RNA–Protein interactions for RNA: ENSMUST00000082209.12

Scn8a-201, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Scn8a, Length 11,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-201ENSMUST00000082209 Tldc1Q8K0P3 455 aa10.93□□□□□ -0.66
Scn8a-201ENSMUST00000082209 Mtmr4Q91XS1 1190 aa10.93□□□□□ -0.66
Scn8a-201ENSMUST00000082209 M1apQ9Z0E1 529 aa10.93□□□□□ -0.66
Scn8a-201ENSMUST00000082209 Mst1rQ62190 1378 aa10.93□□□□□ -0.66
Scn8a-201ENSMUST00000082209 Wdr49A0A0N4SUK7 710 aa10.92□□□□□ -0.66
Scn8a-201ENSMUST00000082209 Prkg1P0C605 671 aa10.92□□□□□ -0.66
Scn8a-201ENSMUST00000082209 Hspa9P38647 679 aaKnown RBP10.92□□□□□ -0.66
Scn8a-201ENSMUST00000082209 G3bp2P97379 482 aaKnown RBP10.92□□□□□ -0.66
Scn8a-201ENSMUST00000082209 Trpc1Q61056 793 aa10.92□□□□□ -0.66
Scn8a-201ENSMUST00000082209 Prpf39Q8K2Z2 665 aa10.92□□□□□ -0.66
Scn8a-201ENSMUST00000082209 Ppp6r2Q8R3Q2 923 aa10.92□□□□□ -0.66
Scn8a-201ENSMUST00000082209 Slc2a5Q9WV38 501 aa10.92□□□□□ -0.66
Scn8a-201ENSMUST00000082209 Abcb11Q9QY30 1321 aa10.92□□□□□ -0.66
Scn8a-201ENSMUST00000082209 Ccdc88aQ5SNZ0 1873 aa10.92□□□□□ -0.66
Scn8a-201ENSMUST00000082209 Zfp788E9Q980 884 aa10.92□□□□□ -0.66
Scn8a-201ENSMUST00000082209 Gm10436L7N1Y3 520 aa10.92□□□□□ -0.66
Scn8a-201ENSMUST00000082209 Clec4fP70194 548 aa10.92□□□□□ -0.66
Scn8a-201ENSMUST00000082209 Col6a1Q04857 1025 aa10.92□□□□□ -0.66
Scn8a-201ENSMUST00000082209 Atp4aQ64436 1033 aa10.92□□□□□ -0.66
Scn8a-201ENSMUST00000082209 Pcdha3Q91Y16 942 aa10.92□□□□□ -0.66
Scn8a-201ENSMUST00000082209 Gtf2h1Q9DBA9 547 aa10.92□□□□□ -0.66
Scn8a-201ENSMUST00000082209 Phf21aQ6ZPK0 659 aa10.92□□□□□ -0.66
Scn8a-201ENSMUST00000082209 Scn3bQ8BHK2 215 aa10.92□□□□□ -0.66
Scn8a-201ENSMUST00000082209 Poc5Q9DBS8 558 aa10.92□□□□□ -0.66
Scn8a-201ENSMUST00000082209 Klra17Q9JMA4 273 aa10.92□□□□□ -0.66
Scn8a-201ENSMUST00000082209 Itga9B8JK39 1036 aa10.92□□□□□ -0.66
Scn8a-201ENSMUST00000082209 Mucl2P02815 138 aa10.92□□□□□ -0.66
Scn8a-201ENSMUST00000082209 Fam160a1Q505K2 1081 aa10.92□□□□□ -0.66
Scn8a-201ENSMUST00000082209 Xpo6Q924Z6 1125 aa10.92□□□□□ -0.66
Scn8a-201ENSMUST00000082209 Capn9Q9D805 690 aa10.92□□□□□ -0.66
Scn8a-201ENSMUST00000082209 Stmn3O70166 180 aa10.92□□□□□ -0.66
Scn8a-201ENSMUST00000082209 Naa20P61600 178 aa10.92□□□□□ -0.66
Scn8a-201ENSMUST00000082209 Arhgap44Q5SSM3 814 aa10.92□□□□□ -0.66
Scn8a-201ENSMUST00000082209 Cyfip1Q7TMB8 1253 aa10.92□□□□□ -0.66
Scn8a-201ENSMUST00000082209 4921511C20RikQ8BVT7 469 aa10.92□□□□□ -0.66
Scn8a-201ENSMUST00000082209 Slc35g1Q8BY79 368 aa10.92□□□□□ -0.66
Scn8a-201ENSMUST00000082209 OplahQ8K010 1288 aa10.92□□□□□ -0.66
Scn8a-201ENSMUST00000082209 MajinQ9D992 256 aa10.92□□□□□ -0.66
Scn8a-201ENSMUST00000082209 Ap4s1Q9WVL1 144 aa10.92□□□□□ -0.66
Scn8a-201ENSMUST00000082209 Kansl3A2RSY1 903 aaKnown RBP10.92□□□□□ -0.66
Scn8a-201ENSMUST00000082209 Dab1P97318 588 aa10.92□□□□□ -0.66
Scn8a-201ENSMUST00000082209 Tmem120aQ8C1E7 343 aa10.92□□□□□ -0.66
Scn8a-201ENSMUST00000082209 Myoz2Q9JJW5 264 aa10.92□□□□□ -0.66
Scn8a-201ENSMUST00000082209 Fam83bQ0VBM2 1012 aa10.92□□□□□ -0.66
Scn8a-201ENSMUST00000082209 BegainQ68EF6 600 aa10.92□□□□□ -0.66
Scn8a-201ENSMUST00000082209 Fam214aQ69ZK7 1075 aa10.92□□□□□ -0.66
Scn8a-201ENSMUST00000082209 Kcnf1Q7TSH7 493 aa10.92□□□□□ -0.66
Scn8a-201ENSMUST00000082209 4932414N04RikQ8CEQ9 752 aa10.92□□□□□ -0.66
Scn8a-201ENSMUST00000082209 Odc1P00860 461 aa10.92□□□□□ -0.66
Scn8a-201ENSMUST00000082209 Cnot7Q60809 285 aa10.92□□□□□ -0.66
Scn8a-201ENSMUST00000082209 Arl13bQ640N2 427 aa10.92□□□□□ -0.66
Scn8a-201ENSMUST00000082209 Fam107aQ78TU8 144 aa10.92□□□□□ -0.66
Scn8a-201ENSMUST00000082209 PdgfraP26618 1089 aa10.91□□□□□ -0.66
Scn8a-201ENSMUST00000082209 Tmem120bQ3TA38 339 aa10.91□□□□□ -0.66
Scn8a-201ENSMUST00000082209 Faf2Q3TDN2 445 aa10.91□□□□□ -0.66
Scn8a-201ENSMUST00000082209 Tmem26Q3UP23 366 aa10.91□□□□□ -0.66
Scn8a-201ENSMUST00000082209 Tmem237Q3V0J1 427 aa10.91□□□□□ -0.66
Scn8a-201ENSMUST00000082209 Alg1Q921Q3 482 aa10.91□□□□□ -0.66
Scn8a-201ENSMUST00000082209 Chmp2aQ9DB34 222 aa10.91□□□□□ -0.66
Scn8a-201ENSMUST00000082209 A0A1Y7VP24 259 aa10.91□□□□□ -0.66
Scn8a-201ENSMUST00000082209 Zyg11aA2BFL2 627 aa10.91□□□□□ -0.66
Scn8a-201ENSMUST00000082209 ItgadQ3V0T4 1168 aa10.91□□□□□ -0.66
Scn8a-201ENSMUST00000082209 Dcun1d1Q9QZ73 259 aa10.91□□□□□ -0.66
Scn8a-201ENSMUST00000082209 Stk11Q9WTK7 436 aa10.91□□□□□ -0.66
Scn8a-201ENSMUST00000082209 Cdh18E9Q9Q6 790 aa10.91□□□□□ -0.66
Scn8a-201ENSMUST00000082209 Olfr67F8VPJ8 320 aa10.91□□□□□ -0.66
Scn8a-201ENSMUST00000082209 Cyp4f40G3UW81 524 aa10.91□□□□□ -0.66
Scn8a-201ENSMUST00000082209 Oas1fQ14AZ4 364 aa10.91□□□□□ -0.66
Scn8a-201ENSMUST00000082209 RubcnlQ3TD16 648 aa10.91□□□□□ -0.66
Scn8a-201ENSMUST00000082209 Raver2Q7TPD6 673 aa10.91□□□□□ -0.66
Scn8a-201ENSMUST00000082209 Zfp882E9Q4R4 555 aa10.91□□□□□ -0.66
Scn8a-201ENSMUST00000082209 Kcna1P16388 495 aa10.91□□□□□ -0.66
Scn8a-201ENSMUST00000082209 Slc11a2P49282 568 aa10.91□□□□□ -0.66
Scn8a-201ENSMUST00000082209 Rplp2P99027 115 aaKnown RBP10.91□□□□□ -0.66
Scn8a-201ENSMUST00000082209 ItgaeQ60677 1167 aa10.91□□□□□ -0.66
Scn8a-201ENSMUST00000082209 Slc26a2Q62273 739 aa10.91□□□□□ -0.66
Scn8a-201ENSMUST00000082209 ItchQ8C863 864 aa10.91□□□□□ -0.66
Scn8a-201ENSMUST00000082209 Tph2Q8CGV2 488 aa10.91□□□□□ -0.66
Scn8a-201ENSMUST00000082209 Unc5bQ8K1S3 945 aa10.91□□□□□ -0.66
Scn8a-201ENSMUST00000082209 Rpap3Q9D706 660 aa10.91□□□□□ -0.66
Scn8a-201ENSMUST00000082209 Extl2Q9ES89 330 aa10.91□□□□□ -0.66
Scn8a-201ENSMUST00000082209 1700016G14RikA0A286YCZ6 238 aa10.91□□□□□ -0.66
Scn8a-201ENSMUST00000082209 Wdr41Q3UDP0 460 aa10.91□□□□□ -0.66
Scn8a-201ENSMUST00000082209 Papd7Q6PB75 542 aa10.91□□□□□ -0.66
Scn8a-201ENSMUST00000082209 Ces4aQ8R0W5 563 aa10.91□□□□□ -0.66
Scn8a-201ENSMUST00000082209 Cox16Q9CR63 106 aa10.91□□□□□ -0.66
Scn8a-201ENSMUST00000082209 Neu2Q9JMH3 379 aa10.91□□□□□ -0.66
Scn8a-201ENSMUST00000082209 Lcn6A2AJB9 181 aa10.91□□□□□ -0.66
Scn8a-201ENSMUST00000082209 Zcchc7B1AX39 541 aa10.91□□□□□ -0.66
Scn8a-201ENSMUST00000082209 Oog1E9Q5G7 496 aa10.91□□□□□ -0.66
Scn8a-201ENSMUST00000082209 Lsp1P19973 330 aa10.91□□□□□ -0.66
Scn8a-201ENSMUST00000082209 SpdyaQ5IBH7 310 aa10.91□□□□□ -0.66
Scn8a-201ENSMUST00000082209 Casc4Q6P2L7 435 aa10.91□□□□□ -0.66
Scn8a-201ENSMUST00000082209 Bsdc1Q80Y55 427 aa10.91□□□□□ -0.66
Scn8a-201ENSMUST00000082209 Ciapin1Q8WTY4 309 aa10.91□□□□□ -0.66
Scn8a-201ENSMUST00000082209 Rec114Q9CWH4 259 aa10.91□□□□□ -0.66
Scn8a-201ENSMUST00000082209 C5P06684 1680 aa10.91□□□□□ -0.66
Scn8a-201ENSMUST00000082209 Lrrc4bP0C192 709 aa10.91□□□□□ -0.66
Scn8a-201ENSMUST00000082209 Rab17P35292 214 aa10.91□□□□□ -0.66
Scn8a-201ENSMUST00000082209 Peg10Q7TN75 958 aaKnown RBP10.91□□□□□ -0.66
Retrieved 100 of 22,080 RNA–protein pairs in 34.1 ms