RNA–Protein interactions for RNA: ENST00000640946.1

PRICKLE1-221, Transcript of prickle planar cell polarity protein 1, humanhuman

TSL 2

Gene PRICKLE1, Length 320 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE1-221ENST00000640946 NUP155O75694 1391 aa11.91□□□□□ -0.5
PRICKLE1-221ENST00000640946 RPRD2Q5VT52 1461 aaKnown RBP11.89□□□□□ -0.51
PRICKLE1-221ENST00000640946 TXNDC2Q86VQ3 553 aa11.89□□□□□ -0.51
PRICKLE1-221ENST00000640946 TET3O43151 1660 aa11.89□□□□□ -0.51
PRICKLE1-221ENST00000640946 EFCAB6Q5THR3 1501 aa11.88□□□□□ -0.51
PRICKLE1-221ENST00000640946 TMEM94Q12767 1356 aa11.88□□□□□ -0.51
PRICKLE1-221ENST00000640946 RAB3GAP2Q9H2M9 1393 aa11.88□□□□□ -0.51
PRICKLE1-221ENST00000640946 NOS1P29475 1434 aa11.86□□□□□ -0.51
PRICKLE1-221ENST00000640946 RBM33Q96EV2 1170 aaKnown RBP11.86□□□□□ -0.51
PRICKLE1-221ENST00000640946 TMEM2Q9UHN6 1383 aa11.86□□□□□ -0.51
PRICKLE1-221ENST00000640946 NWD1Q149M9 1564 aa11.86□□□□□ -0.51
PRICKLE1-221ENST00000640946 KDM5AP29375 1690 aaKnown RBP11.86□□□□□ -0.51
PRICKLE1-221ENST00000640946 E9PCH4 1651 aa11.84□□□□□ -0.51
PRICKLE1-221ENST00000640946 PHLPP1O60346 1717 aa11.83□□□□□ -0.52
PRICKLE1-221ENST00000640946 COL16A1Q07092 1604 aaPredicted RBP11.82□□□□□ -0.52
PRICKLE1-221ENST00000640946 KCNA6P17658 529 aa11.82□□□□□ -0.52
PRICKLE1-221ENST00000640946 TRIM52Q96A61 297 aa11.82□□□□□ -0.52
PRICKLE1-221ENST00000640946 MPHOSPH9Q99550 1183 aa11.82□□□□□ -0.52
PRICKLE1-221ENST00000640946 LRP6O75581 1613 aa11.82□□□□□ -0.52
PRICKLE1-221ENST00000640946 SLC26A8Q96RN1 970 aa11.81□□□□□ -0.52
PRICKLE1-221ENST00000640946 SLC4A1APQ9BWU0 796 aaKnown RBP11.81□□□□□ -0.52
PRICKLE1-221ENST00000640946 SLC52A1Q9NWF4 448 aa11.81□□□□□ -0.52
PRICKLE1-221ENST00000640946 NKTRP30414 1462 aaKnown RBP11.81□□□□□ -0.52
PRICKLE1-221ENST00000640946 IDI1Q13907 227 aa11.8□□□□□ -0.52
PRICKLE1-221ENST00000640946 EID1Q9Y6B2 187 aa11.8□□□□□ -0.52
PRICKLE1-221ENST00000640946 ADGRB3O60242 1522 aa11.79□□□□□ -0.52
PRICKLE1-221ENST00000640946 PROSER2Q86WR7 435 aaPredicted RBP11.78□□□□□ -0.52
PRICKLE1-221ENST00000640946 CHD2O14647 1828 aaKnown RBP11.78□□□□□ -0.52
PRICKLE1-221ENST00000640946 JCADQ9P266 1359 aa11.77□□□□□ -0.53
PRICKLE1-221ENST00000640946 ZFYVE9O95405 1425 aa11.77□□□□□ -0.53
PRICKLE1-221ENST00000640946 MYO5BQ9ULV0 1848 aa11.76□□□□□ -0.53
PRICKLE1-221ENST00000640946 UPF1Q92900 1129 aaKnown RBP eCLIP11.76□□□□□ -0.53
PRICKLE1-221ENST00000640946 SLAIN2Q9P270 581 aa11.76□□□□□ -0.53
PRICKLE1-221ENST00000640946 SPHKAPQ2M3C7 1700 aa11.76□□□□□ -0.53
PRICKLE1-221ENST00000640946 TRPM2O94759 1503 aa11.76□□□□□ -0.53
PRICKLE1-221ENST00000640946 MSH6P52701 1360 aa11.75□□□□□ -0.53
PRICKLE1-221ENST00000640946 DIP2AQ14689 1571 aa11.74□□□□□ -0.53
PRICKLE1-221ENST00000640946 SHPRHQ149N8 1683 aa11.74□□□□□ -0.53
PRICKLE1-221ENST00000640946 AHDC1Q5TGY3 1603 aaPredicted RBP11.73□□□□□ -0.53
PRICKLE1-221ENST00000640946 ANKRD30BQ9BXX2 1392 aa11.73□□□□□ -0.53
PRICKLE1-221ENST00000640946 SRCAPQ6ZRS2 3230 aa11.73□□□□□ -0.53
PRICKLE1-221ENST00000640946 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.72□□□□□ -0.53
PRICKLE1-221ENST00000640946 TMEM131LA2VDJ0 1609 aa11.72□□□□□ -0.53
PRICKLE1-221ENST00000640946 FOXD1Q16676 465 aa11.72□□□□□ -0.53
PRICKLE1-221ENST00000640946 STAG3Q9UJ98 1225 aa11.72□□□□□ -0.53
PRICKLE1-221ENST00000640946 PLEKHG1Q9ULL1 1385 aa11.71□□□□□ -0.53
PRICKLE1-221ENST00000640946 PCGF6Q9BYE7 350 aa11.71□□□□□ -0.53
PRICKLE1-221ENST00000640946 SPATA31A6Q5VVP1 1343 aa11.7□□□□□ -0.54
PRICKLE1-221ENST00000640946 CLTCL1P53675 1640 aa11.7□□□□□ -0.54
PRICKLE1-221ENST00000640946 ADAMTS13Q76LX8 1427 aa11.69□□□□□ -0.54
PRICKLE1-221ENST00000640946 CCDC144AA2RUR9 1427 aa11.69□□□□□ -0.54
PRICKLE1-221ENST00000640946 RIMS2Q9UQ26 1411 aa11.69□□□□□ -0.54
PRICKLE1-221ENST00000640946 NCOA3Q9Y6Q9 1424 aa11.69□□□□□ -0.54
PRICKLE1-221ENST00000640946 DHX57Q6P158 1386 aaKnown RBP11.68□□□□□ -0.54
PRICKLE1-221ENST00000640946 SPATA31E1Q6ZUB1 1445 aa11.68□□□□□ -0.54
PRICKLE1-221ENST00000640946 ZNF772Q68DY9 489 aaPredicted RBP11.67□□□□□ -0.54
PRICKLE1-221ENST00000640946 CDK12Q9NYV4 1490 aaPredicted RBP11.67□□□□□ -0.54
PRICKLE1-221ENST00000640946 KIF1BO60333 1816 aa11.66□□□□□ -0.54
PRICKLE1-221ENST00000640946 HDGFP51858 240 aaKnown RBP11.66□□□□□ -0.54
PRICKLE1-221ENST00000640946 TBX22Q9Y458 520 aa11.66□□□□□ -0.54
PRICKLE1-221ENST00000640946 PTPRUQ92729 1446 aa11.66□□□□□ -0.54
PRICKLE1-221ENST00000640946 RPGRIP1LQ68CZ1 1315 aa11.65□□□□□ -0.54
PRICKLE1-221ENST00000640946 NHSL1Q5SYE7 1610 aa11.64□□□□□ -0.55
PRICKLE1-221ENST00000640946 BRINP3Q76B58 766 aa11.64□□□□□ -0.55
PRICKLE1-221ENST00000640946 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.64□□□□□ -0.55
PRICKLE1-221ENST00000640946 BCANQ96GW7 911 aa11.64□□□□□ -0.55
PRICKLE1-221ENST00000640946 RGS12O14924 1447 aa11.63□□□□□ -0.55
PRICKLE1-221ENST00000640946 RXRBP28702 533 aa11.63□□□□□ -0.55
PRICKLE1-221ENST00000640946 MEX3CQ5U5Q3 659 aaKnown RBP11.63□□□□□ -0.55
PRICKLE1-221ENST00000640946 C19orf44Q9H6X5 657 aa11.63□□□□□ -0.55
PRICKLE1-221ENST00000640946 ASXL1Q8IXJ9 1541 aa11.63□□□□□ -0.55
PRICKLE1-221ENST00000640946 NRXN3Q9Y4C0 1643 aa11.63□□□□□ -0.55
PRICKLE1-221ENST00000640946 CHGAP10645 457 aaKnown RBP11.62□□□□□ -0.55
PRICKLE1-221ENST00000640946 NUTM2DQ5VT03 806 aaPredicted RBP11.62□□□□□ -0.55
PRICKLE1-221ENST00000640946 CADPS2Q86UW7 1296 aa11.62□□□□□ -0.55
PRICKLE1-221ENST00000640946 XRN1Q8IZH2 1706 aaKnown RBP11.62□□□□□ -0.55
PRICKLE1-221ENST00000640946 AFF2P51816 1311 aa11.61□□□□□ -0.55
PRICKLE1-221ENST00000640946 NEXMIFQ5QGS0 1516 aa11.61□□□□□ -0.55
PRICKLE1-221ENST00000640946 NUTM2BA6NNL0 878 aaPredicted RBP11.61□□□□□ -0.55
PRICKLE1-221ENST00000640946 NUTM2EB1AL46 878 aaPredicted RBP11.61□□□□□ -0.55
PRICKLE1-221ENST00000640946 NUTM2AQ8IVF1 878 aaPredicted RBP11.61□□□□□ -0.55
PRICKLE1-221ENST00000640946 STAC3Q96MF2 364 aa11.61□□□□□ -0.55
PRICKLE1-221ENST00000640946 PIK3R4Q99570 1358 aa11.61□□□□□ -0.55
PRICKLE1-221ENST00000640946 MST1RQ04912 1400 aa11.6□□□□□ -0.55
PRICKLE1-221ENST00000640946 VGFO15240 615 aaPredicted RBP11.6□□□□□ -0.55
PRICKLE1-221ENST00000640946 CLSPNQ9HAW4 1339 aa11.6□□□□□ -0.55
PRICKLE1-221ENST00000640946 PPP1R15AO75807 674 aaPredicted RBP11.59□□□□□ -0.55
PRICKLE1-221ENST00000640946 ATF3P18847 181 aa11.59□□□□□ -0.55
PRICKLE1-221ENST00000640946 ZNF326Q5BKZ1 582 aaKnown RBP11.59□□□□□ -0.55
PRICKLE1-221ENST00000640946 C14orf37Q86TY3 774 aa11.59□□□□□ -0.55
PRICKLE1-221ENST00000640946 EP400Q96L91 3159 aa11.59□□□□□ -0.55
PRICKLE1-221ENST00000640946 DCCP43146 1447 aa11.59□□□□□ -0.55
PRICKLE1-221ENST00000640946 AMOTL2Q9Y2J4 779 aa11.58□□□□□ -0.56
PRICKLE1-221ENST00000640946 PPLO60437 1756 aa11.58□□□□□ -0.56
PRICKLE1-221ENST00000640946 IFT172Q9UG01 1749 aa11.57□□□□□ -0.56
PRICKLE1-221ENST00000640946 PNPLA6Q8IY17 1366 aa11.57□□□□□ -0.56
PRICKLE1-221ENST00000640946 RGL3Q3MIN7 710 aa11.57□□□□□ -0.56
PRICKLE1-221ENST00000640946 DDX17Q92841 729 aaKnown RBP11.57□□□□□ -0.56
PRICKLE1-221ENST00000640946 SETBP1Q9Y6X0 1596 aa11.57□□□□□ -0.56
PRICKLE1-221ENST00000640946 NALCNQ8IZF0 1738 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 260.1 ms