RNA–Protein interactions for RNA: ENSMUST00000062606.7

Upk3b-201, Transcript of Uroplakin-3b, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upk3b, Length 3,530 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3b-201ENSMUST00000062606 Snx25Q3ZT31 840 aa12.72□□□□□ -0.37
Upk3b-201ENSMUST00000062606 Hsfy2Q80Y37 392 aa12.72□□□□□ -0.37
Upk3b-201ENSMUST00000062606 Dclk3Q8BWQ5 790 aa12.72□□□□□ -0.37
Upk3b-201ENSMUST00000062606 Lrrd1Q8C0R9 853 aa12.72□□□□□ -0.37
Upk3b-201ENSMUST00000062606 Gm5591Q8CDK1 855 aa12.72□□□□□ -0.37
Upk3b-201ENSMUST00000062606 AdpgkQ8VDL4 496 aa12.72□□□□□ -0.37
Upk3b-201ENSMUST00000062606 Vps36Q91XD6 386 aa12.72□□□□□ -0.37
Upk3b-201ENSMUST00000062606 Slc12a6Q924N4 1150 aa12.72□□□□□ -0.37
Upk3b-201ENSMUST00000062606 Eif4e3Q9DBB5 207 aa12.72□□□□□ -0.37
Upk3b-201ENSMUST00000062606 Gm9857F7CXR1 130 aa12.72□□□□□ -0.37
Upk3b-201ENSMUST00000062606 Cdh15P33146 784 aa12.72□□□□□ -0.37
Upk3b-201ENSMUST00000062606 HmmrQ00547 794 aaKnown RBP12.72□□□□□ -0.37
Upk3b-201ENSMUST00000062606 ZbbxQ0P5X5 716 aa12.72□□□□□ -0.37
Upk3b-201ENSMUST00000062606 Naf1Q3UMQ8 489 aa12.72□□□□□ -0.37
Upk3b-201ENSMUST00000062606 Hoxa13Q62424 386 aa12.72□□□□□ -0.37
Upk3b-201ENSMUST00000062606 Abcf2Q99LE6 628 aaKnown RBP12.72□□□□□ -0.37
Upk3b-201ENSMUST00000062606 Cuedc2Q9CXX9 284 aa12.72□□□□□ -0.37
Upk3b-201ENSMUST00000062606 Mgea5Q9EQQ9 916 aa12.72□□□□□ -0.37
Upk3b-201ENSMUST00000062606 Rpf2Q9JJ80 306 aaKnown RBP12.72□□□□□ -0.37
Upk3b-201ENSMUST00000062606 Col4a3Q9QZS0 1669 aa12.72□□□□□ -0.37
Upk3b-201ENSMUST00000062606 Apba1B2RUJ5 842 aa12.72□□□□□ -0.37
Upk3b-201ENSMUST00000062606 Vmn2r71L7N2D8 855 aa12.72□□□□□ -0.37
Upk3b-201ENSMUST00000062606 PurbO35295 324 aaKnown RBP12.72□□□□□ -0.37
Upk3b-201ENSMUST00000062606 Pmm1O35621 262 aa12.72□□□□□ -0.37
Upk3b-201ENSMUST00000062606 Aff2O55112 1272 aa12.72□□□□□ -0.37
Upk3b-201ENSMUST00000062606 Akap10O88845 662 aa12.72□□□□□ -0.37
Upk3b-201ENSMUST00000062606 Gbp10Q000W5 611 aa12.72□□□□□ -0.37
Upk3b-201ENSMUST00000062606 ItgaeQ60677 1167 aa12.72□□□□□ -0.37
Upk3b-201ENSMUST00000062606 Asic3Q6X1Y6 530 aa12.72□□□□□ -0.37
Upk3b-201ENSMUST00000062606 WhrnQ80VW5 918 aa12.72□□□□□ -0.37
Upk3b-201ENSMUST00000062606 Zbed4Q80WQ9 1168 aa12.72□□□□□ -0.37
Upk3b-201ENSMUST00000062606 Dpp9Q8BVG4 862 aa12.72□□□□□ -0.37
Upk3b-201ENSMUST00000062606 NkrfQ8BY02 690 aaKnown RBP12.72□□□□□ -0.37
Upk3b-201ENSMUST00000062606 AagabQ8R2R3 316 aa12.72□□□□□ -0.37
Upk3b-201ENSMUST00000062606 Slc35f6Q8VE96 372 aa12.72□□□□□ -0.37
Upk3b-201ENSMUST00000062606 GneQ91WG8 722 aaKnown RBP12.72□□□□□ -0.37
Upk3b-201ENSMUST00000062606 Sntg2Q925E0 539 aa12.72□□□□□ -0.37
Upk3b-201ENSMUST00000062606 Ppp2r2dQ925E7 453 aa12.72□□□□□ -0.37
Upk3b-201ENSMUST00000062606 Nmd3Q99L48 503 aaKnown RBP12.72□□□□□ -0.37
Upk3b-201ENSMUST00000062606 Capn9Q9D805 690 aa12.72□□□□□ -0.37
Upk3b-201ENSMUST00000062606 Sgf29Q9DA08 293 aaKnown RBP12.72□□□□□ -0.37
Upk3b-201ENSMUST00000062606 BcamQ9R069 622 aa12.72□□□□□ -0.37
Upk3b-201ENSMUST00000062606 Gabbr1Q9WV18 960 aa12.72□□□□□ -0.37
Upk3b-201ENSMUST00000062606 Taf1Q80UV9 1891 aa12.72□□□□□ -0.37
Upk3b-201ENSMUST00000062606 Gm382B1AXN3 1250 aa12.71□□□□□ -0.37
Upk3b-201ENSMUST00000062606 Nlrp12E9Q5R7 1054 aa12.71□□□□□ -0.37
Upk3b-201ENSMUST00000062606 Gm10378F6XQQ1 160 aa12.71□□□□□ -0.37
Upk3b-201ENSMUST00000062606 Fam71e2L7N480 754 aa12.71□□□□□ -0.37
Upk3b-201ENSMUST00000062606 Gm6614M0QWR8 670 aa12.71□□□□□ -0.37
Upk3b-201ENSMUST00000062606 Igf2bp1O88477 577 aaKnown RBP12.71□□□□□ -0.37
Upk3b-201ENSMUST00000062606 SarsP26638 512 aaKnown RBP12.71□□□□□ -0.37
Upk3b-201ENSMUST00000062606 Sox13Q04891 613 aa12.71□□□□□ -0.37
Upk3b-201ENSMUST00000062606 Hace1Q3U0D9 909 aa12.71□□□□□ -0.37
Upk3b-201ENSMUST00000062606 Tfe3Q64092 572 aaKnown RBP12.71□□□□□ -0.37
Upk3b-201ENSMUST00000062606 Raver2Q7TPD6 673 aa12.71□□□□□ -0.37
Upk3b-201ENSMUST00000062606 Rmdn2Q8BSE0 410 aa12.71□□□□□ -0.37
Upk3b-201ENSMUST00000062606 Tspan8Q8R3G9 235 aa12.71□□□□□ -0.37
Upk3b-201ENSMUST00000062606 Tpgs1Q99MS8 303 aa12.71□□□□□ -0.37
Upk3b-201ENSMUST00000062606 Tmed10Q9D1D4 219 aaKnown RBP12.71□□□□□ -0.37
Upk3b-201ENSMUST00000062606 Atg7Q9D906 698 aa12.71□□□□□ -0.37
Upk3b-201ENSMUST00000062606 Scgb2b12S4R2L0 112 aa12.71□□□□□ -0.37
Upk3b-201ENSMUST00000062606 Nup210lQ9D2F7 1881 aa12.71□□□□□ -0.37
Upk3b-201ENSMUST00000062606 Cyp27b1O35084 507 aa12.71□□□□□ -0.37
Upk3b-201ENSMUST00000062606 Irf3P70671 419 aa12.71□□□□□ -0.37
Upk3b-201ENSMUST00000062606 NfiaQ02780 532 aa12.71□□□□□ -0.37
Upk3b-201ENSMUST00000062606 Usp8Q80U87 1080 aa12.71□□□□□ -0.37
Upk3b-201ENSMUST00000062606 P2ry10Q8BFU7 328 aa12.71□□□□□ -0.37
Upk3b-201ENSMUST00000062606 Cdhr1Q8VHP6 859 aa12.71□□□□□ -0.37
Upk3b-201ENSMUST00000062606 Serpina16D3Z660 418 aa12.71□□□□□ -0.38
Upk3b-201ENSMUST00000062606 Gm4841E9QAA8 417 aa12.71□□□□□ -0.38
Upk3b-201ENSMUST00000062606 Lmnb2P21619 596 aaKnown RBP12.71□□□□□ -0.38
Upk3b-201ENSMUST00000062606 Shox2P70390 331 aa12.71□□□□□ -0.38
Upk3b-201ENSMUST00000062606 Tmtc1Q3UV71 942 aa12.71□□□□□ -0.38
Upk3b-201ENSMUST00000062606 Pdcd4Q61823 469 aa12.71□□□□□ -0.38
Upk3b-201ENSMUST00000062606 Tgoln2Q62314 363 aa12.71□□□□□ -0.38
Upk3b-201ENSMUST00000062606 Fam214aQ69ZK7 1075 aa12.71□□□□□ -0.38
Upk3b-201ENSMUST00000062606 Mtmr10Q7TPM9 771 aa12.71□□□□□ -0.38
Upk3b-201ENSMUST00000062606 Cyp4f39Q8BGU0 532 aa12.71□□□□□ -0.38
Upk3b-201ENSMUST00000062606 Nat14Q8BVG8 206 aa12.71□□□□□ -0.38
Upk3b-201ENSMUST00000062606 Agap1Q8BXK8 857 aaKnown RBP12.71□□□□□ -0.38
Upk3b-201ENSMUST00000062606 Thop1Q8C1A5 687 aaKnown RBP12.71□□□□□ -0.38
Upk3b-201ENSMUST00000062606 Ccdc17Q8CE13 565 aa12.71□□□□□ -0.38
Upk3b-201ENSMUST00000062606 Trmt6Q8CE96 497 aa12.71□□□□□ -0.38
Upk3b-201ENSMUST00000062606 Rhobtb2Q91V93 728 aa12.71□□□□□ -0.38
Upk3b-201ENSMUST00000062606 Lrrc49Q91YK0 686 aa12.71□□□□□ -0.38
Upk3b-201ENSMUST00000062606 3830403N18RikQ9D6C3 208 aa12.71□□□□□ -0.38
Upk3b-201ENSMUST00000062606 Kcnh7Q9ER47 1195 aa12.71□□□□□ -0.38
Upk3b-201ENSMUST00000062606 Ndufa13Q9ERS2 144 aa12.71□□□□□ -0.38
Upk3b-201ENSMUST00000062606 Nphs1Q9QZS7 1256 aa12.71□□□□□ -0.38
Upk3b-201ENSMUST00000062606 Obsl1D3YYU8 1804 aaKnown RBP12.71□□□□□ -0.38
Upk3b-201ENSMUST00000062606 LctF8VPT3 1931 aa12.7□□□□□ -0.38
Upk3b-201ENSMUST00000062606 Card9A2AIV8 536 aa12.7□□□□□ -0.38
Upk3b-201ENSMUST00000062606 Gm6583E9Q8Z1 469 aa12.7□□□□□ -0.38
Upk3b-201ENSMUST00000062606 Serpinb9eO08806 377 aa12.7□□□□□ -0.38
Upk3b-201ENSMUST00000062606 Pdlim1O70400 327 aa12.7□□□□□ -0.38
Upk3b-201ENSMUST00000062606 AladP10518 330 aa12.7□□□□□ -0.38
Upk3b-201ENSMUST00000062606 Slc39a10Q6P5F6 833 aa12.7□□□□□ -0.38
Upk3b-201ENSMUST00000062606 Zbtb5Q7TQG0 670 aa12.7□□□□□ -0.38
Upk3b-201ENSMUST00000062606 E330017A01RikQ8BU47 192 aa12.7□□□□□ -0.38
Upk3b-201ENSMUST00000062606 Ttc22Q8C159 568 aa12.7□□□□□ -0.38
Retrieved 100 of 22,080 RNA–protein pairs in 38.9 ms