RNA–Protein interactions for RNA: ENST00000641023.1

PHGDH-208, Transcript of phosphoglycerate dehydrogenase, humanhuman

APPRIS P1 BASIC

Gene PHGDH, Length 2,096 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-208ENST00000641023 PIK3C2BO00750 1634 aa23.81■■□□□ 1.4
PHGDH-208ENST00000641023 SYNMO15061 1565 aa23.81■■□□□ 1.4
PHGDH-208ENST00000641023 SCAF11Q99590 1463 aaKnown RBP23.81■■□□□ 1.4
PHGDH-208ENST00000641023 NRXN1Q9ULB1 1477 aa23.8■■□□□ 1.4
PHGDH-208ENST00000641023 TMF1P82094 1093 aa23.8■■□□□ 1.4
PHGDH-208ENST00000641023 CFAP70Q5T0N1 1121 aa23.79■■□□□ 1.4
PHGDH-208ENST00000641023 IDI1Q13907 227 aa23.78■■□□□ 1.4
PHGDH-208ENST00000641023 EIF3AQ14152 1382 aaKnown RBP23.78■■□□□ 1.4
PHGDH-208ENST00000641023 IQGAP1P46940 1657 aa23.77■■□□□ 1.4
PHGDH-208ENST00000641023 PREX1Q8TCU6 1659 aa23.76■■□□□ 1.39
PHGDH-208ENST00000641023 PPLO60437 1756 aa23.75■■□□□ 1.39
PHGDH-208ENST00000641023 VGFO15240 615 aaPredicted RBP23.74■■□□□ 1.39
PHGDH-208ENST00000641023 MLECQ14165 292 aa23.74■■□□□ 1.39
PHGDH-208ENST00000641023 DISP3Q9P2K9 1392 aa23.73■■□□□ 1.39
PHGDH-208ENST00000641023 SLC24A1O60721 1099 aa23.72■■□□□ 1.39
PHGDH-208ENST00000641023 PIK3C2GO75747 1445 aa23.72■■□□□ 1.39
PHGDH-208ENST00000641023 SCAF1Q9H7N4 1312 aaKnown RBP23.72■■□□□ 1.39
PHGDH-208ENST00000641023 FBXO31Q5XUX0 539 aaPredicted RBP23.71■■□□□ 1.39
PHGDH-208ENST00000641023 ESF1Q9H501 851 aaKnown RBP23.71■■□□□ 1.39
PHGDH-208ENST00000641023 C14orf93Q9H972 538 aaKnown RBP23.71■■□□□ 1.39
PHGDH-208ENST00000641023 ERVK-7P63135 1459 aa23.7■■□□□ 1.39
PHGDH-208ENST00000641023 CDCA8Q53HL2 280 aa23.7■■□□□ 1.38
PHGDH-208ENST00000641023 CLTCQ00610 1675 aaKnown RBP23.69■■□□□ 1.38
PHGDH-208ENST00000641023 SETBP1Q9Y6X0 1596 aa23.68■■□□□ 1.38
PHGDH-208ENST00000641023 NEXMIFQ5QGS0 1516 aa23.67■■□□□ 1.38
PHGDH-208ENST00000641023 TRHP20396 242 aaPredicted RBP23.66■■□□□ 1.38
PHGDH-208ENST00000641023 GTF3C3Q9Y5Q9 886 aa23.65■■□□□ 1.38
PHGDH-208ENST00000641023 ZFYVE9O95405 1425 aa23.65■■□□□ 1.38
PHGDH-208ENST00000641023 MRS2Q9HD23 443 aa23.64■■□□□ 1.37
PHGDH-208ENST00000641023 STAG3Q9UJ98 1225 aa23.64■■□□□ 1.37
PHGDH-208ENST00000641023 TMEM131LA2VDJ0 1609 aa23.64■■□□□ 1.37
PHGDH-208ENST00000641023 KTN1Q86UP2 1357 aaKnown RBP23.63■■□□□ 1.37
PHGDH-208ENST00000641023 SPATA31D1Q6ZQQ2 1576 aa23.62■■□□□ 1.37
PHGDH-208ENST00000641023 NUTM2DQ5VT03 806 aaPredicted RBP23.62■■□□□ 1.37
PHGDH-208ENST00000641023 ZMYM3Q14202 1370 aa23.61■■□□□ 1.37
PHGDH-208ENST00000641023 CNGB1Q14028 1251 aaPredicted RBP23.61■■□□□ 1.37
PHGDH-208ENST00000641023 CCDC184Q52MB2 194 aa23.61■■□□□ 1.37
PHGDH-208ENST00000641023 RALBP1Q15311 655 aa23.6■■□□□ 1.37
PHGDH-208ENST00000641023 PER1O15534 1290 aaPredicted RBP23.59■■□□□ 1.37
PHGDH-208ENST00000641023 ADGRB1O14514 1584 aa23.59■■□□□ 1.37
PHGDH-208ENST00000641023 PANK3Q9H999 370 aa23.58■■□□□ 1.37
PHGDH-208ENST00000641023 SBNO2Q9Y2G9 1366 aa23.57■■□□□ 1.36
PHGDH-208ENST00000641023 CENPJQ9HC77 1338 aaPredicted RBP23.57■■□□□ 1.36
PHGDH-208ENST00000641023 TMEM132EQ6IEE7 984 aa23.56■■□□□ 1.36
PHGDH-208ENST00000641023 TRAK1Q9UPV9 953 aa23.56■■□□□ 1.36
PHGDH-208ENST00000641023 MYO5BQ9ULV0 1848 aa23.56■■□□□ 1.36
PHGDH-208ENST00000641023 MYO3AQ8NEV4 1616 aa23.55■■□□□ 1.36
PHGDH-208ENST00000641023 FAM9BQ8IZU0 186 aa23.53■■□□□ 1.36
PHGDH-208ENST00000641023 HNRNPUQ00839 825 aaKnown RBP eCLIP23.52■■□□□ 1.35
PHGDH-208ENST00000641023 MYBBP1AQ9BQG0 1328 aaKnown RBP23.51■■□□□ 1.35
PHGDH-208ENST00000641023 A2ML1A8K2U0 1454 aa23.51■■□□□ 1.35
PHGDH-208ENST00000641023 KDM5AP29375 1690 aaKnown RBP23.5■■□□□ 1.35
PHGDH-208ENST00000641023 PARD3Q8TEW0 1356 aa23.49■■□□□ 1.35
PHGDH-208ENST00000641023 TMC1Q8TDI8 760 aa23.48■■□□□ 1.35
PHGDH-208ENST00000641023 KNSTRNQ9Y448 316 aa23.48■■□□□ 1.35
PHGDH-208ENST00000641023 BRD4O60885 1362 aaPredicted RBP23.46■■□□□ 1.35
PHGDH-208ENST00000641023 TNRQ92752 1358 aa23.46■■□□□ 1.35
PHGDH-208ENST00000641023 RIMS2Q9UQ26 1411 aa23.44■■□□□ 1.34
PHGDH-208ENST00000641023 CC2D1BQ5T0F9 858 aaKnown RBP23.44■■□□□ 1.34
PHGDH-208ENST00000641023 DNAJC5Q9H3Z4 198 aa23.44■■□□□ 1.34
PHGDH-208ENST00000641023 NLRP13Q86W25 1043 aa23.44■■□□□ 1.34
PHGDH-208ENST00000641023 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.44■■□□□ 1.34
PHGDH-208ENST00000641023 HDGFP51858 240 aaKnown RBP23.43■■□□□ 1.34
PHGDH-208ENST00000641023 QRICH2Q9H0J4 1663 aa23.43■■□□□ 1.34
PHGDH-208ENST00000641023 MYOM1P52179 1685 aa23.41■■□□□ 1.34
PHGDH-208ENST00000641023 PNISRQ8TF01 805 aaKnown RBP23.4■■□□□ 1.34
PHGDH-208ENST00000641023 SENP3Q9H4L4 574 aaPredicted RBP23.4■■□□□ 1.34
PHGDH-208ENST00000641023 ARHGEF28Q8N1W1 1705 aaKnown RBP23.4■■□□□ 1.34
PHGDH-208ENST00000641023 ALKQ9UM73 1620 aa23.4■■□□□ 1.34
PHGDH-208ENST00000641023 PUS7Q96PZ0 661 aaKnown RBP23.39■■□□□ 1.34
PHGDH-208ENST00000641023 STK26Q9P289 416 aa23.39■■□□□ 1.34
PHGDH-208ENST00000641023 ASXL1Q8IXJ9 1541 aa23.39■■□□□ 1.33
PHGDH-208ENST00000641023 YTHDC2Q9H6S0 1430 aaKnown RBP23.38■■□□□ 1.33
PHGDH-208ENST00000641023 EVC2Q86UK5 1308 aa23.38■■□□□ 1.33
PHGDH-208ENST00000641023 AMER1Q5JTC6 1135 aaPredicted RBP23.37■■□□□ 1.33
PHGDH-208ENST00000641023 NPC1L1Q9UHC9 1359 aa23.35■■□□□ 1.33
PHGDH-208ENST00000641023 ZBED9Q6R2W3 1325 aa23.34■■□□□ 1.33
PHGDH-208ENST00000641023 NLRP1Q9C000 1473 aa23.33■■□□□ 1.33
PHGDH-208ENST00000641023 CEBPAP49715 358 aaPredicted RBP23.32■■□□□ 1.32
PHGDH-208ENST00000641023 POGKQ9P215 609 aa23.32■■□□□ 1.32
PHGDH-208ENST00000641023 PTPRMP28827 1452 aa23.32■■□□□ 1.32
PHGDH-208ENST00000641023 TMEM2Q9UHN6 1383 aa23.32■■□□□ 1.32
PHGDH-208ENST00000641023 SAFB2Q14151 953 aaKnown RBP eCLIP23.31■■□□□ 1.32
PHGDH-208ENST00000641023 PRAM1Q96QH2 718 aa23.31■■□□□ 1.32
PHGDH-208ENST00000641023 LRPPRCP42704 1394 aaKnown RBP23.3■■□□□ 1.32
PHGDH-208ENST00000641023 UBR1Q8IWV7 1749 aa23.29■■□□□ 1.32
PHGDH-208ENST00000641023 FER1L4A9Z1Z3 1794 aa23.29■■□□□ 1.32
PHGDH-208ENST00000641023 TULP4Q9NRJ4 1543 aa23.28■■□□□ 1.32
PHGDH-208ENST00000641023 CARD14Q9BXL6 1004 aa23.28■■□□□ 1.32
PHGDH-208ENST00000641023 SLC12A5Q9H2X9 1139 aa23.28■■□□□ 1.32
PHGDH-208ENST00000641023 C3P01024 1663 aa23.27■■□□□ 1.32
PHGDH-208ENST00000641023 ABCC11Q96J66 1382 aa23.25■■□□□ 1.31
PHGDH-208ENST00000641023 DLC1Q96QB1 1528 aa23.25■■□□□ 1.31
PHGDH-208ENST00000641023 PPP2R1AP30153 589 aa23.25■■□□□ 1.31
PHGDH-208ENST00000641023 BCANQ96GW7 911 aa23.25■■□□□ 1.31
PHGDH-208ENST00000641023 SRPK2P78362 688 aaKnown RBP23.24■■□□□ 1.31
PHGDH-208ENST00000641023 CABP2Q9NPB3 220 aa23.24■■□□□ 1.31
PHGDH-208ENST00000641023 SETD1AO15047 1707 aaKnown RBP23.24■■□□□ 1.31
PHGDH-208ENST00000641023 MINK1Q8N4C8 1332 aaPredicted RBP23.24■■□□□ 1.31
PHGDH-208ENST00000641023 NRXN3Q9Y4C0 1643 aa23.23■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms