86□□□□□ -0.03
USH1C-201ENST00000005226 DMP1Q13316 513 aaPredicted RBP14.86□□□□□ -0.03
USH1C-201ENST00000005226 TMEM270Q6UE05 265 aa14.86□□□□□ -0.03
USH1C-201ENST00000005226 MFSD7Q6UXD7 560 aa14.86□□□□□ -0.03
USH1C-201ENST00000005226 MON1BQ7L1V2 547 aa14.86□□□□□ -0.03
USH1C-201ENST00000005226 MAP4K3Q8IVH8 894 aa14.86□□□□□ -0.03
USH1C-201ENST00000005226 TEX2Q8IWB9 1127 aa14.86□□□□□ -0.03
USH1C-201ENST00000005226 PLCD4Q9BRC7 762 aa14.86□□□□□ -0.03
USH1C-201ENST00000005226 MAK16Q9BXY0 300 aaKnown RBP14.86□□□□□ -0.03
USH1C-201ENST00000005226 TMEM39BQ9GZU3 492 aa14.86□□□□□ -0.03
USH1C-201ENST00000005226 TCEAL9Q9UHQ7 104 aa14.86□□□□□ -0.03
USH1C-201ENST00000005226 TESPA1A2RU30 521 aaPredicted RBP14.85□□□□□ -0.03
USH1C-201ENST00000005226 ENTPD5O75356 428 aa14.85□□□□□ -0.03
USH1C-201ENST00000005226 MAN1A1P33908 653 aa14.85□□□□□ -0.03
USH1C-201ENST00000005226 CAP2P40123 477 aa14.85□□□□□ -0.03
USH1C-201ENST00000005226 SLC1A1P43005 524 aa14.85□□□□□ -0.03
USH1C-201ENST00000005226 HSD17B4P51659 736 aa14.85□□□□□ -0.03
USH1C-201ENST00000005226 TRAF1Q13077 416 aa14.85□□□□□ -0.03
USH1C-201ENST00000005226 SEZ6Q53EL9 994 aa14.85□□□□□ -0.03
USH1C-201ENST00000005226 ZCCHC9Q8N567 271 aaKnown RBP14.85□□□□□ -0.03
USH1C-201ENST00000005226 SLC7A6OSQ96CW6 309 aaPredicted RBP14.85□□□□□ -0.03
USH1C-201ENST00000005226 TBC1D10AQ9BXI6 508 aa14.85□□□□□ -0.03
USH1C-201ENST00000005226 DCTN4Q9UJW0 460 aa14.85□□□□□ -0.03
USH1C-201ENST00000005226 EXOC7Q9UPT5 735 aa14.85□□□□□ -0.03
USH1C-201ENST00000005226 UBIAD1Q9Y5Z9 338 aa14.85□□□□□ -0.03
USH1C-201ENST00000005226 ANKRD31Q8N7Z5 1873 aa14.85□□□□□ -0.03
USH1C-201ENST00000005226 SLX4Q8IY92 1834 aa14.85□□□□□ -0.03
USH1C-201ENST00000005226 PEX11AO75192 247 aa14.85□□□□□ -0.03
USH1C-201ENST00000005226 CHRNA5P30532 468 aa14.85□□□□□ -0.03
USH1C-201ENST00000005226 RAD23BP54727 409 aa14.85□□□□□ -0.03
USH1C-201ENST00000005226 PLCB3Q01970 1234 aa14.85□□□□□ -0.03
USH1C-201ENST00000005226 NFX1Q12986 1120 aaKnown RBP14.85□□□□□ -0.03
USH1C-201ENST00000005226 MOGSQ13724 837 aa14.85□□□□□ -0.03
USH1C-201ENST00000005226 SUPT20HQ8NEM7 779 aa14.85□□□□□ -0.03
USH1C-201ENST00000005226 GJD4Q96KN9 370 aaPredicted RBP14.85□□□□□ -0.03
USH1C-201ENST00000005226 CEP170P1Q96L14 293 aa14.85□□□□□ -0.03
USH1C-201ENST00000005226 ST6GALNAC4Q9H4F1 302 aa14.85□□□□□ -0.03
USH1C-201ENST00000005226 NPHS2Q9NP85 383 aa14.85□□□□□ -0.03
USH1C-201ENST00000005226 AVENQ9NQS1 362 aaPredicted RBP14.85□□□□□ -0.03
USH1C-201ENST00000005226 TXLNGQ9NUQ3 528 aa14.85□□□□□ -0.03
USH1C-201ENST00000005226 PCDHB4Q9Y5E5 795 aa14.85□□□□□ -0.03
USH1C-201ENST00000005226 PCDHB2Q9Y5E7 798 aa14.85□□□□□ -0.03
USH1C-201ENST00000005226 YDJCA8MPS7 323 aa14.84□□□□□ -0.03
USH1C-201ENST00000005226 LIASO43766 372 aa14.84□□□□□ -0.03
USH1C-201ENST00000005226 HLA-DRAP01903 254 aa14.84□□□□□ -0.03
USH1C-201ENST00000005226 MYBL1P10243 752 aa14.84□□□□□ -0.03
USH1C-201ENST00000005226 PSMC5P62195 406 aa14.84□□□□□ -0.03
USH1C-201ENST00000005226 ACVR2BQ13705 512 aa14.84□□□□□ -0.03
USH1C-201ENST00000005226 SPARCL1Q14515 664 aa14.84□□□□□ -0.03
USH1C-201ENST00000005226 TAF1BQ53T94 588 aaPredicted RBP14.84□□□□□ -0.03
USH1C-201ENST00000005226 PLEKHG4Q58EX7 1191 aa14.84□□□□□ -0.03
USH1C-201ENST00000005226 LRRC8CQ8TDW0 803 aa14.84□□□□□ -0.03
USH1C-201ENST00000005226 SYTL5Q8TDW5 730 aaPredicted RBP14.84□□□□□ -0.03
USH1C-201ENST00000005226 ZBTB45Q96K62 511 aaPredicted RBP14.84□□□□□ -0.03
USH1C-201ENST00000005226 CFAP57Q96MR6 1250 aa14.84□□□□□ -0.03
USH1C-201ENST00000005226 IWS1Q96ST2 819 aa14.84□□□□□ -0.03
USH1C-201ENST00000005226 TMEM121Q9BTD3 319 aa14.84□□□□□ -0.03
USH1C-201ENST00000005226 APOBEC3GQ9HC16 384 aaKnown RBP14.84□□□□□ -0.03
USH1C-201ENST00000005226 STARD13Q9Y3M8 1113 aa14.84□□□□□ -0.03
USH1C-201ENST00000005226 USH1CQ9Y6N9 552 aa14.84□□□□□ -0.03
USH1C-201ENST00000005226 IVNS1ABPQ9Y6Y0 642 aa14.84□□□□□ -0.03
USH1C-201ENST00000005226 F8VP50 259 aa14.84□□□□□ -0.03
USH1C-201ENST00000005226 NPM3O75607 178 aaKnown RBP14.84□□□□□ -0.03
USH1C-201ENST00000005226 CYP1A1P04798 512 aaPredicted RBP14.84□□□□□ -0.03
USH1C-201ENST00000005226 GCKP35557 465 aa14.84□□□□□ -0.03
USH1C-201ENST00000005226 PDIA2Q13087 525 aaKnown RBP14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms