RNA–Protein interactions for RNA: ENST00000642100.1

CASC19-279, Transcript of cancer susceptibility 19, humanhuman

Gene CASC19, Length 656 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-279ENST00000642100 TRAIPQ9BWF2 469 aa12.6□□□□□ -0.39
CASC19-279ENST00000642100 GPCPD1Q9NPB8 672 aa12.6□□□□□ -0.39
CASC19-279ENST00000642100 ATP1B4Q9UN42 357 aaPredicted RBP12.59□□□□□ -0.39
CASC19-279ENST00000642100 FNBP4Q8N3X1 1017 aaPredicted RBP12.58□□□□□ -0.4
CASC19-279ENST00000642100 KCTD17Q8N5Z5 321 aa12.58□□□□□ -0.4
CASC19-279ENST00000642100 PRIM1P49642 420 aaKnown RBP12.57□□□□□ -0.4
CASC19-279ENST00000642100 COL9A1P20849 921 aa12.56□□□□□ -0.4
CASC19-279ENST00000642100 SSTR3P32745 418 aaPredicted RBP12.56□□□□□ -0.4
CASC19-279ENST00000642100 PPP1R3GB7ZBB8 358 aa12.55□□□□□ -0.4
CASC19-279ENST00000642100 MDM2Q00987 491 aaPredicted RBP12.55□□□□□ -0.4
CASC19-279ENST00000642100 BHMG1C9JSJ3 638 aaPredicted RBP12.54□□□□□ -0.4
CASC19-279ENST00000642100 C6orf132Q5T0Z8 1188 aa12.54□□□□□ -0.4
CASC19-279ENST00000642100 POM121Q96HA1 1249 aa12.53□□□□□ -0.4
CASC19-279ENST00000642100 SPDYE5A6NIY4 337 aa12.52□□□□□ -0.41
CASC19-279ENST00000642100 RBM33Q96EV2 1170 aaKnown RBP12.52□□□□□ -0.41
CASC19-279ENST00000642100 BEGAINQ9BUH8 593 aa12.52□□□□□ -0.41
CASC19-279ENST00000642100 STAC3Q96MF2 364 aa12.51□□□□□ -0.41
CASC19-279ENST00000642100 EN1Q05925 392 aaPredicted RBP12.5□□□□□ -0.41
CASC19-279ENST00000642100 PROCA1Q8NCQ7 364 aaPredicted RBP12.5□□□□□ -0.41
CASC19-279ENST00000642100 PROX2Q3B8N5 592 aa12.49□□□□□ -0.41
CASC19-279ENST00000642100 BANK1Q8NDB2 785 aa12.48□□□□□ -0.41
CASC19-279ENST00000642100 NPDC1Q9NQX5 325 aaPredicted RBP12.48□□□□□ -0.41
CASC19-279ENST00000642100 POLR3EQ9NVU0 708 aa12.48□□□□□ -0.41
CASC19-279ENST00000642100 COG6Q9Y2V7 657 aa12.47□□□□□ -0.41
CASC19-279ENST00000642100 TSR1Q2NL82 804 aaKnown RBP12.46□□□□□ -0.41
CASC19-279ENST00000642100 AEBP1Q8IUX7 1158 aa12.46□□□□□ -0.41
CASC19-279ENST00000642100 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.46□□□□□ -0.41
CASC19-279ENST00000642100 MAP3K7O43318 606 aa12.45□□□□□ -0.42
CASC19-279ENST00000642100 KCTD12Q96CX2 325 aaKnown RBP12.45□□□□□ -0.42
CASC19-279ENST00000642100 PHOX2BQ99453 314 aa12.45□□□□□ -0.42
CASC19-279ENST00000642100 CDHR5Q9HBB8 845 aa12.45□□□□□ -0.42
CASC19-279ENST00000642100 FAM217BQ9NTX9 383 aaPredicted RBP12.45□□□□□ -0.42
CASC19-279ENST00000642100 RABGEF1Q9UJ41 708 aa12.45□□□□□ -0.42
CASC19-279ENST00000642100 HCSTQ9UBK5 93 aa12.44□□□□□ -0.42
CASC19-279ENST00000642100 ZNF330Q9Y3S2 320 aaPredicted RBP12.44□□□□□ -0.42
CASC19-279ENST00000642100 OATP04181 439 aa12.43□□□□□ -0.42
CASC19-279ENST00000642100 MYSM1Q5VVJ2 828 aa12.43□□□□□ -0.42
CASC19-279ENST00000642100 MRPL50Q8N5N7 158 aaKnown RBP12.43□□□□□ -0.42
CASC19-279ENST00000642100 NBPF3Q9H094 633 aa12.42□□□□□ -0.42
CASC19-279ENST00000642100 CLK2P49760 499 aaKnown RBP12.41□□□□□ -0.42
CASC19-279ENST00000642100 DIXDC1Q155Q3 683 aa12.41□□□□□ -0.42
CASC19-279ENST00000642100 KIAA1468Q9P260 1216 aa12.41□□□□□ -0.42
CASC19-279ENST00000642100 TMEM259Q4ZIN3 620 aa12.4□□□□□ -0.42
CASC19-279ENST00000642100 WWC1Q8IX03 1113 aa12.4□□□□□ -0.42
CASC19-279ENST00000642100 TRIM6-TRIM34B2RNG4 842 aa12.39□□□□□ -0.43
CASC19-279ENST00000642100 RFC5P40937 340 aa12.38□□□□□ -0.43
CASC19-279ENST00000642100 PDE4CQ08493 712 aa12.38□□□□□ -0.43
CASC19-279ENST00000642100 METTL3Q86U44 580 aaKnown RBP12.38□□□□□ -0.43
CASC19-279ENST00000642100 RETREG2Q8NC44 543 aa12.38□□□□□ -0.43
CASC19-279ENST00000642100 SNRKQ9NRH2 765 aa12.38□□□□□ -0.43
CASC19-279ENST00000642100 GOLGA8CPA6NN73 597 aa12.37□□□□□ -0.43
CASC19-279ENST00000642100 PPP1R15AO75807 674 aaPredicted RBP12.37□□□□□ -0.43
CASC19-279ENST00000642100 WNT2BQ93097 391 aa12.36□□□□□ -0.43
CASC19-279ENST00000642100 ACIN1Q9UKV3 1341 aaKnown RBP12.36□□□□□ -0.43
CASC19-279ENST00000642100 THSD4Q6ZMP0 1018 aa12.35□□□□□ -0.43
CASC19-279ENST00000642100 TBC1D2Q9BYX2 928 aa12.35□□□□□ -0.43
CASC19-279ENST00000642100 TSKSQ9UJT2 592 aa12.35□□□□□ -0.43
CASC19-279ENST00000642100 TMCO4Q5TGY1 634 aa12.34□□□□□ -0.43
CASC19-279ENST00000642100 LAPTM4BQ86VI4 370 aa12.34□□□□□ -0.43
CASC19-279ENST00000642100 CERKQ8TCT0 537 aa12.33□□□□□ -0.44
CASC19-279ENST00000642100 CDCA7LQ96GN5 454 aa12.33□□□□□ -0.44
CASC19-279ENST00000642100 PRM3Q9NNZ6 103 aa12.33□□□□□ -0.44
CASC19-279ENST00000642100 PTPN5P54829 565 aa12.32□□□□□ -0.44
CASC19-279ENST00000642100 PRSS12P56730 875 aa12.32□□□□□ -0.44
CASC19-279ENST00000642100 PPP2R2DQ66LE6 453 aa12.32□□□□□ -0.44
CASC19-279ENST00000642100 PXYLP1Q8TE99 480 aa12.32□□□□□ -0.44
CASC19-279ENST00000642100 SEPT9Q9UHD8 586 aaPredicted RBP12.32□□□□□ -0.44
CASC19-279ENST00000642100 FAM198AQ9UFP1 575 aa12.31□□□□□ -0.44
CASC19-279ENST00000642100 FAM161AQ3B820 660 aa12.3□□□□□ -0.44
CASC19-279ENST00000642100 PACS2Q86VP3 889 aa12.3□□□□□ -0.44
CASC19-279ENST00000642100 CALR3Q96L12 384 aaKnown RBP12.3□□□□□ -0.44
CASC19-279ENST00000642100 NLRP7Q8WX94 980 aa12.29□□□□□ -0.44
CASC19-279ENST00000642100 ZFRQ96KR1 1074 aaKnown RBP12.29□□□□□ -0.44
CASC19-279ENST00000642100 GZF1Q9H116 711 aaPredicted RBP12.29□□□□□ -0.44
CASC19-279ENST00000642100 GDPD2Q9HCC8 539 aa12.29□□□□□ -0.44
CASC19-279ENST00000642100 ADGRG1Q9Y653 693 aa12.29□□□□□ -0.44
CASC19-279ENST00000642100 IRF5Q13568 498 aa12.28□□□□□ -0.44
CASC19-279ENST00000642100 RGS22Q8NE09 1264 aa12.28□□□□□ -0.44
CASC19-279ENST00000642100 PATL2C9JE40 543 aaKnown RBP12.27□□□□□ -0.45
CASC19-279ENST00000642100 SOCS7O14512 581 aa12.27□□□□□ -0.45
CASC19-279ENST00000642100 FAM98CQ17RN3 349 aaKnown RBP12.27□□□□□ -0.45
CASC19-279ENST00000642100 ANKK1Q8NFD2 765 aa12.27□□□□□ -0.45
CASC19-279ENST00000642100 TUSC1Q2TAM9 212 aa12.26□□□□□ -0.45
CASC19-279ENST00000642100 PADI6Q6TGC4 694 aa12.26□□□□□ -0.45
CASC19-279ENST00000642100 RIC3Q7Z5B4 369 aa12.26□□□□□ -0.45
CASC19-279ENST00000642100 PLA2G2EQ9NZK7 142 aa12.26□□□□□ -0.45
CASC19-279ENST00000642100 LIMD1Q9UGP4 676 aa12.26□□□□□ -0.45
CASC19-279ENST00000642100 C3orf80F5H4A9 247 aa12.25□□□□□ -0.45
CASC19-279ENST00000642100 MTMR14Q8NCE2 650 aa12.25□□□□□ -0.45
CASC19-279ENST00000642100 SOWAHBA6NEL2 793 aa12.24□□□□□ -0.45
CASC19-279ENST00000642100 BCAMP50895 628 aa12.24□□□□□ -0.45
CASC19-279ENST00000642100 MFAP1P55081 439 aaKnown RBP12.24□□□□□ -0.45
CASC19-279ENST00000642100 RBM27Q9P2N5 1060 aaKnown RBP12.24□□□□□ -0.45
CASC19-279ENST00000642100 ABL2P42684 1182 aa12.23□□□□□ -0.45
CASC19-279ENST00000642100 TTC13Q8NBP0 860 aa12.23□□□□□ -0.45
CASC19-279ENST00000642100 SMAPO00193 183 aa12.22□□□□□ -0.45
CASC19-279ENST00000642100 FBXO31Q5XUX0 539 aaPredicted RBP12.22□□□□□ -0.45
CASC19-279ENST00000642100 RBM46Q8TBY0 533 aaKnown RBP12.22□□□□□ -0.45
CASC19-279ENST00000642100 TATDN2Q93075 761 aa12.22□□□□□ -0.45
CASC19-279ENST00000642100 MTMR7Q9Y216 660 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms