RNA–Protein interactions for RNA: ENST00000641923.1

SAMMSON-223, survival associated mitochondrial melanoma specific oncogenic non-coding RNA, human

Gene SAMMSON, Length 1,213 nt, Biotype lincRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SAMMSON-223	ENST00000641923	HDGF	P51858	240 aa	Known RBP	12.98	□□□□□ -0.33
SAMMSON-223	ENST00000641923	STAG3	Q9UJ98	1225 aa		12.98	□□□□□ -0.33
SAMMSON-223	ENST00000641923	RPGRIP1L	Q68CZ1	1315 aa		12.97	□□□□□ -0.33
SAMMSON-223	ENST00000641923	CEBPA	P49715	358 aa	Predicted RBP	12.97	□□□□□ -0.33
SAMMSON-223	ENST00000641923	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	12.97	□□□□□ -0.33
SAMMSON-223	ENST00000641923	UGGT1	Q9NYU2	1555 aa		12.96	□□□□□ -0.33
SAMMSON-223	ENST00000641923	IDI1	Q13907	227 aa		12.96	□□□□□ -0.33
SAMMSON-223	ENST00000641923	TONSL	Q96HA7	1378 aa		12.95	□□□□□ -0.34
SAMMSON-223	ENST00000641923	ZEB1	P37275	1124 aa	Predicted RBP	12.95	□□□□□ -0.34
SAMMSON-223	ENST00000641923	THEMIS	Q8N1K5	641 aa	Predicted RBP	12.95	□□□□□ -0.34
SAMMSON-223	ENST00000641923	TMEM131L	A2VDJ0	1609 aa		12.95	□□□□□ -0.34
SAMMSON-223	ENST00000641923	UBR1	Q8IWV7	1749 aa		12.94	□□□□□ -0.34
SAMMSON-223	ENST00000641923	C1QBP	Q07021	282 aa	Known RBP	12.94	□□□□□ -0.34
SAMMSON-223	ENST00000641923	SPATA31E1	Q6ZUB1	1445 aa		12.94	□□□□□ -0.34
SAMMSON-223	ENST00000641923	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	12.93	□□□□□ -0.34
SAMMSON-223	ENST00000641923	CHGA	P10645	457 aa	Known RBP	12.91	□□□□□ -0.34
SAMMSON-223	ENST00000641923	SLIT1	O75093	1534 aa		12.91	□□□□□ -0.34
SAMMSON-223	ENST00000641923	MYO5B	Q9ULV0	1848 aa		12.9	□□□□□ -0.34
SAMMSON-223	ENST00000641923	ZFYVE9	O95405	1425 aa		12.9	□□□□□ -0.34
SAMMSON-223	ENST00000641923	NEUROD1	Q13562	356 aa		12.9	□□□□□ -0.34
SAMMSON-223	ENST00000641923	ZNF326	Q5BKZ1	582 aa	Known RBP	12.9	□□□□□ -0.34
SAMMSON-223	ENST00000641923	MYOM2	P54296	1465 aa		12.9	□□□□□ -0.34
SAMMSON-223	ENST00000641923	PPL	O60437	1756 aa		12.89	□□□□□ -0.35
SAMMSON-223	ENST00000641923	IFT172	Q9UG01	1749 aa		12.89	□□□□□ -0.35
SAMMSON-223	ENST00000641923	VGF	O15240	615 aa	Predicted RBP	12.89	□□□□□ -0.35
SAMMSON-223	ENST00000641923	SIN3A	Q96ST3	1273 aa		12.89	□□□□□ -0.35
SAMMSON-223	ENST00000641923	EID1	Q9Y6B2	187 aa		12.89	□□□□□ -0.35
SAMMSON-223	ENST00000641923	TMEM2	Q9UHN6	1383 aa		12.89	□□□□□ -0.35
SAMMSON-223	ENST00000641923	ARHGAP23	Q9P227	1491 aa		12.88	□□□□□ -0.35
SAMMSON-223	ENST00000641923	NEXMIF	Q5QGS0	1516 aa		12.87	□□□□□ -0.35
SAMMSON-223	ENST00000641923	RGL3	Q3MIN7	710 aa		12.86	□□□□□ -0.35
SAMMSON-223	ENST00000641923	RIMS2	Q9UQ26	1411 aa		12.86	□□□□□ -0.35
SAMMSON-223	ENST00000641923	POLR1A	O95602	1720 aa	Predicted RBP	12.85	□□□□□ -0.35
SAMMSON-223	ENST00000641923	LAMC1	P11047	1609 aa		12.85	□□□□□ -0.35
SAMMSON-223	ENST00000641923	ANKLE2	Q86XL3	938 aa		12.85	□□□□□ -0.35
SAMMSON-223	ENST00000641923	LMTK3	Q96Q04	1460 aa		12.85	□□□□□ -0.35
SAMMSON-223	ENST00000641923	SCAF11	Q99590	1463 aa	Known RBP	12.85	□□□□□ -0.35
SAMMSON-223	ENST00000641923	PPP1R15A	O75807	674 aa	Predicted RBP	12.84	□□□□□ -0.35
SAMMSON-223	ENST00000641923	DCAF11	Q8TEB1	546 aa		12.84	□□□□□ -0.35
SAMMSON-223	ENST00000641923	L3MBTL2	Q969R5	705 aa		12.84	□□□□□ -0.35
SAMMSON-223	ENST00000641923	KIAA1210	Q9ULL0	1709 aa		12.84	□□□□□ -0.35
SAMMSON-223	ENST00000641923	NRXN1	Q9ULB1	1477 aa		12.84	□□□□□ -0.35
SAMMSON-223	ENST00000641923	PLEKHG1	Q9ULL1	1385 aa		12.82	□□□□□ -0.36
SAMMSON-223	ENST00000641923	DIP2A	Q14689	1571 aa		12.81	□□□□□ -0.36
SAMMSON-223	ENST00000641923	MED14	O60244	1454 aa		12.81	□□□□□ -0.36
SAMMSON-223	ENST00000641923	TXNDC2	Q86VQ3	553 aa		12.81	□□□□□ -0.36
SAMMSON-223	ENST00000641923	SETBP1	Q9Y6X0	1596 aa		12.81	□□□□□ -0.36
SAMMSON-223	ENST00000641923	PIK3C2G	O75747	1445 aa		12.8	□□□□□ -0.36
SAMMSON-223	ENST00000641923	PRAG1	Q86YV5	1406 aa		12.8	□□□□□ -0.36
SAMMSON-223	ENST00000641923	IQGAP1	P46940	1657 aa		12.77	□□□□□ -0.36
SAMMSON-223	ENST00000641923	KDM2A	Q9Y2K7	1162 aa		12.77	□□□□□ -0.37
SAMMSON-223	ENST00000641923	PIK3R4	Q99570	1358 aa		12.77	□□□□□ -0.37
SAMMSON-223	ENST00000641923	NPHP4	O75161	1426 aa	Predicted RBP	12.77	□□□□□ -0.37
SAMMSON-223	ENST00000641923	RALGAPB	Q86X10	1494 aa		12.76	□□□□□ -0.37
SAMMSON-223	ENST00000641923	LTK	P29376	864 aa		12.75	□□□□□ -0.37
SAMMSON-223	ENST00000641923	TRPM1	Q7Z4N2	1603 aa		12.75	□□□□□ -0.37
SAMMSON-223	ENST00000641923	C14orf93	Q9H972	538 aa	Known RBP	12.75	□□□□□ -0.37
SAMMSON-223	ENST00000641923	TBX22	Q9Y458	520 aa		12.75	□□□□□ -0.37
SAMMSON-223	ENST00000641923	ALK	Q9UM73	1620 aa		12.74	□□□□□ -0.37
SAMMSON-223	ENST00000641923	ADGRF5	Q8IZF2	1346 aa		12.74	□□□□□ -0.37
SAMMSON-223	ENST00000641923	BCAN	Q96GW7	911 aa		12.74	□□□□□ -0.37
SAMMSON-223	ENST00000641923	NRXN3	Q9Y4C0	1643 aa		12.73	□□□□□ -0.37
SAMMSON-223	ENST00000641923	GPRASP1	Q5JY77	1395 aa		12.73	□□□□□ -0.37
SAMMSON-223	ENST00000641923	ROCK2	O75116	1388 aa	Known RBP	12.72	□□□□□ -0.37
SAMMSON-223	ENST00000641923	STRC	Q7RTU9	1775 aa		12.72	□□□□□ -0.37
SAMMSON-223	ENST00000641923	SETD1A	O15047	1707 aa	Known RBP	12.72	□□□□□ -0.37
SAMMSON-223	ENST00000641923	ADAMTS13	Q76LX8	1427 aa		12.71	□□□□□ -0.37
SAMMSON-223	ENST00000641923	EIF3A	Q14152	1382 aa	Known RBP	12.71	□□□□□ -0.37
SAMMSON-223	ENST00000641923	SLC24A1	O60721	1099 aa		12.71	□□□□□ -0.37
SAMMSON-223	ENST00000641923	HSPA2	P54652	639 aa		12.71	□□□□□ -0.37
SAMMSON-223	ENST00000641923	NUTM2D	Q5VT03	806 aa	Predicted RBP	12.7	□□□□□ -0.38
SAMMSON-223	ENST00000641923	NCKAP5L	Q9HCH0	1330 aa		12.69	□□□□□ -0.38
SAMMSON-223	ENST00000641923	KNDC1	Q76NI1	1749 aa		12.69	□□□□□ -0.38
SAMMSON-223	ENST00000641923	NBPF8	Q3BBV2	869 aa		12.69	□□□□□ -0.38
SAMMSON-223	ENST00000641923	ADGRB1	O14514	1584 aa		12.69	□□□□□ -0.38
SAMMSON-223	ENST00000641923	DLC1	Q96QB1	1528 aa		12.68	□□□□□ -0.38
SAMMSON-223	ENST00000641923	CFAP70	Q5T0N1	1121 aa		12.68	□□□□□ -0.38
SAMMSON-223	ENST00000641923	CARD11	Q9BXL7	1154 aa		12.68	□□□□□ -0.38
SAMMSON-223	ENST00000641923	LRPPRC	P42704	1394 aa	Known RBP	12.68	□□□□□ -0.38
SAMMSON-223	ENST00000641923	CHD2	O14647	1828 aa	Known RBP	12.67	□□□□□ -0.38
SAMMSON-223	ENST00000641923	SIRT1	Q96EB6	747 aa		12.67	□□□□□ -0.38
SAMMSON-223	ENST00000641923	TECPR2	O15040	1411 aa		12.67	□□□□□ -0.38
SAMMSON-223	ENST00000641923	ABCC11	Q96J66	1382 aa		12.67	□□□□□ -0.38
SAMMSON-223	ENST00000641923	NKTR	P30414	1462 aa	Known RBP	12.66	□□□□□ -0.38
SAMMSON-223	ENST00000641923	NWD1	Q149M9	1564 aa		12.66	□□□□□ -0.38
SAMMSON-223	ENST00000641923	PTCH1	Q13635	1447 aa		12.66	□□□□□ -0.38
SAMMSON-223	ENST00000641923	YTHDC2	Q9H6S0	1430 aa	Known RBP	12.66	□□□□□ -0.38
SAMMSON-223	ENST00000641923	FAM135B	Q49AJ0	1406 aa		12.65	□□□□□ -0.38
SAMMSON-223	ENST00000641923	KCNA6	P17658	529 aa		12.65	□□□□□ -0.38
SAMMSON-223	ENST00000641923	SLC26A8	Q96RN1	970 aa		12.65	□□□□□ -0.38
SAMMSON-223	ENST00000641923	CPS1	P31327	1500 aa		12.65	□□□□□ -0.38
SAMMSON-223	ENST00000641923	XRN1	Q8IZH2	1706 aa	Known RBP	12.65	□□□□□ -0.38
SAMMSON-223	ENST00000641923	ASXL1	Q8IXJ9	1541 aa		12.64	□□□□□ -0.39
SAMMSON-223	ENST00000641923	EIF4G2	P78344	907 aa	Known RBP eCLIP	12.63	□□□□□ -0.39
SAMMSON-223	ENST00000641923	MET	P08581	1390 aa		12.63	□□□□□ -0.39
SAMMSON-223	ENST00000641923	NCOA3	Q9Y6Q9	1424 aa		12.62	□□□□□ -0.39
SAMMSON-223	ENST00000641923	ARHGEF28	Q8N1W1	1705 aa	Known RBP	12.62	□□□□□ -0.39
SAMMSON-223	ENST00000641923	USP47	Q96K76	1375 aa		12.62	□□□□□ -0.39
SAMMSON-223	ENST00000641923	SBNO2	Q9Y2G9	1366 aa		12.62	□□□□□ -0.39
SAMMSON-223	ENST00000641923	NBPF1	Q3BBV0	1214 aa		12.62	□□□□□ -0.39

Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms