RNA–Protein interactions for RNA: ENST00000641947.1

PHGDH-232, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,774 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-232ENST00000641947 IQGAP1P46940 1657 aa24.78■■□□□ 1.56
PHGDH-232ENST00000641947 WASHC2AQ641Q2 1341 aa24.78■■□□□ 1.56
PHGDH-232ENST00000641947 ADGRF5Q8IZF2 1346 aa24.77■■□□□ 1.56
PHGDH-232ENST00000641947 DDX10Q13206 875 aaKnown RBP24.77■■□□□ 1.56
PHGDH-232ENST00000641947 ZMYM3Q14202 1370 aa24.76■■□□□ 1.55
PHGDH-232ENST00000641947 STAC3Q96MF2 364 aa24.75■■□□□ 1.55
PHGDH-232ENST00000641947 SLC52A1Q9NWF4 448 aa24.75■■□□□ 1.55
PHGDH-232ENST00000641947 MIER1Q8N108 512 aa24.75■■□□□ 1.55
PHGDH-232ENST00000641947 C3P01024 1663 aa24.73■■□□□ 1.55
PHGDH-232ENST00000641947 CCDC7Q96M83 1385 aa24.71■■□□□ 1.55
PHGDH-232ENST00000641947 PIK3C2GO75747 1445 aa24.7■■□□□ 1.54
PHGDH-232ENST00000641947 ESF1Q9H501 851 aaKnown RBP24.7■■□□□ 1.54
PHGDH-232ENST00000641947 RPGRIP1LQ68CZ1 1315 aa24.68■■□□□ 1.54
PHGDH-232ENST00000641947 ST20-MTHFSA0A0A6YYL1 179 aa24.68■■□□□ 1.54
PHGDH-232ENST00000641947 KIF7Q2M1P5 1343 aa24.67■■□□□ 1.54
PHGDH-232ENST00000641947 CFAP70Q5T0N1 1121 aa24.65■■□□□ 1.54
PHGDH-232ENST00000641947 A2ML1A8K2U0 1454 aa24.65■■□□□ 1.54
PHGDH-232ENST00000641947 NUTM2DQ5VT03 806 aaPredicted RBP24.64■■□□□ 1.53
PHGDH-232ENST00000641947 SETBP1Q9Y6X0 1596 aa24.63■■□□□ 1.53
PHGDH-232ENST00000641947 UBR1Q8IWV7 1749 aa24.62■■□□□ 1.53
PHGDH-232ENST00000641947 ADGRB1O14514 1584 aa24.61■■□□□ 1.53
PHGDH-232ENST00000641947 SCAF11Q99590 1463 aaKnown RBP24.61■■□□□ 1.53
PHGDH-232ENST00000641947 TNRQ92752 1358 aa24.61■■□□□ 1.53
PHGDH-232ENST00000641947 ZFYVE9O95405 1425 aa24.6■■□□□ 1.53
PHGDH-232ENST00000641947 KDM5AP29375 1690 aaKnown RBP24.6■■□□□ 1.53
PHGDH-232ENST00000641947 RIMS1Q86UR5 1692 aaKnown RBP24.6■■□□□ 1.53
PHGDH-232ENST00000641947 CEBPAP49715 358 aaPredicted RBP24.59■■□□□ 1.53
PHGDH-232ENST00000641947 ADAMTSL3P82987 1691 aa24.58■■□□□ 1.53
PHGDH-232ENST00000641947 TESK2Q96S53 571 aa24.57■■□□□ 1.52
PHGDH-232ENST00000641947 C14orf93Q9H972 538 aaKnown RBP24.56■■□□□ 1.52
PHGDH-232ENST00000641947 ASXL1Q8IXJ9 1541 aa24.55■■□□□ 1.52
PHGDH-232ENST00000641947 MYO3AQ8NEV4 1616 aa24.55■■□□□ 1.52
PHGDH-232ENST00000641947 VGFO15240 615 aaPredicted RBP24.54■■□□□ 1.52
PHGDH-232ENST00000641947 STAG3Q9UJ98 1225 aa24.53■■□□□ 1.52
PHGDH-232ENST00000641947 DISP3Q9P2K9 1392 aa24.52■■□□□ 1.52
PHGDH-232ENST00000641947 SETD1AO15047 1707 aaKnown RBP24.52■■□□□ 1.52
PHGDH-232ENST00000641947 RIMS2Q9UQ26 1411 aa24.52■■□□□ 1.52
PHGDH-232ENST00000641947 ARHGEF28Q8N1W1 1705 aaKnown RBP24.51■■□□□ 1.51
PHGDH-232ENST00000641947 NRXN3Q9Y4C0 1643 aa24.5■■□□□ 1.51
PHGDH-232ENST00000641947 NLRP1Q9C000 1473 aa24.49■■□□□ 1.51
PHGDH-232ENST00000641947 SENP3Q9H4L4 574 aaPredicted RBP24.49■■□□□ 1.51
PHGDH-232ENST00000641947 ALKQ9UM73 1620 aa24.48■■□□□ 1.51
PHGDH-232ENST00000641947 TMEM132EQ6IEE7 984 aa24.48■■□□□ 1.51
PHGDH-232ENST00000641947 POLR3GLQ9BT43 218 aa24.47■■□□□ 1.51
PHGDH-232ENST00000641947 QRICH2Q9H0J4 1663 aa24.47■■□□□ 1.51
PHGDH-232ENST00000641947 PLPPR3Q6T4P5 718 aa24.47■■□□□ 1.51
PHGDH-232ENST00000641947 EIF3AQ14152 1382 aaKnown RBP24.46■■□□□ 1.51
PHGDH-232ENST00000641947 PTPRMP28827 1452 aa24.45■■□□□ 1.5
PHGDH-232ENST00000641947 MYOM1P52179 1685 aa24.41■■□□□ 1.5
PHGDH-232ENST00000641947 TMEM2Q9UHN6 1383 aa24.4■■□□□ 1.5
PHGDH-232ENST00000641947 TRAK1Q9UPV9 953 aa24.4■■□□□ 1.5
PHGDH-232ENST00000641947 TMF1P82094 1093 aa24.39■■□□□ 1.49
PHGDH-232ENST00000641947 ANP32CO43423 234 aa24.38■■□□□ 1.49
PHGDH-232ENST00000641947 CEP170BQ9Y4F5 1589 aaPredicted RBP24.36■■□□□ 1.49
PHGDH-232ENST00000641947 SLIT1O75093 1534 aa24.36■■□□□ 1.49
PHGDH-232ENST00000641947 ZNF142P52746 1687 aaPredicted RBP24.35■■□□□ 1.49
PHGDH-232ENST00000641947 SBNO2Q9Y2G9 1366 aa24.35■■□□□ 1.49
PHGDH-232ENST00000641947 ARHGAP23Q9P227 1491 aa24.35■■□□□ 1.49
PHGDH-232ENST00000641947 YTHDC2Q9H6S0 1430 aaKnown RBP24.35■■□□□ 1.49
PHGDH-232ENST00000641947 CENPJQ9HC77 1338 aaPredicted RBP24.34■■□□□ 1.49
PHGDH-232ENST00000641947 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.33■■□□□ 1.49
PHGDH-232ENST00000641947 LTKP29376 864 aa24.31■■□□□ 1.48
PHGDH-232ENST00000641947 SETD1BQ9UPS6 1966 aaKnown RBP24.3■■□□□ 1.48
PHGDH-232ENST00000641947 STK26Q9P289 416 aa24.29■■□□□ 1.48
PHGDH-232ENST00000641947 TULP4Q9NRJ4 1543 aa24.29■■□□□ 1.48
PHGDH-232ENST00000641947 KNDC1Q76NI1 1749 aa24.28■■□□□ 1.48
PHGDH-232ENST00000641947 ADAMTS13Q76LX8 1427 aa24.27■■□□□ 1.48
PHGDH-232ENST00000641947 PRKRIP1Q9H875 184 aaPredicted RBP24.27■■□□□ 1.48
PHGDH-232ENST00000641947 METP08581 1390 aa24.27■■□□□ 1.48
PHGDH-232ENST00000641947 PLEKHG1Q9ULL1 1385 aa24.26■■□□□ 1.47
PHGDH-232ENST00000641947 DLC1Q96QB1 1528 aa24.25■■□□□ 1.47
PHGDH-232ENST00000641947 CCER2I3L3R5 266 aa24.25■■□□□ 1.47
PHGDH-232ENST00000641947 HDGFP51858 240 aaKnown RBP24.24■■□□□ 1.47
PHGDH-232ENST00000641947 YTHDC1Q96MU7 727 aaKnown RBP24.24■■□□□ 1.47
PHGDH-232ENST00000641947 LRPPRCP42704 1394 aaKnown RBP24.24■■□□□ 1.47
PHGDH-232ENST00000641947 MED14O60244 1454 aa24.23■■□□□ 1.47
PHGDH-232ENST00000641947 TXNDC2Q86VQ3 553 aa24.22■■□□□ 1.47
PHGDH-232ENST00000641947 PER1O15534 1290 aaPredicted RBP24.21■■□□□ 1.47
PHGDH-232ENST00000641947 CDCA8Q53HL2 280 aa24.21■■□□□ 1.47
PHGDH-232ENST00000641947 THEMISQ8N1K5 641 aaPredicted RBP24.21■■□□□ 1.47
PHGDH-232ENST00000641947 PANK3Q9H999 370 aa24.21■■□□□ 1.47
PHGDH-232ENST00000641947 SAFB2Q14151 953 aaKnown RBP eCLIP24.2■■□□□ 1.46
PHGDH-232ENST00000641947 PRAM1Q96QH2 718 aa24.19■■□□□ 1.46
PHGDH-232ENST00000641947 CPS1P31327 1500 aa24.19■■□□□ 1.46
PHGDH-232ENST00000641947 SLC24A1O60721 1099 aa24.19■■□□□ 1.46
PHGDH-232ENST00000641947 ABCC11Q96J66 1382 aa24.18■■□□□ 1.46
PHGDH-232ENST00000641947 PLEKHH1Q9ULM0 1364 aa24.17■■□□□ 1.46
PHGDH-232ENST00000641947 CNGB1Q14028 1251 aaPredicted RBP24.17■■□□□ 1.46
PHGDH-232ENST00000641947 TECPR2O15040 1411 aa24.17■■□□□ 1.46
PHGDH-232ENST00000641947 EID1Q9Y6B2 187 aa24.16■■□□□ 1.46
PHGDH-232ENST00000641947 CCDC184Q52MB2 194 aa24.16■■□□□ 1.46
PHGDH-232ENST00000641947 BCANQ96GW7 911 aa24.15■■□□□ 1.46
PHGDH-232ENST00000641947 DIP2AQ14689 1571 aa24.14■■□□□ 1.45
PHGDH-232ENST00000641947 PTPRUQ92729 1446 aa24.13■■□□□ 1.45
PHGDH-232ENST00000641947 WAPLQ7Z5K2 1190 aa24.13■■□□□ 1.45
PHGDH-232ENST00000641947 MINK1Q8N4C8 1332 aaPredicted RBP24.12■■□□□ 1.45
PHGDH-232ENST00000641947 POGKQ9P215 609 aa24.12■■□□□ 1.45
PHGDH-232ENST00000641947 EVC2Q86UK5 1308 aa24.12■■□□□ 1.45
PHGDH-232ENST00000641947 SLC26A8Q96RN1 970 aa24.11■■□□□ 1.45
PHGDH-232ENST00000641947 PARD3Q8TEW0 1356 aa24.09■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms