RNA–Protein interactions for RNA: ENSMUST00000205694.1

Rnf40-202, Transcript of E3 ubiquitin-protein ligase BRE1B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf40, Length 5,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf40-202ENSMUST00000205694 Scd4Q6T707 353 aa13.91□□□□□ -0.18
Rnf40-202ENSMUST00000205694 Tmem117Q8BH18 514 aa13.91□□□□□ -0.18
Rnf40-202ENSMUST00000205694 OtoaQ8K561 1137 aa13.91□□□□□ -0.18
Rnf40-202ENSMUST00000205694 Nsmce3Q9CPR8 279 aa13.91□□□□□ -0.18
Rnf40-202ENSMUST00000205694 CrotQ9DC50 612 aa13.91□□□□□ -0.18
Rnf40-202ENSMUST00000205694 PtsQ9R1Z7 144 aa13.91□□□□□ -0.18
Rnf40-202ENSMUST00000205694 Zfp142G5E869 1843 aa13.91□□□□□ -0.18
Rnf40-202ENSMUST00000205694 Oog1E9Q5G7 496 aa13.91□□□□□ -0.18
Rnf40-202ENSMUST00000205694 Hoxb8P09632 243 aa13.91□□□□□ -0.18
Rnf40-202ENSMUST00000205694 Slc2a4P14142 509 aa13.91□□□□□ -0.18
Rnf40-202ENSMUST00000205694 Olfm3P63056 478 aa13.91□□□□□ -0.18
Rnf40-202ENSMUST00000205694 Klhl28Q9CR40 571 aa13.91□□□□□ -0.18
Rnf40-202ENSMUST00000205694 LactbQ9EP89 551 aa13.91□□□□□ -0.18
Rnf40-202ENSMUST00000205694 PodxlQ9R0M4 503 aa13.91□□□□□ -0.18
Rnf40-202ENSMUST00000205694 Gm28961A0A087WPA5 222 aa13.91□□□□□ -0.18
Rnf40-202ENSMUST00000205694 Gm21858A0A087WQ24 222 aa13.91□□□□□ -0.18
Rnf40-202ENSMUST00000205694 Mindy4b-psA0A1W2P7H6 457 aa13.91□□□□□ -0.18
Rnf40-202ENSMUST00000205694 KitP05532 979 aa13.91□□□□□ -0.18
Rnf40-202ENSMUST00000205694 Lig1P37913 916 aa13.91□□□□□ -0.18
Rnf40-202ENSMUST00000205694 Tlx1P43345 332 aa13.91□□□□□ -0.18
Rnf40-202ENSMUST00000205694 Chrna5Q2MKA5 467 aa13.91□□□□□ -0.18
Rnf40-202ENSMUST00000205694 Zfp90Q61967 636 aa13.91□□□□□ -0.18
Rnf40-202ENSMUST00000205694 Rpn2Q9DBG6 631 aaKnown RBP13.91□□□□□ -0.18
Rnf40-202ENSMUST00000205694 Ercc4Q9QZD4 917 aa13.91□□□□□ -0.18
Rnf40-202ENSMUST00000205694 BhmtO35490 407 aaKnown RBP13.91□□□□□ -0.18
Rnf40-202ENSMUST00000205694 Slc11a2P49282 568 aa13.91□□□□□ -0.18
Rnf40-202ENSMUST00000205694 Nudt18Q3U2V3 323 aa13.91□□□□□ -0.18
Rnf40-202ENSMUST00000205694 Trim75Q3UWZ0 467 aa13.91□□□□□ -0.18
Rnf40-202ENSMUST00000205694 Stx3Q64704 289 aa13.91□□□□□ -0.18
Rnf40-202ENSMUST00000205694 Q6DFW0 481 aa13.91□□□□□ -0.18
Rnf40-202ENSMUST00000205694 Pcdha9Q91Y11 979 aa13.91□□□□□ -0.18
Rnf40-202ENSMUST00000205694 Serpinb9O08797 374 aa13.9□□□□□ -0.18
Rnf40-202ENSMUST00000205694 PtpreP49446 699 aa13.9□□□□□ -0.18
Rnf40-202ENSMUST00000205694 Rps12P63323 132 aaKnown RBP13.9□□□□□ -0.18
Rnf40-202ENSMUST00000205694 Epas1P97481 874 aa13.9□□□□□ -0.18
Rnf40-202ENSMUST00000205694 Trim47Q8C0E3 641 aa13.9□□□□□ -0.18
Rnf40-202ENSMUST00000205694 Abhd2Q9QXM0 425 aa13.9□□□□□ -0.18
Rnf40-202ENSMUST00000205694 Slc26a4Q9R155 780 aa13.9□□□□□ -0.18
Rnf40-202ENSMUST00000205694 Ism1A2ATD1 454 aa13.9□□□□□ -0.18
Rnf40-202ENSMUST00000205694 C130060K24RikG3UWA8 416 aa13.9□□□□□ -0.18
Rnf40-202ENSMUST00000205694 Sarm1Q6PDS3 724 aa13.9□□□□□ -0.18
Rnf40-202ENSMUST00000205694 Ston1Q8CDJ8 730 aa13.9□□□□□ -0.18
Rnf40-202ENSMUST00000205694 Tada2aQ8CHV6 443 aa13.9□□□□□ -0.18
Rnf40-202ENSMUST00000205694 Rmnd1Q8CI78 450 aa13.9□□□□□ -0.18
Rnf40-202ENSMUST00000205694 Mlc1Q8VHK5 382 aa13.9□□□□□ -0.18
Rnf40-202ENSMUST00000205694 Elp3Q9CZX0 547 aa13.9□□□□□ -0.18
Rnf40-202ENSMUST00000205694 Q9D1F3 157 aa13.9□□□□□ -0.18
Rnf40-202ENSMUST00000205694 Taf1dQ9D4V4 322 aa13.9□□□□□ -0.18
Rnf40-202ENSMUST00000205694 Pdk2Q9JK42 407 aa13.9□□□□□ -0.18
Rnf40-202ENSMUST00000205694 Slc22a3Q9WTW5 551 aa13.9□□□□□ -0.18
Rnf40-202ENSMUST00000205694 Klhl41A2AUC9 606 aa13.9□□□□□ -0.18
Rnf40-202ENSMUST00000205694 Gm8113E0CXS8 587 aa13.9□□□□□ -0.18
Rnf40-202ENSMUST00000205694 PrkceP16054 737 aa13.9□□□□□ -0.18
Rnf40-202ENSMUST00000205694 VcpQ01853 806 aaKnown RBP13.9□□□□□ -0.18
Rnf40-202ENSMUST00000205694 Rasip1Q3U0S6 961 aa13.9□□□□□ -0.18
Rnf40-202ENSMUST00000205694 Trappc3lQ4KL14 181 aa13.9□□□□□ -0.18
Rnf40-202ENSMUST00000205694 Ints2Q80UK8 1198 aa13.9□□□□□ -0.18
Rnf40-202ENSMUST00000205694 Grin3bQ91ZU9 1003 aa13.9□□□□□ -0.18
Rnf40-202ENSMUST00000205694 Fip1l1Q9D824 581 aaKnown RBP13.9□□□□□ -0.18
Rnf40-202ENSMUST00000205694 Cyp2s1Q9DBX6 501 aa13.9□□□□□ -0.18
Rnf40-202ENSMUST00000205694 Neu2Q9JMH3 379 aa13.9□□□□□ -0.18
Rnf40-202ENSMUST00000205694 Pdzrn4E9PUZ9 1014 aa13.9□□□□□ -0.18
Rnf40-202ENSMUST00000205694 Gm5152L7N200 190 aa13.9□□□□□ -0.18
Rnf40-202ENSMUST00000205694 Cap1P40124 474 aa13.9□□□□□ -0.18
Rnf40-202ENSMUST00000205694 PkmP52480 531 aaKnown RBP13.9□□□□□ -0.18
Rnf40-202ENSMUST00000205694 Ccdc51Q3URS9 406 aa13.9□□□□□ -0.18
Rnf40-202ENSMUST00000205694 Gucy2gQ6TL19 1100 aa13.9□□□□□ -0.18
Rnf40-202ENSMUST00000205694 Dclre1bQ8C7W7 541 aa13.9□□□□□ -0.18
Rnf40-202ENSMUST00000205694 Tnip2Q99JG7 430 aa13.9□□□□□ -0.18
Rnf40-202ENSMUST00000205694 Rgs9O54828 675 aa13.89□□□□□ -0.19
Rnf40-202ENSMUST00000205694 Stambpl1Q76N33 436 aa13.89□□□□□ -0.19
Rnf40-202ENSMUST00000205694 Ttc7aQ8BGB2 858 aa13.89□□□□□ -0.19
Rnf40-202ENSMUST00000205694 Mrps5Q99N87 432 aaKnown RBP13.89□□□□□ -0.19
Rnf40-202ENSMUST00000205694 Lsm7Q9CQQ8 103 aaKnown RBP13.89□□□□□ -0.19
Rnf40-202ENSMUST00000205694 Slfn2Q9Z0I6 378 aa13.89□□□□□ -0.19
Rnf40-202ENSMUST00000205694 Kcnq2Q9Z351 759 aa13.89□□□□□ -0.19
Rnf40-202ENSMUST00000205694 Nwd2Q6P5U7 1742 aa13.89□□□□□ -0.19
Rnf40-202ENSMUST00000205694 Akr1b10G5E895 316 aa13.89□□□□□ -0.19
Rnf40-202ENSMUST00000205694 Zbtb5Q7TQG0 670 aa13.89□□□□□ -0.19
Rnf40-202ENSMUST00000205694 Pdk1Q8BFP9 434 aaKnown RBP13.89□□□□□ -0.19
Rnf40-202ENSMUST00000205694 Xpo7Q9EPK7 1087 aa13.89□□□□□ -0.19
Rnf40-202ENSMUST00000205694 Klra17Q9JMA4 273 aa13.89□□□□□ -0.19
Rnf40-202ENSMUST00000205694 B3galt4Q9Z0F0 371 aa13.89□□□□□ -0.19
Rnf40-202ENSMUST00000205694 Krt28A6BLY7 462 aa13.89□□□□□ -0.19
Rnf40-202ENSMUST00000205694 ChrngP04760 519 aa13.89□□□□□ -0.19
Rnf40-202ENSMUST00000205694 Gjb4Q02738 266 aa13.89□□□□□ -0.19
Rnf40-202ENSMUST00000205694 Ubxn2bQ0KL01 331 aa13.89□□□□□ -0.19
Rnf40-202ENSMUST00000205694 Adgrb1Q3UHD1 1582 aa13.89□□□□□ -0.19
Rnf40-202ENSMUST00000205694 Afg1lQ3V384 480 aa13.89□□□□□ -0.19
Rnf40-202ENSMUST00000205694 Tmem232Q5K6N0 675 aa13.89□□□□□ -0.19
Rnf40-202ENSMUST00000205694 Tmem145Q8C4U2 746 aa13.89□□□□□ -0.19
Rnf40-202ENSMUST00000205694 Spice1Q8C804 860 aa13.89□□□□□ -0.19
Rnf40-202ENSMUST00000205694 Rpap3Q9D706 660 aa13.89□□□□□ -0.19
Rnf40-202ENSMUST00000205694 Prg3Q9JL95 222 aa13.89□□□□□ -0.19
Rnf40-202ENSMUST00000205694 Fbxo39Q5NBU5 443 aa13.89□□□□□ -0.19
Rnf40-202ENSMUST00000205694 Hif1aQ61221 836 aaKnown RBP13.89□□□□□ -0.19
Rnf40-202ENSMUST00000205694 CenpuQ8C4M7 410 aa13.89□□□□□ -0.19
Rnf40-202ENSMUST00000205694 Ppp2r3cQ9JK24 453 aa13.89□□□□□ -0.19
Rnf40-202ENSMUST00000205694 Rnf103Q9R1W3 683 aa13.89□□□□□ -0.19
Rnf40-202ENSMUST00000205694 Ddx39bQ9Z1N5 428 aaKnown RBP13.89□□□□□ -0.19
Retrieved 100 of 22,080 RNA–protein pairs in 52.5 ms