RNA–Protein interactions for RNA: ENSMUST00000098548.7

Scn1b-201, Transcript of Sodium channel subunit beta-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Scn1b, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1b-201ENSMUST00000098548 H6pdQ8CFX1 789 aa24.21■■□□□ 1.47
Scn1b-201ENSMUST00000098548 Plekhh3Q8VCE9 796 aa24.21■■□□□ 1.47
Scn1b-201ENSMUST00000098548 Rnf34Q99KR6 376 aa24.21■■□□□ 1.47
Scn1b-201ENSMUST00000098548 Vmn1r65Q9EPS7 332 aa24.21■■□□□ 1.47
Scn1b-201ENSMUST00000098548 Uchl3Q9JKB1 230 aa24.21■■□□□ 1.47
Scn1b-201ENSMUST00000098548 Arid2E9Q7E2 1828 aa24.21■■□□□ 1.47
Scn1b-201ENSMUST00000098548 Vmn2r121A2BE32 847 aa24.2■■□□□ 1.47
Scn1b-201ENSMUST00000098548 Zfp266E9Q2S7 604 aa24.2■■□□□ 1.47
Scn1b-201ENSMUST00000098548 Tnfrsf18O35714 228 aa24.2■■□□□ 1.47
Scn1b-201ENSMUST00000098548 IapP03975 557 aa24.2■■□□□ 1.47
Scn1b-201ENSMUST00000098548 P04214 136 aa24.2■■□□□ 1.47
Scn1b-201ENSMUST00000098548 XlrP05531 208 aa24.2■■□□□ 1.47
Scn1b-201ENSMUST00000098548 Cd163Q2VLH6 1121 aa24.2■■□□□ 1.47
Scn1b-201ENSMUST00000098548 Rpf1Q7TND5 349 aaKnown RBP24.2■■□□□ 1.47
Scn1b-201ENSMUST00000098548 Tspan18Q80WR1 248 aa24.2■■□□□ 1.47
Scn1b-201ENSMUST00000098548 RimklbQ80WS1 387 aa24.2■■□□□ 1.47
Scn1b-201ENSMUST00000098548 AsphQ8BSY0 741 aa24.2■■□□□ 1.47
Scn1b-201ENSMUST00000098548 Rint1Q8BZ36 792 aa24.2■■□□□ 1.47
Scn1b-201ENSMUST00000098548 Sash3Q8K352 380 aa24.2■■□□□ 1.47
Scn1b-201ENSMUST00000098548 Nmrk1Q91W63 195 aa24.2■■□□□ 1.47
Scn1b-201ENSMUST00000098548 Ubxn1Q922Y1 297 aa24.2■■□□□ 1.47
Scn1b-201ENSMUST00000098548 Ccdc81Q9D5W4 654 aa24.2■■□□□ 1.47
Scn1b-201ENSMUST00000098548 Chst7Q9EP78 484 aa24.2■■□□□ 1.47
Scn1b-201ENSMUST00000098548 Pdk2Q9JK42 407 aa24.2■■□□□ 1.47
Scn1b-201ENSMUST00000098548 Efcab12V9GXH0 673 aa24.2■■□□□ 1.47
Scn1b-201ENSMUST00000098548 Rp1l1Q8CGM2 1859 aa24.2■■□□□ 1.46
Scn1b-201ENSMUST00000098548 Btbd18A0A0A6YY25 723 aa24.2■■□□□ 1.46
Scn1b-201ENSMUST00000098548 Gm10801F7C7Q0 168 aa24.2■■□□□ 1.46
Scn1b-201ENSMUST00000098548 Pbx2O35984 430 aa24.2■■□□□ 1.46
Scn1b-201ENSMUST00000098548 Gna15P30678 374 aa24.2■■□□□ 1.46
Scn1b-201ENSMUST00000098548 Crtc1Q68ED7 630 aa24.2■■□□□ 1.46
Scn1b-201ENSMUST00000098548 Cyth4Q80YW0 393 aa24.2■■□□□ 1.46
Scn1b-201ENSMUST00000098548 PdclQ9DBX2 301 aa24.2■■□□□ 1.46
Scn1b-201ENSMUST00000098548 ThegQ9JMB1 375 aa24.2■■□□□ 1.46
Scn1b-201ENSMUST00000098548 Tatdn2B7ZNL9 783 aaKnown RBP24.19■■□□□ 1.46
Scn1b-201ENSMUST00000098548 Gm4297D3YWB7 211 aa24.19■■□□□ 1.46
Scn1b-201ENSMUST00000098548 Gm2030D3Z7C4 212 aa24.19■■□□□ 1.46
Scn1b-201ENSMUST00000098548 Zfp358E9Q8M1 571 aa24.19■■□□□ 1.46
Scn1b-201ENSMUST00000098548 CcnoP0C242 352 aa24.19■■□□□ 1.46
Scn1b-201ENSMUST00000098548 Pde6bP23440 856 aa24.19■■□□□ 1.46
Scn1b-201ENSMUST00000098548 Snx19Q6P4T1 997 aa24.19■■□□□ 1.46
Scn1b-201ENSMUST00000098548 Pnma2Q8BHK0 365 aa24.19■■□□□ 1.46
Scn1b-201ENSMUST00000098548 Neu4Q8BZL1 478 aa24.19■■□□□ 1.46
Scn1b-201ENSMUST00000098548 Lamtor4Q8CF66 99 aa24.19■■□□□ 1.46
Scn1b-201ENSMUST00000098548 Scrn2Q8VCA8 425 aa24.19■■□□□ 1.46
Scn1b-201ENSMUST00000098548 Pcdha9Q91Y11 979 aa24.19■■□□□ 1.46
Scn1b-201ENSMUST00000098548 Arfgap2Q99K28 520 aa24.19■■□□□ 1.46
Scn1b-201ENSMUST00000098548 Mdh1P14152 334 aa24.18■■□□□ 1.46
Scn1b-201ENSMUST00000098548 Kiaa1841Q68FF0 718 aa24.18■■□□□ 1.46
Scn1b-201ENSMUST00000098548 Frmd5Q6P5H6 517 aa24.18■■□□□ 1.46
Scn1b-201ENSMUST00000098548 Q8CEZ4 452 aa24.18■■□□□ 1.46
Scn1b-201ENSMUST00000098548 Phc3Q8CHP6 981 aa24.18■■□□□ 1.46
Scn1b-201ENSMUST00000098548 Lrrc66Q8K0B3 872 aa24.18■■□□□ 1.46
Scn1b-201ENSMUST00000098548 Mob2Q8VI63 235 aa24.18■■□□□ 1.46
Scn1b-201ENSMUST00000098548 Fuca1Q99LJ1 452 aa24.18■■□□□ 1.46
Scn1b-201ENSMUST00000098548 Adam22Q9R1V6 904 aa24.18■■□□□ 1.46
Scn1b-201ENSMUST00000098548 Ttc3O88196 1979 aaKnown RBP24.18■■□□□ 1.46
Scn1b-201ENSMUST00000098548 2210011C24RikA0A087WQ89 206 aa24.17■■□□□ 1.46
Scn1b-201ENSMUST00000098548 Gm6583E9Q8Z1 469 aa24.17■■□□□ 1.46
Scn1b-201ENSMUST00000098548 4930544D05RikJ3QK56 214 aa24.17■■□□□ 1.46
Scn1b-201ENSMUST00000098548 Cul4aQ3TCH7 759 aa24.17■■□□□ 1.46
Scn1b-201ENSMUST00000098548 Pacsin1Q61644 441 aa24.17■■□□□ 1.46
Scn1b-201ENSMUST00000098548 Armcx2Q6A058 784 aaKnown RBP24.17■■□□□ 1.46
Scn1b-201ENSMUST00000098548 Tas2r134Q7TQB0 298 aa24.17■■□□□ 1.46
Scn1b-201ENSMUST00000098548 Metap1Q8BP48 386 aaKnown RBP24.17■■□□□ 1.46
Scn1b-201ENSMUST00000098548 Pop1Q8K205 1045 aa24.17■■□□□ 1.46
Scn1b-201ENSMUST00000098548 Il17cQ8K4C5 194 aa24.17■■□□□ 1.46
Scn1b-201ENSMUST00000098548 Olfr1352Q8VGX5 309 aa24.17■■□□□ 1.46
Scn1b-201ENSMUST00000098548 Zmat2Q9CPW7 199 aa24.17■■□□□ 1.46
Scn1b-201ENSMUST00000098548 Atp1a4Q9WV27 1032 aa24.17■■□□□ 1.46
Scn1b-201ENSMUST00000098548 Rps6ka1P18653 724 aa24.16■■□□□ 1.46
Scn1b-201ENSMUST00000098548 Dpep1P31428 410 aa24.16■■□□□ 1.46
Scn1b-201ENSMUST00000098548 Cetn1P41209 172 aa24.16■■□□□ 1.46
Scn1b-201ENSMUST00000098548 Rhox12Q4TU81 186 aa24.16■■□□□ 1.46
Scn1b-201ENSMUST00000098548 Map3k11Q80XI6 850 aa24.16■■□□□ 1.46
Scn1b-201ENSMUST00000098548 IscuQ9D7P6 168 aa24.16■■□□□ 1.46
Scn1b-201ENSMUST00000098548 Doc2gQ9ESN1 387 aa24.16■■□□□ 1.46
Scn1b-201ENSMUST00000098548 Cdc42ep4Q9JM96 349 aaKnown RBP24.16■■□□□ 1.46
Scn1b-201ENSMUST00000098548 Gm45713A0A1B0GS68 446 aa24.16■■□□□ 1.46
Scn1b-201ENSMUST00000098548 Tmem240B2RWJ3 173 aa24.16■■□□□ 1.46
Scn1b-201ENSMUST00000098548 DgkhD3YXJ0 1156 aa24.16■■□□□ 1.46
Scn1b-201ENSMUST00000098548 Ccdc125Q5U465 500 aa24.16■■□□□ 1.46
Scn1b-201ENSMUST00000098548 Stxbp5Q8K400 1152 aaKnown RBP24.16■■□□□ 1.46
Scn1b-201ENSMUST00000098548 Asb11Q9CQ31 323 aa24.16■■□□□ 1.46
Scn1b-201ENSMUST00000098548 Tcirg1Q9JHF5 834 aa24.16■■□□□ 1.46
Scn1b-201ENSMUST00000098548 Trp53inp1Q9QXE4 239 aa24.16■■□□□ 1.46
Scn1b-201ENSMUST00000098548 Kcnd2Q9Z0V2 630 aa24.16■■□□□ 1.46
Scn1b-201ENSMUST00000098548 Slc23a4A0A0J9YUX7 615 aa24.15■■□□□ 1.46
Scn1b-201ENSMUST00000098548 Olfr552E9Q545 317 aa24.15■■□□□ 1.46
Scn1b-201ENSMUST00000098548 Bcl7cO08664 217 aa24.15■■□□□ 1.46
Scn1b-201ENSMUST00000098548 Xrcc5P27641 732 aa24.15■■□□□ 1.46
Scn1b-201ENSMUST00000098548 Wdr5P61965 334 aa24.15■■□□□ 1.46
Scn1b-201ENSMUST00000098548 GnsQ8BFR4 544 aa24.15■■□□□ 1.46
Scn1b-201ENSMUST00000098548 Inpp5fQ8CDA1 1132 aa24.15■■□□□ 1.46
Scn1b-201ENSMUST00000098548 YarsQ91WQ3 528 aaKnown RBP24.15■■□□□ 1.46
Scn1b-201ENSMUST00000098548 Cwh43Q91YL7 699 aa24.15■■□□□ 1.46
Scn1b-201ENSMUST00000098548 B3galt6Q91Z92 325 aa24.15■■□□□ 1.46
Scn1b-201ENSMUST00000098548 Lrrc71Q9D3W5 558 aa24.15■■□□□ 1.46
Scn1b-201ENSMUST00000098548 MesdQ9ERE7 224 aa24.15■■□□□ 1.46
Scn1b-201ENSMUST00000098548 Acox2Q9QXD1 681 aa24.15■■□□□ 1.46
Retrieved 100 of 22,080 RNA–protein pairs in 16.5 ms