RNA–Protein interactions for RNA: snR38

snR38, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR38, Length 95 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR38snR38 PRP43P53131 767 aaKnown RBP1.63□□□□□ -2.15
snR38snR38 ESC8Q08119 714 aa1.63□□□□□ -2.15
snR38snR38 SLA1P32790 1244 aa1.62□□□□□ -2.15
snR38snR38 ISU1Q03020 165 aa1.62□□□□□ -2.15
snR38snR38 ITT1Q04638 464 aa1.62□□□□□ -2.15
snR38snR38 MRPL16P38064 232 aa1.61□□□□□ -2.15
snR38snR38 ALG14P38242 237 aa1.61□□□□□ -2.15
snR38snR38 SSN3P39073 555 aa1.61□□□□□ -2.15
snR38snR38 CTH1P47976 325 aa1.61□□□□□ -2.15
snR38snR38 TY1A-DR2Q03964 440 aaKnown RBP1.61□□□□□ -2.15
snR38snR38 YLR122CQ12312 125 aa1.61□□□□□ -2.15
snR38snR38 SFA1P32771 386 aa1.6□□□□□ -2.15
snR38snR38 GIP4P39732 760 aa1.6□□□□□ -2.15
snR38snR38 ALA1P40825 983 aaKnown RBP1.6□□□□□ -2.15
snR38snR38 VPS70P47161 811 aa1.6□□□□□ -2.15
snR38snR38 ECL1P48235 211 aa1.6□□□□□ -2.15
snR38snR38 MAG2Q06436 670 aaKnown RBP1.6□□□□□ -2.15
snR38snR38 FRA1Q07825 749 aa1.6□□□□□ -2.15
snR38snR38 STB3Q12427 513 aa1.6□□□□□ -2.15
snR38snR38 PGM2P37012 569 aaKnown RBP1.59□□□□□ -2.15
snR38snR38 GSF2Q04697 403 aaKnown RBP1.59□□□□□ -2.15
snR38snR38 MMP1Q12372 583 aa1.59□□□□□ -2.15
snR38snR38 TY1A-DR3Q12441 440 aa1.59□□□□□ -2.15
snR38snR38 CYC7P00045 113 aa1.58□□□□□ -2.16
snR38snR38 RSC6P25632 483 aa1.58□□□□□ -2.16
snR38snR38 SAF1P38352 637 aa1.58□□□□□ -2.16
snR38snR38 HST2P53686 357 aa1.58□□□□□ -2.16
snR38snR38 ATG20Q07528 640 aa1.58□□□□□ -2.16
snR38snR38 IRE1P32361 1115 aa1.57□□□□□ -2.16
snR38snR38 SEG2P34250 1132 aa1.57□□□□□ -2.16
snR38snR38 SPR3P41901 512 aa1.57□□□□□ -2.16
snR38snR38 HDA2Q06629 674 aa1.57□□□□□ -2.16
snR38snR38 TEC1P18412 486 aa1.56□□□□□ -2.16
snR38snR38 GLN1P32288 370 aaKnown RBP1.56□□□□□ -2.16
snR38snR38 TBS1P38114 1094 aa1.56□□□□□ -2.16
snR38snR38 RRM3P38766 723 aa1.56□□□□□ -2.16
snR38snR38 FIG4P42837 879 aa1.56□□□□□ -2.16
snR38snR38 SPO74P45819 413 aa1.56□□□□□ -2.16
snR38snR38 MAM3Q12296 706 aa1.56□□□□□ -2.16
snR38snR38 PBS2P08018 668 aa1.55□□□□□ -2.16
snR38snR38 DAT1P13483 248 aaKnown RBP1.55□□□□□ -2.16
snR38snR38 NFS1P25374 497 aa1.55□□□□□ -2.16
snR38snR38 JJJ2P46997 583 aa1.55□□□□□ -2.16
snR38snR38 WTM2Q12206 467 aa1.55□□□□□ -2.16
snR38snR38 SCJ1P25303 377 aa1.54□□□□□ -2.16
snR38snR38 YML122CQ03207 126 aa1.54□□□□□ -2.16
snR38snR38 HEH2Q03281 663 aa1.54□□□□□ -2.16
snR38snR38 GAS1P22146 559 aaKnown RBP1.53□□□□□ -2.16
snR38snR38 TAF1P46677 1066 aa1.53□□□□□ -2.16
snR38snR38 GIS4Q04233 774 aa1.53□□□□□ -2.16
snR38snR38 GAS5Q08193 484 aa1.53□□□□□ -2.16
snR38snR38 PDC6P26263 563 aaKnown RBP1.52□□□□□ -2.17
snR38snR38 GUT2P32191 649 aa1.52□□□□□ -2.17
snR38snR38 UTR2P32623 467 aa1.52□□□□□ -2.17
snR38snR38 POL12P38121 705 aaPredicted RBP1.52□□□□□ -2.17
snR38snR38 CKB1P43639 278 aa1.52□□□□□ -2.17
snR38snR38 SUM1P46676 1062 aa1.52□□□□□ -2.17
snR38snR38 DFG16Q99234 619 aa1.52□□□□□ -2.17
snR38snR38 MSB1P21339 1137 aaKnown RBP1.51□□□□□ -2.17
snR38snR38 ESS1P22696 170 aa1.51□□□□□ -2.17
snR38snR38 NAR1P23503 491 aaKnown RBP1.51□□□□□ -2.17
snR38snR38 MSC7P38694 644 aa1.51□□□□□ -2.17
snR38snR38 SNM1P40993 198 aa1.51□□□□□ -2.17
snR38snR38 PSH1Q12161 406 aa1.51□□□□□ -2.17
snR38snR38 SPT2P06843 333 aaPredicted RBP1.5□□□□□ -2.17
snR38snR38 LRG1P35688 1017 aa1.5□□□□□ -2.17
snR38snR38 AKR1P39010 764 aa1.5□□□□□ -2.17
snR38snR38 UTP7P40055 554 aaKnown RBP1.5□□□□□ -2.17
snR38snR38 YTA6P40328 754 aa1.5□□□□□ -2.17
snR38snR38 PUF3Q07807 879 aaKnown RBP RIP-Chip data1.5□□□□□ -2.17not detected
snR38snR38 SLP1Q12232 587 aa1.5□□□□□ -2.17
snR38snR38 PNS1Q12412 539 aa1.5□□□□□ -2.17
snR38snR38 ARG8P18544 423 aa1.49□□□□□ -2.17
snR38snR38 NGR1P32831 672 aaKnown RBP1.49□□□□□ -2.17
snR38snR38 RSC30P38781 883 aa1.49□□□□□ -2.17
snR38snR38 IES2P40154 320 aa1.49□□□□□ -2.17
snR38snR38 NSI1Q12457 570 aa1.49□□□□□ -2.17
snR38snR38 STE20Q03497 939 aaKnown RBP1.48□□□□□ -2.17
snR38snR38 LEU1P07264 779 aaKnown RBP1.47□□□□□ -2.17
snR38snR38 RGP1P16664 663 aa1.47□□□□□ -2.17
snR38snR38 YJU3P28321 313 aa1.47□□□□□ -2.17
snR38snR38 SHM1P37292 490 aaPredicted RBP1.47□□□□□ -2.17
snR38snR38 NCL1P38205 684 aaKnown RBP1.47□□□□□ -2.17
snR38snR38 DSE4P53753 1117 aa1.47□□□□□ -2.17
snR38snR38 MSH6Q03834 1242 aa1.47□□□□□ -2.17
snR38snR38 YPR084WQ06821 456 aa1.47□□□□□ -2.17
snR38snR38 NAM7P30771 971 aaKnown RBP1.46□□□□□ -2.18
snR38snR38 FLR1P38124 548 aa1.46□□□□□ -2.18
snR38snR38 PRK1P40494 810 aa1.46□□□□□ -2.18
snR38snR38 SDH1Q00711 640 aa1.46□□□□□ -2.18
snR38snR38 PKH3Q03306 898 aaPredicted RBP1.46□□□□□ -2.18
snR38snR38 TUB2P02557 457 aaKnown RBP1.45□□□□□ -2.18
snR38snR38 ABZ1P37254 787 aaPredicted RBP1.45□□□□□ -2.18
snR38snR38 YHL008CP38750 627 aa1.45□□□□□ -2.18
snR38snR38 MRX12P47084 519 aa1.45□□□□□ -2.18
snR38snR38 ISR1Q06098 443 aaKnown RBP1.45□□□□□ -2.18
snR38snR38 TY1A-NL1Q12391 440 aaKnown RBP1.45□□□□□ -2.18
snR38snR38 PRP6P19735 899 aaPredicted RBP1.44□□□□□ -2.18
snR38snR38 NUP42P49686 430 aaKnown RBP1.44□□□□□ -2.18
snR38snR38 CDA2Q06703 312 aa1.44□□□□□ -2.18
Retrieved 100 of 5,963 RNA–protein pairs in 13.1 ms