RNA–Protein interactions for RNA: ENSMUST00000113707.8

Tpm1-216, Transcript of Tropomyosin alpha-1 chain, mousemouse

TSL 1 (best) BASIC

Gene Tpm1, Length 1,898 nt, Biotype protein coding, Subcellular localisation Axon .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1-216ENSMUST00000113707 Tfap2bQ61313 459 aa27.38■■□□□ 1.97
Tpm1-216ENSMUST00000113707 Gpt2Q8BGT5 522 aa27.38■■□□□ 1.97
Tpm1-216ENSMUST00000113707 Efcab8Q8C9R9 203 aa27.38■■□□□ 1.97
Tpm1-216ENSMUST00000113707 Rab27aQ9ERI2 221 aa27.38■■□□□ 1.97
Tpm1-216ENSMUST00000113707 Ankrd16A2AS55 361 aa27.38■■□□□ 1.97
Tpm1-216ENSMUST00000113707 Serpinb6bO08804 377 aa27.38■■□□□ 1.97
Tpm1-216ENSMUST00000113707 Dpysl4O35098 572 aa27.38■■□□□ 1.97
Tpm1-216ENSMUST00000113707 Impa1O55023 277 aa27.38■■□□□ 1.97
Tpm1-216ENSMUST00000113707 Gnl1P36916 607 aa27.38■■□□□ 1.97
Tpm1-216ENSMUST00000113707 Mark3Q03141 753 aa27.38■■□□□ 1.97
Tpm1-216ENSMUST00000113707 Ccdc34Q3UI66 367 aa27.38■■□□□ 1.97
Tpm1-216ENSMUST00000113707 Cyp4f37Q3V1F1 546 aa27.38■■□□□ 1.97
Tpm1-216ENSMUST00000113707 CybbQ61093 570 aa27.38■■□□□ 1.97
Tpm1-216ENSMUST00000113707 Pick1Q62083 416 aa27.38■■□□□ 1.97
Tpm1-216ENSMUST00000113707 Armcx2Q6A058 784 aaKnown RBP27.38■■□□□ 1.97
Tpm1-216ENSMUST00000113707 Anks6Q6GQX6 883 aa27.38■■□□□ 1.97
Tpm1-216ENSMUST00000113707 Nim1kQ8BHI9 436 aa27.38■■□□□ 1.97
Tpm1-216ENSMUST00000113707 Trib2Q8K4K3 343 aa27.38■■□□□ 1.97
Tpm1-216ENSMUST00000113707 YarsQ91WQ3 528 aaKnown RBP27.38■■□□□ 1.97
Tpm1-216ENSMUST00000113707 Lekr1B2RVN1 116 aa27.37■■□□□ 1.97
Tpm1-216ENSMUST00000113707 ProcP33587 460 aa27.37■■□□□ 1.97
Tpm1-216ENSMUST00000113707 Gdpd4Q3TT99 632 aa27.37■■□□□ 1.97
Tpm1-216ENSMUST00000113707 Ppp2r5eQ61151 467 aa27.37■■□□□ 1.97
Tpm1-216ENSMUST00000113707 Znf784Q8BI69 297 aa27.37■■□□□ 1.97
Tpm1-216ENSMUST00000113707 Syt15Q8C6N3 418 aa27.37■■□□□ 1.97
Tpm1-216ENSMUST00000113707 Tph2Q8CGV2 488 aa27.37■■□□□ 1.97
Tpm1-216ENSMUST00000113707 Med7Q9CZB6 233 aa27.37■■□□□ 1.97
Tpm1-216ENSMUST00000113707 Exoc3l2D3YUP5 789 aa27.36■■□□□ 1.97
Tpm1-216ENSMUST00000113707 Chmp6P0C0A3 200 aa27.36■■□□□ 1.97
Tpm1-216ENSMUST00000113707 Hsd17b1P51656 344 aa27.36■■□□□ 1.97
Tpm1-216ENSMUST00000113707 Cyp2c39P56656 490 aa27.36■■□□□ 1.97
Tpm1-216ENSMUST00000113707 Smyd1P97443 490 aa27.36■■□□□ 1.97
Tpm1-216ENSMUST00000113707 HarsQ61035 509 aa27.36■■□□□ 1.97
Tpm1-216ENSMUST00000113707 Q6GQV0 436 aa27.36■■□□□ 1.97
Tpm1-216ENSMUST00000113707 Slc51bQ80WK2 128 aa27.36■■□□□ 1.97
Tpm1-216ENSMUST00000113707 Spata20Q80YT5 790 aa27.36■■□□□ 1.97
Tpm1-216ENSMUST00000113707 Apol9bQ8C7I4 310 aa27.36■■□□□ 1.97
Tpm1-216ENSMUST00000113707 Cyp2d26Q8CIM7 500 aa27.36■■□□□ 1.97
Tpm1-216ENSMUST00000113707 Apol9aQ8VDU3 310 aa27.36■■□□□ 1.97
Tpm1-216ENSMUST00000113707 Gm12394A2AKP6 982 aa27.36■■□□□ 1.97
Tpm1-216ENSMUST00000113707 Cfap221A9Q751 836 aa27.36■■□□□ 1.97
Tpm1-216ENSMUST00000113707 Abcb5B5X0E4 1255 aa27.36■■□□□ 1.97
Tpm1-216ENSMUST00000113707 Zfp174B9EJW5 407 aa27.36■■□□□ 1.97
Tpm1-216ENSMUST00000113707 Pou3f3P31361 497 aa27.36■■□□□ 1.97
Tpm1-216ENSMUST00000113707 Foxn1Q61575 648 aa27.36■■□□□ 1.97
Tpm1-216ENSMUST00000113707 Tmem145Q8C4U2 746 aa27.36■■□□□ 1.97
Tpm1-216ENSMUST00000113707 Erlin1Q91X78 346 aa27.36■■□□□ 1.97
Tpm1-216ENSMUST00000113707 Mis12Q9CY25 206 aa27.36■■□□□ 1.97
Tpm1-216ENSMUST00000113707 Scyl3Q9DBQ7 735 aa27.36■■□□□ 1.97
Tpm1-216ENSMUST00000113707 Acp4D3YTS9 425 aa27.35■■□□□ 1.97
Tpm1-216ENSMUST00000113707 Gsg1l2M0QWL6 290 aa27.35■■□□□ 1.97
Tpm1-216ENSMUST00000113707 Aimp1P31230 310 aaKnown RBP27.35■■□□□ 1.97
Tpm1-216ENSMUST00000113707 Lhx5P61375 402 aa27.35■■□□□ 1.97
Tpm1-216ENSMUST00000113707 Atp9bP98195 1146 aa27.35■■□□□ 1.97
Tpm1-216ENSMUST00000113707 Aoc2Q812C9 757 aa27.35■■□□□ 1.97
Tpm1-216ENSMUST00000113707 Csde1Q91W50 798 aaKnown RBP27.35■■□□□ 1.97
Tpm1-216ENSMUST00000113707 Ddx56Q9D0R4 546 aaKnown RBP27.35■■□□□ 1.97
Tpm1-216ENSMUST00000113707 Rexo2Q9D8S4 237 aa27.35■■□□□ 1.97
Tpm1-216ENSMUST00000113707 Rtn3Q9ES97 964 aa27.35■■□□□ 1.97
Tpm1-216ENSMUST00000113707 Trpm5Q9JJH7 1158 aa27.35■■□□□ 1.97
Tpm1-216ENSMUST00000113707 Plxnb3Q9QY40 1902 aa27.34■■□□□ 1.97
Tpm1-216ENSMUST00000113707 Hsd17b14E9Q3D4 273 aa27.34■■□□□ 1.97
Tpm1-216ENSMUST00000113707 IqceQ6PCQ0 778 aa27.34■■□□□ 1.97
Tpm1-216ENSMUST00000113707 Wdtc1Q80ZK9 677 aa27.34■■□□□ 1.97
Tpm1-216ENSMUST00000113707 Vipas39Q8BGQ1 491 aa27.34■■□□□ 1.97
Tpm1-216ENSMUST00000113707 Mical2Q8BML1 960 aa27.34■■□□□ 1.97
Tpm1-216ENSMUST00000113707 Tmem132cQ8CEF9 1099 aa27.34■■□□□ 1.97
Tpm1-216ENSMUST00000113707 Ulbp1Q8HWA3 334 aa27.34■■□□□ 1.97
Tpm1-216ENSMUST00000113707 Kcnc4Q8R1C0 628 aa27.34■■□□□ 1.97
Tpm1-216ENSMUST00000113707 Smc1aQ9CU62 1233 aaKnown RBP27.34■■□□□ 1.97
Tpm1-216ENSMUST00000113707 Tmem86aQ9D8N3 241 aa27.34■■□□□ 1.97
Tpm1-216ENSMUST00000113707 Slc12a1P55014 1095 aa27.34■■□□□ 1.97
Tpm1-216ENSMUST00000113707 Nek10Q3UGM2 1111 aa27.34■■□□□ 1.97
Tpm1-216ENSMUST00000113707 Nr2e1Q64104 385 aa27.34■■□□□ 1.97
Tpm1-216ENSMUST00000113707 Gja3Q64448 417 aa27.34■■□□□ 1.97
Tpm1-216ENSMUST00000113707 Kcnv1Q8BZN2 503 aa27.34■■□□□ 1.97
Tpm1-216ENSMUST00000113707 Gpc5Q8CAL5 572 aa27.34■■□□□ 1.97
Tpm1-216ENSMUST00000113707 Pak2Q8CIN4 524 aa27.34■■□□□ 1.97
Tpm1-216ENSMUST00000113707 CmasQ99KK2 432 aaKnown RBP27.34■■□□□ 1.97
Tpm1-216ENSMUST00000113707 Rdh14Q9ERI6 334 aa27.34■■□□□ 1.97
Tpm1-216ENSMUST00000113707 Cd86P42082 309 aa27.33■■□□□ 1.97
Tpm1-216ENSMUST00000113707 Spag7Q7TNE3 227 aaKnown RBP27.33■■□□□ 1.97
Tpm1-216ENSMUST00000113707 Tmem260Q8BMD6 703 aa27.33■■□□□ 1.97
Tpm1-216ENSMUST00000113707 C130026I21RikQ8C898 291 aa27.33■■□□□ 1.97
Tpm1-216ENSMUST00000113707 Rftn2Q8CHX7 500 aa27.33■■□□□ 1.97
Tpm1-216ENSMUST00000113707 Sbk1Q8QZX0 417 aa27.33■■□□□ 1.97
Tpm1-216ENSMUST00000113707 Setd3Q91WC0 594 aa27.33■■□□□ 1.97
Tpm1-216ENSMUST00000113707 Zfp64Q99KE8 643 aa27.33■■□□□ 1.97
Tpm1-216ENSMUST00000113707 Zmat2Q9CPW7 199 aa27.33■■□□□ 1.97
Tpm1-216ENSMUST00000113707 VasnQ9CZT5 673 aa27.33■■□□□ 1.97
Tpm1-216ENSMUST00000113707 Cntnap5aQ0V8T9 1304 aa27.33■■□□□ 1.96
Tpm1-216ENSMUST00000113707 Prpmp5E9PXN1 296 aa27.32■■□□□ 1.96
Tpm1-216ENSMUST00000113707 Gm9857F7CXR1 130 aa27.32■■□□□ 1.96
Tpm1-216ENSMUST00000113707 Ptpn11P35235 597 aa27.32■■□□□ 1.96
Tpm1-216ENSMUST00000113707 Ttc9Q3V038 219 aa27.32■■□□□ 1.96
Tpm1-216ENSMUST00000113707 Olfr670Q7TRP3 312 aa27.32■■□□□ 1.96
Tpm1-216ENSMUST00000113707 Wscd1Q80XH4 572 aa27.32■■□□□ 1.96
Tpm1-216ENSMUST00000113707 Lrsam1Q80ZI6 727 aa27.32■■□□□ 1.96
Tpm1-216ENSMUST00000113707 Snx14Q8BHY8 964 aa27.32■■□□□ 1.96
Tpm1-216ENSMUST00000113707 Adgrg3Q8R0T6 542 aa27.32■■□□□ 1.96
Retrieved 100 of 22,080 RNA–protein pairs in 20.6 ms