RNA–Protein interactions for RNA: YPR108W

RPN7, Transcript of Essential non-ATPase regulatory subunit of the 26S proteasome, yeastyeast

Gene RPN7, Length 1,290 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN7YPR108W USO1P25386 1790 aa7.06□□□□□ -1.28
RPN7YPR108W NTH2P35172 780 aa7.06□□□□□ -1.28
RPN7YPR108W YIL092WP40497 633 aa7.06□□□□□ -1.28
RPN7YPR108W YPP1P46951 817 aa7.05□□□□□ -1.28
RPN7YPR108W PUF6Q04373 656 aaKnown RBP7.05□□□□□ -1.28
RPN7YPR108W TPM1P17536 199 aaKnown RBP7.04□□□□□ -1.28
RPN7YPR108W ATH1P48016 1211 aa7.04□□□□□ -1.28
RPN7YPR108W HEF3P53978 1044 aaKnown RBP7.04□□□□□ -1.28
RPN7YPR108W ATG13Q06628 738 aa7.04□□□□□ -1.28
RPN7YPR108W RTT109Q07794 436 aa7.04□□□□□ -1.28
RPN7YPR108W BMS1Q08965 1183 aaKnown RBP7.04□□□□□ -1.28
RPN7YPR108W LYS2P07702 1392 aa7.04□□□□□ -1.28
RPN7YPR108W AUS1Q08409 1394 aa7.04□□□□□ -1.28
RPN7YPR108W POL32P47110 350 aa7.03□□□□□ -1.28
RPN7YPR108W DNM1P54861 757 aa7.03□□□□□ -1.28
RPN7YPR108W NCB2Q92317 146 aa7.03□□□□□ -1.28
RPN7YPR108W RAS1P01119 309 aa7.02□□□□□ -1.29
RPN7YPR108W YNG2P38806 282 aaKnown RBP7.02□□□□□ -1.29
RPN7YPR108W YIR014WP40570 242 aa7.02□□□□□ -1.29
RPN7YPR108W GUT1P32190 709 aa7.01□□□□□ -1.29
RPN7YPR108W FUN12P39730 1002 aaKnown RBP7.01□□□□□ -1.29
RPN7YPR108W XKS1P42826 600 aa7.01□□□□□ -1.29
RPN7YPR108W SRT1Q03175 343 aa7.01□□□□□ -1.29
RPN7YPR108W COG8Q04632 607 aa7.01□□□□□ -1.29
RPN7YPR108W RPS19AP07280 144 aaKnown RBP7□□□□□ -1.29
RPN7YPR108W RPS19BP07281 144 aaPredicted RBP7□□□□□ -1.29
RPN7YPR108W SSF1P38789 453 aaPredicted RBP7□□□□□ -1.29
RPN7YPR108W MID1P41821 548 aa7□□□□□ -1.29
RPN7YPR108W YOL057WQ08225 711 aa7□□□□□ -1.29
RPN7YPR108W APC1P53886 1748 aa6.99□□□□□ -1.29
RPN7YPR108W RSF2P46974 1380 aa6.99□□□□□ -1.29
RPN7YPR108W SPT23P35210 1082 aa6.99□□□□□ -1.29
RPN7YPR108W NMD2P38798 1089 aaKnown RBP6.99□□□□□ -1.29
RPN7YPR108W SET1P38827 1080 aaKnown RBP6.99□□□□□ -1.29
RPN7YPR108W SIS2P36024 562 aa6.98□□□□□ -1.29
RPN7YPR108W VPS24P36095 224 aaKnown RBP6.98□□□□□ -1.29
RPN7YPR108W SOL3P38858 249 aa6.98□□□□□ -1.29
RPN7YPR108W YJL181WP46987 611 aa6.98□□□□□ -1.29
RPN7YPR108W MSB3P48566 633 aaPredicted RBP6.98□□□□□ -1.29
RPN7YPR108W YBP2P53169 641 aa6.98□□□□□ -1.29
RPN7YPR108W RMT2Q03305 412 aa6.98□□□□□ -1.29
RPN7YPR108W SSP2Q08646 371 aa6.98□□□□□ -1.29
RPN7YPR108W RAD50P12753 1312 aa6.98□□□□□ -1.29
RPN7YPR108W RFC1P38630 861 aaKnown RBP6.97□□□□□ -1.29
RPN7YPR108W IES2P40154 320 aa6.97□□□□□ -1.29
RPN7YPR108W CST6P40535 587 aa6.97□□□□□ -1.29
RPN7YPR108W YPL062WQ02781 134 aa6.97□□□□□ -1.29
RPN7YPR108W LAM6Q08001 693 aa6.97□□□□□ -1.29
RPN7YPR108W ROM2P51862 1356 aaKnown RBP6.96□□□□□ -1.29
RPN7YPR108W MRP7P12687 371 aa6.96□□□□□ -1.3
RPN7YPR108W YKL133CP36066 463 aa6.96□□□□□ -1.3
RPN7YPR108W YBR287WP38355 427 aa6.96□□□□□ -1.3
RPN7YPR108W ENT1Q12518 454 aa6.96□□□□□ -1.3
RPN7YPR108W COQ4O13525 335 aa6.95□□□□□ -1.3
RPN7YPR108W RAD4P14736 754 aa6.95□□□□□ -1.3
RPN7YPR108W GRX1P25373 110 aaKnown RBP6.95□□□□□ -1.3
RPN7YPR108W YPR148CQ06523 435 aa6.95□□□□□ -1.3
RPN7YPR108W NOP53Q12080 455 aaKnown RBP6.95□□□□□ -1.3
RPN7YPR108W PRP40P33203 583 aaKnown RBP6.94□□□□□ -1.3
RPN7YPR108W MNN4P36044 1178 aa6.94□□□□□ -1.3
RPN7YPR108W YRF1-2P40105 1681 aa6.93□□□□□ -1.3
RPN7YPR108W VAS1P07806 1104 aaKnown RBP6.93□□□□□ -1.3
RPN7YPR108W BDP1P46678 594 aa6.93□□□□□ -1.3
RPN7YPR108W SPO1P53541 631 aa6.93□□□□□ -1.3
RPN7YPR108W CSI1Q04368 295 aa6.93□□□□□ -1.3
RPN7YPR108W LSP1Q12230 341 aaKnown RBP6.93□□□□□ -1.3
RPN7YPR108W CLC1P17891 233 aa6.92□□□□□ -1.3
RPN7YPR108W OSM1P21375 501 aaKnown RBP6.92□□□□□ -1.3
RPN7YPR108W IMH1Q06704 911 aaKnown RBP6.92□□□□□ -1.3
RPN7YPR108W ENP2P48234 707 aaKnown RBP6.91□□□□□ -1.3
RPN7YPR108W PKH1Q03407 766 aa6.91□□□□□ -1.3
RPN7YPR108W INP54Q08227 384 aaKnown RBP6.91□□□□□ -1.3
RPN7YPR108W ENV9Q08651 330 aa6.91□□□□□ -1.3
RPN7YPR108W NUP145P49687 1317 aa6.91□□□□□ -1.3
RPN7YPR108W GCD7P32502 381 aaPredicted RBP6.9□□□□□ -1.3
RPN7YPR108W NUP133P36161 1157 aa6.9□□□□□ -1.3
RPN7YPR108W ITC1P53125 1264 aa6.9□□□□□ -1.3
RPN7YPR108W NKP2Q06162 153 aa6.9□□□□□ -1.3
RPN7YPR108W FPR4Q06205 392 aaPredicted RBP6.9□□□□□ -1.3
RPN7YPR108W ETT1Q08421 412 aaKnown RBP6.9□□□□□ -1.3
RPN7YPR108W RNR2P09938 399 aaKnown RBP6.89□□□□□ -1.31
RPN7YPR108W UBP1P25037 809 aa6.89□□□□□ -1.31
RPN7YPR108W ILV3P39522 585 aaKnown RBP6.89□□□□□ -1.31
RPN7YPR108W BOI2P39969 1040 aa6.89□□□□□ -1.31
RPN7YPR108W YJR008WP47085 338 aa6.89□□□□□ -1.31
RPN7YPR108W MLC1P53141 149 aa6.89□□□□□ -1.31
RPN7YPR108W YGR273CP53329 174 aa6.89□□□□□ -1.31
RPN7YPR108W BRE1Q07457 700 aaKnown RBP6.89□□□□□ -1.31
RPN7YPR108W PHM7Q12252 991 aa6.89□□□□□ -1.31
RPN7YPR108W FKS3Q04952 1785 aa6.88□□□□□ -1.31
RPN7YPR108W CDC16P09798 840 aa6.88□□□□□ -1.31
RPN7YPR108W IME2P32581 645 aa6.88□□□□□ -1.31
RPN7YPR108W EBP2P36049 427 aaKnown RBP6.88□□□□□ -1.31
RPN7YPR108W MTC5Q03897 1148 aa6.88□□□□□ -1.31
RPN7YPR108W DIB1Q06819 143 aaPredicted RBP6.88□□□□□ -1.31
RPN7YPR108W ALE1Q08548 619 aa6.88□□□□□ -1.31
RPN7YPR108W SNU66Q12420 587 aaPredicted RBP6.88□□□□□ -1.31
RPN7YPR108W PDR18P53756 1333 aa6.87□□□□□ -1.31
RPN7YPR108W OSH3P38713 996 aaKnown RBP6.87□□□□□ -1.31
RPN7YPR108W UBP12P39538 1254 aa6.87□□□□□ -1.31
Retrieved 100 of 5,963 RNA–protein pairs in 62.9 ms