RNA–Protein interactions for RNA: ENST00000640957.1

SCARB2-227, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-227ENST00000640957 SLFN5Q08AF3 891 aa17.54■□□□□ 0.4
SCARB2-227ENST00000640957 PLEKHG5O94827 1062 aa17.54■□□□□ 0.4
SCARB2-227ENST00000640957 KIAA0556O60303 1618 aa17.53■□□□□ 0.4
SCARB2-227ENST00000640957 TRIM44Q96DX7 344 aaPredicted RBP17.53■□□□□ 0.4
SCARB2-227ENST00000640957 PCDHB15Q9Y5E8 787 aa17.53■□□□□ 0.4
SCARB2-227ENST00000640957 EIF4G3O43432 1585 aaKnown RBP17.52■□□□□ 0.4
SCARB2-227ENST00000640957 PDZRN3Q9UPQ7 1066 aa17.52■□□□□ 0.4
SCARB2-227ENST00000640957 CLCN1P35523 988 aa17.52■□□□□ 0.39
SCARB2-227ENST00000640957 CCDC144AA2RUR9 1427 aa17.51■□□□□ 0.39
SCARB2-227ENST00000640957 KIF14Q15058 1648 aa17.51■□□□□ 0.39
SCARB2-227ENST00000640957 ESPNB1AK53 854 aa17.51■□□□□ 0.39
SCARB2-227ENST00000640957 RLBP1P12271 317 aa17.51■□□□□ 0.39
SCARB2-227ENST00000640957 SYNJ2O15056 1496 aa17.51■□□□□ 0.39
SCARB2-227ENST00000640957 RAPGEF6Q8TEU7 1601 aa17.51■□□□□ 0.39
SCARB2-227ENST00000640957 NUTM2DQ5VT03 806 aaPredicted RBP17.5■□□□□ 0.39
SCARB2-227ENST00000640957 A0A0U1RQG5 324 aaPredicted RBP17.5■□□□□ 0.39
SCARB2-227ENST00000640957 GAS2L3Q86XJ1 694 aa17.5■□□□□ 0.39
SCARB2-227ENST00000640957 TESK2Q96S53 571 aa17.5■□□□□ 0.39
SCARB2-227ENST00000640957 MBD5Q9P267 1494 aa17.49■□□□□ 0.39
SCARB2-227ENST00000640957 GRPEL1Q9HAV7 217 aa17.49■□□□□ 0.39
SCARB2-227ENST00000640957 TMF1P82094 1093 aa17.49■□□□□ 0.39
SCARB2-227ENST00000640957 ATP10BO94823 1461 aa17.49■□□□□ 0.39
SCARB2-227ENST00000640957 MAGI1Q96QZ7 1491 aaPredicted RBP17.46■□□□□ 0.39
SCARB2-227ENST00000640957 RRP9O43818 475 aaKnown RBP17.46■□□□□ 0.39
SCARB2-227ENST00000640957 TBC1D32Q96NH3 1257 aa17.46■□□□□ 0.39
SCARB2-227ENST00000640957 RALGAPBQ86X10 1494 aa17.46■□□□□ 0.38
SCARB2-227ENST00000640957 CENPJQ9HC77 1338 aaPredicted RBP17.45■□□□□ 0.38
SCARB2-227ENST00000640957 KIF3BO15066 747 aa17.45■□□□□ 0.38
SCARB2-227ENST00000640957 POLR1AO95602 1720 aaPredicted RBP17.45■□□□□ 0.38
SCARB2-227ENST00000640957 FSD2A1L4K1 749 aa17.45■□□□□ 0.38
SCARB2-227ENST00000640957 FAM13BQ9NYF5 915 aa17.45■□□□□ 0.38
SCARB2-227ENST00000640957 CEP170Q5SW79 1584 aa17.44■□□□□ 0.38
SCARB2-227ENST00000640957 BLMP54132 1417 aaPredicted RBP17.44■□□□□ 0.38
SCARB2-227ENST00000640957 C22orf23Q9BZE7 217 aa17.43■□□□□ 0.38
SCARB2-227ENST00000640957 DNMT1P26358 1616 aaKnown RBP17.43■□□□□ 0.38
SCARB2-227ENST00000640957 KIAA1211Q6ZU35 1233 aa17.43■□□□□ 0.38
SCARB2-227ENST00000640957 SAFB2Q14151 953 aaKnown RBP eCLIP17.42■□□□□ 0.38
SCARB2-227ENST00000640957 NCLP19338 710 aaKnown RBP17.42■□□□□ 0.38
SCARB2-227ENST00000640957 MRE11P49959 708 aa17.41■□□□□ 0.38
SCARB2-227ENST00000640957 EFCAB2Q5VUJ9 269 aa17.41■□□□□ 0.38
SCARB2-227ENST00000640957 GGT6Q6P531 493 aa17.41■□□□□ 0.38
SCARB2-227ENST00000640957 ZNF521Q96K83 1311 aa17.4■□□□□ 0.38
SCARB2-227ENST00000640957 MAPK8IP3Q9UPT6 1336 aa17.4■□□□□ 0.38
SCARB2-227ENST00000640957 ZMYM4Q5VZL5 1548 aa17.4■□□□□ 0.38
SCARB2-227ENST00000640957 CHMP5Q9NZZ3 219 aa17.4■□□□□ 0.38
SCARB2-227ENST00000640957 ARHGAP5Q13017 1502 aa17.39■□□□□ 0.37
SCARB2-227ENST00000640957 PRDM10Q9NQV6 1147 aa17.39■□□□□ 0.37
SCARB2-227ENST00000640957 SPAG9O60271 1321 aaKnown RBP17.39■□□□□ 0.37
SCARB2-227ENST00000640957 MPNDQ8N594 471 aa17.38■□□□□ 0.37
SCARB2-227ENST00000640957 PODXL2Q9NZ53 605 aa17.38■□□□□ 0.37
SCARB2-227ENST00000640957 AMER1Q5JTC6 1135 aaPredicted RBP17.38■□□□□ 0.37
SCARB2-227ENST00000640957 CGNL1Q0VF96 1302 aa17.37■□□□□ 0.37
SCARB2-227ENST00000640957 TPRNQ4KMQ1 711 aa17.37■□□□□ 0.37
SCARB2-227ENST00000640957 HSCBQ8IWL3 235 aa17.37■□□□□ 0.37
SCARB2-227ENST00000640957 E9PSI1 815 aa17.36■□□□□ 0.37
SCARB2-227ENST00000640957 R3HCC1Q9Y3T6 440 aaKnown RBP17.36■□□□□ 0.37
SCARB2-227ENST00000640957 ERBINQ96RT1 1412 aa17.36■□□□□ 0.37
SCARB2-227ENST00000640957 TNPO1Q92973 898 aaKnown RBP17.36■□□□□ 0.37
SCARB2-227ENST00000640957 RBM42Q9BTD8 480 aaKnown RBP17.36■□□□□ 0.37
SCARB2-227ENST00000640957 HSP90AB1P08238 724 aaKnown RBP17.35■□□□□ 0.37
SCARB2-227ENST00000640957 PLEKHH2Q8IVE3 1493 aa17.35■□□□□ 0.37
SCARB2-227ENST00000640957 WWC1Q8IX03 1113 aa17.34■□□□□ 0.37
SCARB2-227ENST00000640957 UHRF1BP1Q6BDS2 1440 aa17.34■□□□□ 0.37
SCARB2-227ENST00000640957 EIF3AQ14152 1382 aaKnown RBP17.34■□□□□ 0.37
SCARB2-227ENST00000640957 RSPH4AQ5TD94 716 aa17.33■□□□□ 0.37
SCARB2-227ENST00000640957 FTSJ3Q8IY81 847 aaKnown RBP17.33■□□□□ 0.36
SCARB2-227ENST00000640957 TSR2Q969E8 191 aaKnown RBP17.33■□□□□ 0.36
SCARB2-227ENST00000640957 CHAMP1Q96JM3 812 aa17.32■□□□□ 0.36
SCARB2-227ENST00000640957 NKTRP30414 1462 aaKnown RBP17.32■□□□□ 0.36
SCARB2-227ENST00000640957 MAGI2Q86UL8 1455 aa17.32■□□□□ 0.36
SCARB2-227ENST00000640957 RARSP54136 660 aaKnown RBP17.32■□□□□ 0.36
SCARB2-227ENST00000640957 LNPKQ9C0E8 428 aa17.32■□□□□ 0.36
SCARB2-227ENST00000640957 CD2BP2O95400 341 aaKnown RBP17.31■□□□□ 0.36
SCARB2-227ENST00000640957 FOXD4L5Q5VV16 416 aaPredicted RBP17.31■□□□□ 0.36
SCARB2-227ENST00000640957 FOXD4L4Q8WXT5 416 aaPredicted RBP17.31■□□□□ 0.36
SCARB2-227ENST00000640957 NLRP1Q9C000 1473 aa17.31■□□□□ 0.36
SCARB2-227ENST00000640957 XPCQ01831 940 aaPredicted RBP17.31■□□□□ 0.36
SCARB2-227ENST00000640957 CFAP70Q5T0N1 1121 aa17.31■□□□□ 0.36
SCARB2-227ENST00000640957 PDE3AQ14432 1141 aa17.3■□□□□ 0.36
SCARB2-227ENST00000640957 ITPRIPQ8IWB1 547 aa17.3■□□□□ 0.36
SCARB2-227ENST00000640957 PMFBP1Q8TBY8 1022 aa17.3■□□□□ 0.36
SCARB2-227ENST00000640957 JARID2Q92833 1246 aaPredicted RBP17.3■□□□□ 0.36
SCARB2-227ENST00000640957 PRAG1Q86YV5 1406 aa17.3■□□□□ 0.36
SCARB2-227ENST00000640957 NPM1P06748 294 aaKnown RBP eCLIP17.3■□□□□ 0.36
SCARB2-227ENST00000640957 RWDD1Q9H446 243 aaPredicted RBP17.3■□□□□ 0.36
SCARB2-227ENST00000640957 TRMT2AQ8IZ69 625 aaKnown RBP17.29■□□□□ 0.36
SCARB2-227ENST00000640957 ZHX1Q9UKY1 873 aaPredicted RBP17.29■□□□□ 0.36
SCARB2-227ENST00000640957 TRAK1Q9UPV9 953 aa17.29■□□□□ 0.36
SCARB2-227ENST00000640957 SSFA2P28290 1259 aa17.29■□□□□ 0.36
SCARB2-227ENST00000640957 PLPPR3Q6T4P5 718 aa17.28■□□□□ 0.36
SCARB2-227ENST00000640957 TCP11L2Q8N4U5 519 aa17.28■□□□□ 0.36
SCARB2-227ENST00000640957 NUP160Q12769 1436 aa17.28■□□□□ 0.36
SCARB2-227ENST00000640957 NASPP49321 788 aaPredicted RBP17.27■□□□□ 0.36
SCARB2-227ENST00000640957 SYCP2Q9BX26 1530 aa17.27■□□□□ 0.35
SCARB2-227ENST00000640957 MSNP26038 577 aaKnown RBP17.27■□□□□ 0.35
SCARB2-227ENST00000640957 TMEM132EQ6IEE7 984 aa17.27■□□□□ 0.35
SCARB2-227ENST00000640957 DDX49Q9Y6V7 483 aaKnown RBP17.27■□□□□ 0.35
SCARB2-227ENST00000640957 CCDC141Q6ZP82 1450 aa17.26■□□□□ 0.35
SCARB2-227ENST00000640957 DDX11L8A8MPP1 907 aa17.26■□□□□ 0.35
SCARB2-227ENST00000640957 STK26Q9P289 416 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 138.8 ms