RNA–Protein interactions for RNA: ENSMUST00000030992.12

Rnf4-201, Transcript of E3 ubiquitin-protein ligase RNF4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf4, Length 2,895 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4-201ENSMUST00000030992 Scarf2P59222 833 aa13.47□□□□□ -0.25
Rnf4-201ENSMUST00000030992 Apol7eQ3UZ24 369 aa13.47□□□□□ -0.25
Rnf4-201ENSMUST00000030992 Cyp3a16Q64481 504 aa13.47□□□□□ -0.25
Rnf4-201ENSMUST00000030992 Xlr3bQ6P205 226 aa13.47□□□□□ -0.25
Rnf4-201ENSMUST00000030992 Slitrk1Q810C1 696 aa13.47□□□□□ -0.25
Rnf4-201ENSMUST00000030992 Gjd4Q8BSD4 364 aa13.47□□□□□ -0.25
Rnf4-201ENSMUST00000030992 Olfr395Q8VGR3 312 aa13.47□□□□□ -0.25
Rnf4-201ENSMUST00000030992 Sec14l2Q99J08 403 aa13.47□□□□□ -0.25
Rnf4-201ENSMUST00000030992 Slc25a11Q9CR62 314 aaKnown RBP13.47□□□□□ -0.25
Rnf4-201ENSMUST00000030992 Mcur1Q9CXD6 340 aa13.47□□□□□ -0.25
Rnf4-201ENSMUST00000030992 Cacna2d3Q9Z1L5 1091 aa13.47□□□□□ -0.25
Rnf4-201ENSMUST00000030992 Arid2E9Q7E2 1828 aa13.47□□□□□ -0.25
Rnf4-201ENSMUST00000030992 Rap1gds1E9Q912 607 aa13.46□□□□□ -0.25
Rnf4-201ENSMUST00000030992 Aff1O88573 1216 aa13.46□□□□□ -0.25
Rnf4-201ENSMUST00000030992 Adcy8P97490 1249 aa13.46□□□□□ -0.25
Rnf4-201ENSMUST00000030992 Tff2Q03404 129 aa13.46□□□□□ -0.25
Rnf4-201ENSMUST00000030992 Smarcad1Q04692 1021 aa13.46□□□□□ -0.25
Rnf4-201ENSMUST00000030992 A1cfQ5YD48 595 aa13.46□□□□□ -0.25
Rnf4-201ENSMUST00000030992 Plk4Q64702 925 aa13.46□□□□□ -0.25
Rnf4-201ENSMUST00000030992 Gpc5Q8CAL5 572 aa13.46□□□□□ -0.25
Rnf4-201ENSMUST00000030992 OgtQ8CGY8 1046 aa13.46□□□□□ -0.25
Rnf4-201ENSMUST00000030992 Pkn3Q8K045 878 aa13.46□□□□□ -0.25
Rnf4-201ENSMUST00000030992 Aldh1b1Q9CZS1 519 aa13.46□□□□□ -0.25
Rnf4-201ENSMUST00000030992 Kcnk16G5E845 292 aa13.46□□□□□ -0.25
Rnf4-201ENSMUST00000030992 Gm7995L7N2E4 160 aa13.46□□□□□ -0.25
Rnf4-201ENSMUST00000030992 Usp35M0QWN7 1009 aa13.46□□□□□ -0.25
Rnf4-201ENSMUST00000030992 CopeO89079 308 aa13.46□□□□□ -0.25
Rnf4-201ENSMUST00000030992 Pid1Q3UBG2 217 aa13.46□□□□□ -0.25
Rnf4-201ENSMUST00000030992 Zfyve28Q6ZPK7 905 aa13.46□□□□□ -0.25
Rnf4-201ENSMUST00000030992 AmphQ7TQF7 686 aa13.46□□□□□ -0.25
Rnf4-201ENSMUST00000030992 Mcph1Q7TT79 822 aa13.46□□□□□ -0.25
Rnf4-201ENSMUST00000030992 Ush1gQ80T11 461 aa13.46□□□□□ -0.25
Rnf4-201ENSMUST00000030992 Dupd1Q8BK84 215 aa13.46□□□□□ -0.25
Rnf4-201ENSMUST00000030992 RalylQ8BTF8 293 aa13.46□□□□□ -0.25
Rnf4-201ENSMUST00000030992 Ccdc137Q8R0K4 290 aaKnown RBP13.46□□□□□ -0.25
Rnf4-201ENSMUST00000030992 Gadd45gQ9Z111 159 aa13.46□□□□□ -0.25
Rnf4-201ENSMUST00000030992 Robo3Q9Z2I4 1366 aa13.46□□□□□ -0.25
Rnf4-201ENSMUST00000030992 Mup10A2BIN1 180 aa13.46□□□□□ -0.26
Rnf4-201ENSMUST00000030992 Mup14A2CEK7 180 aa13.46□□□□□ -0.26
Rnf4-201ENSMUST00000030992 Mup19A9C497 187 aa13.46□□□□□ -0.26
Rnf4-201ENSMUST00000030992 Mup15A9R9W0 180 aa13.46□□□□□ -0.26
Rnf4-201ENSMUST00000030992 Mup17B5X0G2 180 aa13.46□□□□□ -0.26
Rnf4-201ENSMUST00000030992 Mup8E9PVW0 235 aa13.46□□□□□ -0.26
Rnf4-201ENSMUST00000030992 Mup7E9QA79 235 aa13.46□□□□□ -0.26
Rnf4-201ENSMUST00000030992 Mup6P02762 180 aa13.46□□□□□ -0.26
Rnf4-201ENSMUST00000030992 Mup1P11588 180 aa13.46□□□□□ -0.26
Rnf4-201ENSMUST00000030992 Mup2P11589 180 aa13.46□□□□□ -0.26
Rnf4-201ENSMUST00000030992 Serpinh1P19324 417 aaKnown RBP13.46□□□□□ -0.26
Rnf4-201ENSMUST00000030992 Aars2Q14CH7 980 aa13.46□□□□□ -0.26
Rnf4-201ENSMUST00000030992 Taok1Q5F2E8 1001 aa13.46□□□□□ -0.26
Rnf4-201ENSMUST00000030992 Acot5Q6Q2Z6 421 aa13.46□□□□□ -0.26
Rnf4-201ENSMUST00000030992 Atp6v0d2Q80SY3 350 aa13.46□□□□□ -0.26
Rnf4-201ENSMUST00000030992 Cfap36Q8C6E0 343 aa13.46□□□□□ -0.26
Rnf4-201ENSMUST00000030992 Dnm1lQ8K1M6 742 aa13.46□□□□□ -0.26
Rnf4-201ENSMUST00000030992 Themis2Q91YX0 663 aa13.46□□□□□ -0.26
Rnf4-201ENSMUST00000030992 Map4k3Q99JP0 894 aa13.46□□□□□ -0.26
Rnf4-201ENSMUST00000030992 Ddx24Q9ESV0 857 aaKnown RBP13.46□□□□□ -0.26
Rnf4-201ENSMUST00000030992 Anxa9Q9JHQ0 345 aa13.46□□□□□ -0.26
Rnf4-201ENSMUST00000030992 Slc22a3Q9WTW5 551 aa13.46□□□□□ -0.26
Rnf4-201ENSMUST00000030992 Zscan4-ps1A0A1C7CYV3 506 aa13.45□□□□□ -0.26
Rnf4-201ENSMUST00000030992 Gm5936A2BG95 728 aa13.45□□□□□ -0.26
Rnf4-201ENSMUST00000030992 Gm5640A3KG49 728 aa13.45□□□□□ -0.26
Rnf4-201ENSMUST00000030992 Zscan4dA7KBS4 506 aa13.45□□□□□ -0.26
Rnf4-201ENSMUST00000030992 Dcdc2bF7BCK0 340 aa13.45□□□□□ -0.26
Rnf4-201ENSMUST00000030992 PrkcbP68404 671 aa13.45□□□□□ -0.26
Rnf4-201ENSMUST00000030992 Creb1Q01147 341 aaKnown RBP13.45□□□□□ -0.26
Rnf4-201ENSMUST00000030992 Upf3bQ3ULL6 472 aa13.45□□□□□ -0.26
Rnf4-201ENSMUST00000030992 Zscan4fQ3URS2 506 aa13.45□□□□□ -0.26
Rnf4-201ENSMUST00000030992 Tdrd5Q5VCS6 1040 aa13.45□□□□□ -0.26
Rnf4-201ENSMUST00000030992 March4Q80TE3 409 aa13.45□□□□□ -0.26
Rnf4-201ENSMUST00000030992 Zscan4cQ80VJ6 506 aa13.45□□□□□ -0.26
Rnf4-201ENSMUST00000030992 Q80WR5 230 aa13.45□□□□□ -0.26
Rnf4-201ENSMUST00000030992 Pih1h3bQ8C6P5 218 aa13.45□□□□□ -0.26
Rnf4-201ENSMUST00000030992 Ivns1abpQ920Q8 642 aa13.45□□□□□ -0.26
Rnf4-201ENSMUST00000030992 Cdk5rap3Q99LM2 503 aa13.45□□□□□ -0.26
Rnf4-201ENSMUST00000030992 Cuedc2Q9CXX9 284 aa13.45□□□□□ -0.26
Rnf4-201ENSMUST00000030992 Cyp39a1Q9JKJ9 470 aa13.45□□□□□ -0.26
Rnf4-201ENSMUST00000030992 Tmod4Q9JLH8 345 aa13.45□□□□□ -0.26
Rnf4-201ENSMUST00000030992 Kcnd2Q9Z0V2 630 aa13.45□□□□□ -0.26
Rnf4-201ENSMUST00000030992 Thsd7bQ6P4U0 1607 aa13.45□□□□□ -0.26
Rnf4-201ENSMUST00000030992 Magea1O89006 320 aa13.45□□□□□ -0.26
Rnf4-201ENSMUST00000030992 Ass1P16460 412 aa13.45□□□□□ -0.26
Rnf4-201ENSMUST00000030992 EdnrbP48302 442 aa13.45□□□□□ -0.26
Rnf4-201ENSMUST00000030992 Hnrnph2P70333 449 aaKnown RBP13.45□□□□□ -0.26
Rnf4-201ENSMUST00000030992 Pou2f2Q00196 463 aa13.45□□□□□ -0.26
Rnf4-201ENSMUST00000030992 Pih1d3Q3KNI6 218 aa13.45□□□□□ -0.26
Rnf4-201ENSMUST00000030992 FcgrtQ61559 365 aa13.45□□□□□ -0.26
Rnf4-201ENSMUST00000030992 Ppm1fQ8CGA0 452 aa13.45□□□□□ -0.26
Rnf4-201ENSMUST00000030992 Ddx56Q9D0R4 546 aaKnown RBP13.45□□□□□ -0.26
Rnf4-201ENSMUST00000030992 ParvaQ9EPC1 372 aa13.45□□□□□ -0.26
Rnf4-201ENSMUST00000030992 Ngly1Q9JI78 651 aa13.45□□□□□ -0.26
Rnf4-201ENSMUST00000030992 Rfwd2Q9R1A8 733 aaKnown RBP13.45□□□□□ -0.26
Rnf4-201ENSMUST00000030992 Magea2Q9R2A2 320 aa13.45□□□□□ -0.26
Rnf4-201ENSMUST00000030992 Lactbl1S4R213 581 aa13.45□□□□□ -0.26
Rnf4-201ENSMUST00000030992 Ptpn3A2ALK8 913 aa13.44□□□□□ -0.26
Rnf4-201ENSMUST00000030992 AgpsQ8C0I1 645 aa13.44□□□□□ -0.26
Rnf4-201ENSMUST00000030992 CmasQ99KK2 432 aaKnown RBP13.44□□□□□ -0.26
Rnf4-201ENSMUST00000030992 Usp21Q9QZL6 566 aa13.44□□□□□ -0.26
Rnf4-201ENSMUST00000030992 Gm45837F7D3W5 961 aa13.44□□□□□ -0.26
Rnf4-201ENSMUST00000030992 CfhP06909 1234 aa13.44□□□□□ -0.26
Retrieved 100 of 22,080 RNA–protein pairs in 44.8 ms