RNA–Protein interactions for RNA: ENST00000640859.1

GFAP-238, Transcript of glial fibrillary acidic protein, humanhuman

TSL 5

Gene GFAP, Length 1,162 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-238ENST00000640859 NEURL4Q96JN8 1562 aa15.61■□□□□ 0.09
GFAP-238ENST00000640859 SIGLEC1Q9BZZ2 1709 aa15.6■□□□□ 0.09
GFAP-238ENST00000640859 EFCAB6Q5THR3 1501 aa15.6■□□□□ 0.09
GFAP-238ENST00000640859 RIMS1Q86UR5 1692 aaKnown RBP15.6■□□□□ 0.09
GFAP-238ENST00000640859 ZBTB22O15209 634 aa15.59■□□□□ 0.09
GFAP-238ENST00000640859 STAC3Q96MF2 364 aa15.59■□□□□ 0.09
GFAP-238ENST00000640859 ST20-MTHFSA0A0A6YYL1 179 aa15.58■□□□□ 0.08
GFAP-238ENST00000640859 NBPF1Q3BBV0 1214 aa15.58■□□□□ 0.08
GFAP-238ENST00000640859 CEBPAP49715 358 aaPredicted RBP15.57■□□□□ 0.08
GFAP-238ENST00000640859 ZC3H13Q5T200 1668 aaKnown RBP15.57■□□□□ 0.08
GFAP-238ENST00000640859 PRKRIP1Q9H875 184 aaPredicted RBP15.56■□□□□ 0.08
GFAP-238ENST00000640859 MROH2AA6NES4 1674 aa15.55■□□□□ 0.08
GFAP-238ENST00000640859 CLTCQ00610 1675 aaKnown RBP15.54■□□□□ 0.08
GFAP-238ENST00000640859 ABCC3O15438 1527 aa15.54■□□□□ 0.08
GFAP-238ENST00000640859 NPATQ14207 1427 aa15.54■□□□□ 0.08
GFAP-238ENST00000640859 DCAF8L1A6NGE4 600 aa15.54■□□□□ 0.08
GFAP-238ENST00000640859 KIF1BO60333 1816 aa15.54■□□□□ 0.08
GFAP-238ENST00000640859 ARHGAP31Q2M1Z3 1444 aa15.51■□□□□ 0.07
GFAP-238ENST00000640859 FOXD4L1Q9NU39 408 aa15.51■□□□□ 0.07
GFAP-238ENST00000640859 KIAA1210Q9ULL0 1709 aa15.51■□□□□ 0.07
GFAP-238ENST00000640859 TNRQ92752 1358 aa15.5■□□□□ 0.07
GFAP-238ENST00000640859 UGGT1Q9NYU2 1555 aa15.5■□□□□ 0.07
GFAP-238ENST00000640859 SLC4A2P04920 1241 aa15.5■□□□□ 0.07
GFAP-238ENST00000640859 STAG3Q9UJ98 1225 aa15.5■□□□□ 0.07
GFAP-238ENST00000640859 IFT172Q9UG01 1749 aa15.49■□□□□ 0.07
GFAP-238ENST00000640859 IQGAP1P46940 1657 aa15.49■□□□□ 0.07
GFAP-238ENST00000640859 TESK2Q96S53 571 aa15.49■□□□□ 0.07
GFAP-238ENST00000640859 POLR3GLQ9BT43 218 aa15.49■□□□□ 0.07
GFAP-238ENST00000640859 MYOM2P54296 1465 aa15.48■□□□□ 0.07
GFAP-238ENST00000640859 CAMSAP1Q5T5Y3 1602 aa15.48■□□□□ 0.07
GFAP-238ENST00000640859 CCDC184Q52MB2 194 aa15.48■□□□□ 0.07
GFAP-238ENST00000640859 FBXO31Q5XUX0 539 aaPredicted RBP15.48■□□□□ 0.07
GFAP-238ENST00000640859 C3P01024 1663 aa15.48■□□□□ 0.07
GFAP-238ENST00000640859 CFAP65Q6ZU64 1925 aaKnown RBP15.47■□□□□ 0.07
GFAP-238ENST00000640859 POTEDQ86YR6 584 aa15.47■□□□□ 0.07
GFAP-238ENST00000640859 SLC52A1Q9NWF4 448 aa15.46■□□□□ 0.07
GFAP-238ENST00000640859 ADGRB3O60242 1522 aa15.46■□□□□ 0.07
GFAP-238ENST00000640859 NOS1P29475 1434 aa15.45■□□□□ 0.06
GFAP-238ENST00000640859 NLRP1Q9C000 1473 aa15.45■□□□□ 0.06
GFAP-238ENST00000640859 SETD1BQ9UPS6 1966 aaKnown RBP15.44■□□□□ 0.06
GFAP-238ENST00000640859 ERVK-7P63135 1459 aa15.44■□□□□ 0.06
GFAP-238ENST00000640859 SCAF11Q99590 1463 aaKnown RBP15.44■□□□□ 0.06
GFAP-238ENST00000640859 NRXN1Q9ULB1 1477 aa15.44■□□□□ 0.06
GFAP-238ENST00000640859 THEMISQ8N1K5 641 aaPredicted RBP15.43■□□□□ 0.06
GFAP-238ENST00000640859 DISP3Q9P2K9 1392 aa15.43■□□□□ 0.06
GFAP-238ENST00000640859 PIK3C2BO00750 1634 aa15.42■□□□□ 0.06
GFAP-238ENST00000640859 ADGRF5Q8IZF2 1346 aa15.42■□□□□ 0.06
GFAP-238ENST00000640859 TMF1P82094 1093 aa15.41■□□□□ 0.06
GFAP-238ENST00000640859 MRS2Q9HD23 443 aa15.41■□□□□ 0.06
GFAP-238ENST00000640859 PPLO60437 1756 aa15.41■□□□□ 0.06
GFAP-238ENST00000640859 PREX1Q8TCU6 1659 aa15.41■□□□□ 0.06
GFAP-238ENST00000640859 SPATA31D1Q6ZQQ2 1576 aa15.41■□□□□ 0.06
GFAP-238ENST00000640859 CHGAP10645 457 aaKnown RBP15.4■□□□□ 0.06
GFAP-238ENST00000640859 HDGFP51858 240 aaKnown RBP15.4■□□□□ 0.06
GFAP-238ENST00000640859 SYNMO15061 1565 aa15.4■□□□□ 0.06
GFAP-238ENST00000640859 RPGRIP1LQ68CZ1 1315 aa15.4■□□□□ 0.06
GFAP-238ENST00000640859 KTN1Q86UP2 1357 aaKnown RBP15.39■□□□□ 0.05
GFAP-238ENST00000640859 A2ML1A8K2U0 1454 aa15.39■□□□□ 0.05
GFAP-238ENST00000640859 CFAP70Q5T0N1 1121 aa15.38■□□□□ 0.05
GFAP-238ENST00000640859 PER1O15534 1290 aaPredicted RBP15.37■□□□□ 0.05
GFAP-238ENST00000640859 HNRNPUQ00839 825 aaKnown RBP eCLIP15.37■□□□□ 0.05
GFAP-238ENST00000640859 RALBP1Q15311 655 aa15.37■□□□□ 0.05
GFAP-238ENST00000640859 EID1Q9Y6B2 187 aa15.37■□□□□ 0.05
GFAP-238ENST00000640859 LMTK3Q96Q04 1460 aa15.36■□□□□ 0.05
GFAP-238ENST00000640859 IDI1Q13907 227 aa15.36■□□□□ 0.05
GFAP-238ENST00000640859 CEP170BQ9Y4F5 1589 aaPredicted RBP15.36■□□□□ 0.05
GFAP-238ENST00000640859 SETBP1Q9Y6X0 1596 aa15.36■□□□□ 0.05
GFAP-238ENST00000640859 MYO3AQ8NEV4 1616 aa15.35■□□□□ 0.05
GFAP-238ENST00000640859 HSPA2P54652 639 aa15.35■□□□□ 0.05
GFAP-238ENST00000640859 ANKLE2Q86XL3 938 aa15.35■□□□□ 0.05
GFAP-238ENST00000640859 EIF3AQ14152 1382 aaKnown RBP15.35■□□□□ 0.05
GFAP-238ENST00000640859 FAM9BQ8IZU0 186 aa15.34■□□□□ 0.05
GFAP-238ENST00000640859 C14orf93Q9H972 538 aaKnown RBP15.33■□□□□ 0.04
GFAP-238ENST00000640859 PARD3Q8TEW0 1356 aa15.33■□□□□ 0.04
GFAP-238ENST00000640859 PIK3C2GO75747 1445 aa15.33■□□□□ 0.04
GFAP-238ENST00000640859 CDCA8Q53HL2 280 aa15.32■□□□□ 0.04
GFAP-238ENST00000640859 PANK3Q9H999 370 aa15.32■□□□□ 0.04
GFAP-238ENST00000640859 SUPT16HQ9Y5B9 1047 aaKnown RBP15.32■□□□□ 0.04
GFAP-238ENST00000640859 MYBBP1AQ9BQG0 1328 aaKnown RBP15.32■□□□□ 0.04
GFAP-238ENST00000640859 BRD4O60885 1362 aaPredicted RBP15.32■□□□□ 0.04
GFAP-238ENST00000640859 SLC24A1O60721 1099 aa15.31■□□□□ 0.04
GFAP-238ENST00000640859 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.31■□□□□ 0.04
GFAP-238ENST00000640859 NEXMIFQ5QGS0 1516 aa15.31■□□□□ 0.04
GFAP-238ENST00000640859 ZNF142P52746 1687 aaPredicted RBP15.3■□□□□ 0.04
GFAP-238ENST00000640859 CNGB1Q14028 1251 aaPredicted RBP15.3■□□□□ 0.04
GFAP-238ENST00000640859 PNISRQ8TF01 805 aaKnown RBP15.3■□□□□ 0.04
GFAP-238ENST00000640859 BCANQ96GW7 911 aa15.3■□□□□ 0.04
GFAP-238ENST00000640859 ADGRB1O14514 1584 aa15.29■□□□□ 0.04
GFAP-238ENST00000640859 ZFYVE9O95405 1425 aa15.29■□□□□ 0.04
GFAP-238ENST00000640859 ZBED9Q6R2W3 1325 aa15.28■□□□□ 0.04
GFAP-238ENST00000640859 TXNDC2Q86VQ3 553 aa15.28■□□□□ 0.04
GFAP-238ENST00000640859 MYO5BQ9ULV0 1848 aa15.28■□□□□ 0.04
GFAP-238ENST00000640859 KDM5AP29375 1690 aaKnown RBP15.28■□□□□ 0.04
GFAP-238ENST00000640859 MYOM1P52179 1685 aa15.28■□□□□ 0.04
GFAP-238ENST00000640859 TMEM131LA2VDJ0 1609 aa15.28■□□□□ 0.04
GFAP-238ENST00000640859 SBNO2Q9Y2G9 1366 aa15.27■□□□□ 0.04
GFAP-238ENST00000640859 VGFO15240 615 aaPredicted RBP15.27■□□□□ 0.04
GFAP-238ENST00000640859 TMC1Q8TDI8 760 aa15.27■□□□□ 0.04
GFAP-238ENST00000640859 LRPPRCP42704 1394 aaKnown RBP15.26■□□□□ 0.03
GFAP-238ENST00000640859 TMEM2Q9UHN6 1383 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms