RNA–Protein interactions for RNA: ENST00000640958.1

SP3-208, Transcript of Sp3 transcription factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SP3, Length 2,142 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP3-208ENST00000640958 FAM69CQ0P6D2 419 aa27.92■■■□□ 2.06
SP3-208ENST00000640958 WASHC2CQ9Y4E1 1318 aa27.92■■■□□ 2.06
SP3-208ENST00000640958 TMF1P82094 1093 aa27.91■■■□□ 2.06
SP3-208ENST00000640958 NOS1P29475 1434 aa27.91■■■□□ 2.06
SP3-208ENST00000640958 PIK3C2BO00750 1634 aa27.91■■■□□ 2.06
SP3-208ENST00000640958 CNGB1Q14028 1251 aaPredicted RBP27.89■■■□□ 2.05
SP3-208ENST00000640958 ADGRF5Q8IZF2 1346 aa27.89■■■□□ 2.05
SP3-208ENST00000640958 SYNMO15061 1565 aa27.88■■■□□ 2.05
SP3-208ENST00000640958 ARHGAP31Q2M1Z3 1444 aa27.87■■■□□ 2.05
SP3-208ENST00000640958 RALBP1Q15311 655 aa27.85■■■□□ 2.05
SP3-208ENST00000640958 PER1O15534 1290 aaPredicted RBP27.85■■■□□ 2.05
SP3-208ENST00000640958 EIF3AQ14152 1382 aaKnown RBP27.84■■■□□ 2.05
SP3-208ENST00000640958 PARD3Q8TEW0 1356 aa27.83■■■□□ 2.05
SP3-208ENST00000640958 MYBBP1AQ9BQG0 1328 aaKnown RBP27.83■■■□□ 2.05
SP3-208ENST00000640958 CFAP70Q5T0N1 1121 aa27.82■■■□□ 2.04
SP3-208ENST00000640958 ZBED9Q6R2W3 1325 aa27.82■■■□□ 2.04
SP3-208ENST00000640958 SETBP1Q9Y6X0 1596 aa27.82■■■□□ 2.04
SP3-208ENST00000640958 MYO3AQ8NEV4 1616 aa27.81■■■□□ 2.04
SP3-208ENST00000640958 REREQ9P2R6 1566 aa27.81■■■□□ 2.04
SP3-208ENST00000640958 BRD4O60885 1362 aaPredicted RBP27.81■■■□□ 2.04
SP3-208ENST00000640958 KIF13AQ9H1H9 1805 aa27.8■■■□□ 2.04
SP3-208ENST00000640958 MYOM1P52179 1685 aa27.79■■■□□ 2.04
SP3-208ENST00000640958 PIK3C2GO75747 1445 aa27.79■■■□□ 2.04
SP3-208ENST00000640958 CHGAP10645 457 aaKnown RBP27.77■■■□□ 2.04
SP3-208ENST00000640958 PREX1Q8TCU6 1659 aa27.77■■■□□ 2.04
SP3-208ENST00000640958 PNISRQ8TF01 805 aaKnown RBP27.76■■■□□ 2.03
SP3-208ENST00000640958 PANK3Q9H999 370 aa27.76■■■□□ 2.03
SP3-208ENST00000640958 KDM5AP29375 1690 aaKnown RBP27.76■■■□□ 2.03
SP3-208ENST00000640958 RPGRIP1LQ68CZ1 1315 aa27.75■■■□□ 2.03
SP3-208ENST00000640958 FKBP8Q14318 412 aa27.74■■■□□ 2.03
SP3-208ENST00000640958 TMC1Q8TDI8 760 aa27.74■■■□□ 2.03
SP3-208ENST00000640958 NEXMIFQ5QGS0 1516 aa27.74■■■□□ 2.03
SP3-208ENST00000640958 CDCA8Q53HL2 280 aa27.73■■■□□ 2.03
SP3-208ENST00000640958 AGLP35573 1532 aa27.73■■■□□ 2.03
SP3-208ENST00000640958 ADGRB1O14514 1584 aa27.72■■■□□ 2.03
SP3-208ENST00000640958 LRPPRCP42704 1394 aaKnown RBP27.72■■■□□ 2.03
SP3-208ENST00000640958 NEFLP07196 543 aa27.71■■■□□ 2.03
SP3-208ENST00000640958 ERVK-7P63135 1459 aa27.7■■■□□ 2.02
SP3-208ENST00000640958 MYO5BQ9ULV0 1848 aa27.69■■■□□ 2.02
SP3-208ENST00000640958 NLRP13Q86W25 1043 aa27.69■■■□□ 2.02
SP3-208ENST00000640958 SBNO2Q9Y2G9 1366 aa27.67■■■□□ 2.02
SP3-208ENST00000640958 C14orf93Q9H972 538 aaKnown RBP27.67■■■□□ 2.02
SP3-208ENST00000640958 TMEM131LA2VDJ0 1609 aa27.65■■■□□ 2.02
SP3-208ENST00000640958 SLC24A1O60721 1099 aa27.64■■■□□ 2.01
SP3-208ENST00000640958 CC2D1BQ5T0F9 858 aaKnown RBP27.64■■■□□ 2.01
SP3-208ENST00000640958 ARHGEF40Q8TER5 1519 aa27.64■■■□□ 2.01
SP3-208ENST00000640958 QRICH2Q9H0J4 1663 aa27.63■■■□□ 2.01
SP3-208ENST00000640958 IDI1Q13907 227 aa27.62■■■□□ 2.01
SP3-208ENST00000640958 SLC52A1Q9NWF4 448 aa27.62■■■□□ 2.01
SP3-208ENST00000640958 CLTCQ00610 1675 aaKnown RBP27.6■■■□□ 2.01
SP3-208ENST00000640958 ZFYVE9O95405 1425 aa27.59■■■□□ 2.01
SP3-208ENST00000640958 ASXL1Q8IXJ9 1541 aa27.59■■■□□ 2.01
SP3-208ENST00000640958 BCANQ96GW7 911 aa27.58■■■□□ 2.01
SP3-208ENST00000640958 CENPJQ9HC77 1338 aaPredicted RBP27.58■■■□□ 2.01
SP3-208ENST00000640958 ARHGEF28Q8N1W1 1705 aaKnown RBP27.57■■■□□ 2
SP3-208ENST00000640958 VGFO15240 615 aaPredicted RBP27.56■■■□□ 2
SP3-208ENST00000640958 AMER1Q5JTC6 1135 aaPredicted RBP27.56■■■□□ 2
SP3-208ENST00000640958 PPP6R1Q9UPN7 881 aa27.56■■■□□ 2
SP3-208ENST00000640958 KNSTRNQ9Y448 316 aa27.56■■■□□ 2
SP3-208ENST00000640958 SMG6Q86US8 1419 aaKnown RBP27.56■■■□□ 2
SP3-208ENST00000640958 NPC1L1Q9UHC9 1359 aa27.54■■■□□ 2
SP3-208ENST00000640958 TRAK1Q9UPV9 953 aa27.53■■■□□ 2
SP3-208ENST00000640958 TMEM132EQ6IEE7 984 aa27.52■■■□□ 2
SP3-208ENST00000640958 SPATA31D1Q6ZQQ2 1576 aa27.51■■□□□ 1.99
SP3-208ENST00000640958 NUTM2DQ5VT03 806 aaPredicted RBP27.51■■□□□ 1.99
SP3-208ENST00000640958 FBXO31Q5XUX0 539 aaPredicted RBP27.51■■□□□ 1.99
SP3-208ENST00000640958 INSRP06213 1382 aa27.5■■□□□ 1.99
SP3-208ENST00000640958 PELP1Q8IZL8 1130 aaKnown RBP27.47■■□□□ 1.99
SP3-208ENST00000640958 BLMP54132 1417 aaPredicted RBP27.46■■□□□ 1.99
SP3-208ENST00000640958 NUDCQ9Y266 331 aa27.46■■□□□ 1.99
SP3-208ENST00000640958 PPP2R1AP30153 589 aa27.44■■□□□ 1.98
SP3-208ENST00000640958 TULP4Q9NRJ4 1543 aa27.42■■□□□ 1.98
SP3-208ENST00000640958 SENP3-EIF4A1A0A087X0R7 540 aa27.41■■□□□ 1.98
SP3-208ENST00000640958 IRX6P78412 446 aaPredicted RBP27.41■■□□□ 1.98
SP3-208ENST00000640958 CARD14Q9BXL6 1004 aa27.4■■□□□ 1.98
SP3-208ENST00000640958 A2ML1A8K2U0 1454 aa27.38■■□□□ 1.97
SP3-208ENST00000640958 ERICH6BQ5W0A0 696 aa27.38■■□□□ 1.97
SP3-208ENST00000640958 MLECQ14165 292 aa27.37■■□□□ 1.97
SP3-208ENST00000640958 ALKQ9UM73 1620 aa27.36■■□□□ 1.97
SP3-208ENST00000640958 USP32Q8NFA0 1604 aa27.36■■□□□ 1.97
SP3-208ENST00000640958 PTPRMP28827 1452 aa27.35■■□□□ 1.97
SP3-208ENST00000640958 PUS7Q96PZ0 661 aaKnown RBP27.34■■□□□ 1.97
SP3-208ENST00000640958 RNF123Q5XPI4 1314 aa27.32■■□□□ 1.96
SP3-208ENST00000640958 NSD3Q9BZ95 1437 aa27.31■■□□□ 1.96
SP3-208ENST00000640958 SETD1AO15047 1707 aaKnown RBP27.31■■□□□ 1.96
SP3-208ENST00000640958 YTHDC2Q9H6S0 1430 aaKnown RBP27.31■■□□□ 1.96
SP3-208ENST00000640958 EVC2Q86UK5 1308 aa27.31■■□□□ 1.96
SP3-208ENST00000640958 STAG3Q9UJ98 1225 aa27.3■■□□□ 1.96
SP3-208ENST00000640958 SLC12A5Q9H2X9 1139 aa27.29■■□□□ 1.96
SP3-208ENST00000640958 RIMS2Q9UQ26 1411 aa27.28■■□□□ 1.96
SP3-208ENST00000640958 ZMYM3Q14202 1370 aa27.27■■□□□ 1.96
SP3-208ENST00000640958 PDE3BQ13370 1112 aa27.27■■□□□ 1.96
SP3-208ENST00000640958 ADAMTS8Q9UP79 889 aa27.26■■□□□ 1.96
SP3-208ENST00000640958 SENP3Q9H4L4 574 aaPredicted RBP27.26■■□□□ 1.95
SP3-208ENST00000640958 STK26Q9P289 416 aa27.26■■□□□ 1.95
SP3-208ENST00000640958 WDR43Q15061 677 aaKnown RBP eCLIP27.23■■□□□ 1.95
SP3-208ENST00000640958 SALL2Q9Y467 1007 aaPredicted RBP27.23■■□□□ 1.95
SP3-208ENST00000640958 NRXN3Q9Y4C0 1643 aa27.23■■□□□ 1.95
SP3-208ENST00000640958 PPP4R2Q9NY27 417 aa27.23■■□□□ 1.95
SP3-208ENST00000640958 ANKRD36BQ8N2N9 1353 aa27.22■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms