RNA–Protein interactions for RNA: ENST00000640640.1

SCARB2-223, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5 BASIC

Gene SCARB2, Length 4,608 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-223ENST00000640640 FAM161AQ3B820 660 aa22.02■■□□□ 1.12
SCARB2-223ENST00000640640 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.02■■□□□ 1.12
SCARB2-223ENST00000640640 PLCB2Q00722 1185 aa22.02■■□□□ 1.11
SCARB2-223ENST00000640640 TAOK2Q9UL54 1235 aa22.02■■□□□ 1.11
SCARB2-223ENST00000640640 PLB1Q6P1J6 1458 aa22■■□□□ 1.11
SCARB2-223ENST00000640640 HDAC5Q9UQL6 1122 aa22■■□□□ 1.11
SCARB2-223ENST00000640640 ZNF330Q9Y3S2 320 aaPredicted RBP21.99■■□□□ 1.11
SCARB2-223ENST00000640640 PPP2R1AP30153 589 aa21.99■■□□□ 1.11
SCARB2-223ENST00000640640 MTHFSP49914 203 aa21.99■■□□□ 1.11
SCARB2-223ENST00000640640 CDCA7LQ96GN5 454 aa21.98■■□□□ 1.11
SCARB2-223ENST00000640640 GLIPR1L2Q4G1C9 344 aa21.98■■□□□ 1.11
SCARB2-223ENST00000640640 GBP4Q96PP9 640 aa21.98■■□□□ 1.11
SCARB2-223ENST00000640640 GOLGA6L4A6NEF3 574 aa21.98■■□□□ 1.11
SCARB2-223ENST00000640640 ARHGEF11O15085 1522 aa21.97■■□□□ 1.11
SCARB2-223ENST00000640640 TRIM6-TRIM34B2RNG4 842 aa21.97■■□□□ 1.11
SCARB2-223ENST00000640640 GRIN2AQ12879 1464 aa21.97■■□□□ 1.11
SCARB2-223ENST00000640640 L1TD1Q5T7N2 865 aaKnown RBP21.97■■□□□ 1.11
SCARB2-223ENST00000640640 PNISRQ8TF01 805 aaKnown RBP21.97■■□□□ 1.11
SCARB2-223ENST00000640640 MAGI1Q96QZ7 1491 aaPredicted RBP21.96■■□□□ 1.11
SCARB2-223ENST00000640640 CCDC184Q52MB2 194 aa21.96■■□□□ 1.11
SCARB2-223ENST00000640640 ABCC5O15440 1437 aa21.96■■□□□ 1.11
SCARB2-223ENST00000640640 DZIP1LQ8IYY4 767 aaKnown RBP21.96■■□□□ 1.11
SCARB2-223ENST00000640640 ANKRD30BQ9BXX2 1392 aa21.96■■□□□ 1.11
SCARB2-223ENST00000640640 DNTTIP2Q5QJE6 756 aaKnown RBP21.95■■□□□ 1.1
SCARB2-223ENST00000640640 DDX19BQ9UMR2 479 aa21.95■■□□□ 1.1
SCARB2-223ENST00000640640 PTPN23Q9H3S7 1636 aa21.95■■□□□ 1.1
SCARB2-223ENST00000640640 ANKRD45Q5TZF3 282 aa21.94■■□□□ 1.1
SCARB2-223ENST00000640640 SLC12A5Q9H2X9 1139 aa21.93■■□□□ 1.1
SCARB2-223ENST00000640640 TCP11L2Q8N4U5 519 aa21.92■■□□□ 1.1
SCARB2-223ENST00000640640 GZF1Q9H116 711 aaPredicted RBP21.92■■□□□ 1.1
SCARB2-223ENST00000640640 CAMSAP2Q08AD1 1489 aa21.91■■□□□ 1.1
SCARB2-223ENST00000640640 HMOX1P09601 288 aa21.91■■□□□ 1.1
SCARB2-223ENST00000640640 CCDC141Q6ZP82 1450 aa21.91■■□□□ 1.1
SCARB2-223ENST00000640640 FANCIQ9NVI1 1328 aa21.91■■□□□ 1.1
SCARB2-223ENST00000640640 RAPGEF3O95398 923 aa21.9■■□□□ 1.1
SCARB2-223ENST00000640640 TEFQ10587 303 aa21.89■■□□□ 1.1
SCARB2-223ENST00000640640 ZNF608Q9ULD9 1512 aaPredicted RBP21.89■■□□□ 1.09
SCARB2-223ENST00000640640 NCOA1Q15788 1441 aa21.88■■□□□ 1.09
SCARB2-223ENST00000640640 SLC4A3P48751 1232 aa21.88■■□□□ 1.09
SCARB2-223ENST00000640640 GPATCH3Q96I76 525 aa21.88■■□□□ 1.09
SCARB2-223ENST00000640640 SLC52A1Q9NWF4 448 aa21.88■■□□□ 1.09
SCARB2-223ENST00000640640 API5Q9BZZ5 524 aaKnown RBP21.87■■□□□ 1.09
SCARB2-223ENST00000640640 CHMP3Q9Y3E7 222 aa21.87■■□□□ 1.09
SCARB2-223ENST00000640640 PRAM1Q96QH2 718 aa21.87■■□□□ 1.09
SCARB2-223ENST00000640640 GNAI1P63096 354 aa21.86■■□□□ 1.09
SCARB2-223ENST00000640640 AKNAQ7Z591 1439 aa21.86■■□□□ 1.09
SCARB2-223ENST00000640640 KIF16BQ96L93 1317 aa21.86■■□□□ 1.09
SCARB2-223ENST00000640640 ERBINQ96RT1 1412 aa21.86■■□□□ 1.09
SCARB2-223ENST00000640640 C11orf95C9JLR9 678 aaPredicted RBP21.86■■□□□ 1.09
SCARB2-223ENST00000640640 PANK1Q8TE04 598 aa21.86■■□□□ 1.09
SCARB2-223ENST00000640640 PTMSP20962 102 aa21.84■■□□□ 1.09
SCARB2-223ENST00000640640 C1orf141Q5JVX7 400 aa21.84■■□□□ 1.09
SCARB2-223ENST00000640640 NAP1L5Q96NT1 182 aaPredicted RBP21.84■■□□□ 1.09
SCARB2-223ENST00000640640 FOXD4L1Q9NU39 408 aa21.83■■□□□ 1.08
SCARB2-223ENST00000640640 GORABQ5T7V8 394 aa21.82■■□□□ 1.08
SCARB2-223ENST00000640640 PSME1Q06323 249 aa21.82■■□□□ 1.08
SCARB2-223ENST00000640640 ST18O60284 1047 aa21.8■■□□□ 1.08
SCARB2-223ENST00000640640 EIF2S2P20042 333 aaKnown RBP21.79■■□□□ 1.08
SCARB2-223ENST00000640640 AAMPQ13685 434 aa21.79■■□□□ 1.08
SCARB2-223ENST00000640640 USP35Q9P2H5 1018 aa21.79■■□□□ 1.08
SCARB2-223ENST00000640640 TAF7LQ5H9L4 462 aa21.79■■□□□ 1.08
SCARB2-223ENST00000640640 NOL8Q76FK4 1167 aaKnown RBP21.78■■□□□ 1.08
SCARB2-223ENST00000640640 CDK11BP21127 795 aaKnown RBP21.78■■□□□ 1.08
SCARB2-223ENST00000640640 NECTIN2Q92692 538 aa21.78■■□□□ 1.08
SCARB2-223ENST00000640640 RILPL2Q969X0 211 aa21.78■■□□□ 1.08
SCARB2-223ENST00000640640 RPGRIP1LQ68CZ1 1315 aa21.77■■□□□ 1.08
SCARB2-223ENST00000640640 TXNDC2Q86VQ3 553 aa21.77■■□□□ 1.08
SCARB2-223ENST00000640640 NLRP6P59044 892 aa21.76■■□□□ 1.07
SCARB2-223ENST00000640640 FKBP5Q13451 457 aaPredicted RBP21.76■■□□□ 1.07
SCARB2-223ENST00000640640 KIF14Q15058 1648 aa21.76■■□□□ 1.07
SCARB2-223ENST00000640640 PRKAR2BP31323 418 aa21.76■■□□□ 1.07
SCARB2-223ENST00000640640 TSPYL4Q9UJ04 414 aa21.75■■□□□ 1.07
SCARB2-223ENST00000640640 RPRD2Q5VT52 1461 aaKnown RBP21.75■■□□□ 1.07
SCARB2-223ENST00000640640 CABP1Q9NZU7 370 aa21.75■■□□□ 1.07
SCARB2-223ENST00000640640 MSNP26038 577 aaKnown RBP21.75■■□□□ 1.07
SCARB2-223ENST00000640640 LNPKQ9C0E8 428 aa21.75■■□□□ 1.07
SCARB2-223ENST00000640640 CCDC9Q9Y3X0 531 aaKnown RBP21.74■■□□□ 1.07
SCARB2-223ENST00000640640 CDK19Q9BWU1 502 aa21.73■■□□□ 1.07
SCARB2-223ENST00000640640 EXOSC9Q06265 439 aaKnown RBP21.73■■□□□ 1.07
SCARB2-223ENST00000640640 THOC2Q8NI27 1593 aaKnown RBP21.72■■□□□ 1.07
SCARB2-223ENST00000640640 GOLGA6L3A6NEY3 463 aa21.72■■□□□ 1.07
SCARB2-223ENST00000640640 GOLGA6L6A8MZA4 724 aa21.72■■□□□ 1.07
SCARB2-223ENST00000640640 NRDCO43847 1150 aa21.72■■□□□ 1.07
SCARB2-223ENST00000640640 NUTM2GQ5VZR2 741 aa21.72■■□□□ 1.07
SCARB2-223ENST00000640640 SMG6Q86US8 1419 aaKnown RBP21.72■■□□□ 1.07
SCARB2-223ENST00000640640 C9orf78Q9NZ63 289 aaPredicted RBP21.72■■□□□ 1.07
SCARB2-223ENST00000640640 PTPRKQ15262 1439 aa21.71■■□□□ 1.07
SCARB2-223ENST00000640640 PDE3AQ14432 1141 aa21.71■■□□□ 1.07
SCARB2-223ENST00000640640 SYAP1Q96A49 352 aaPredicted RBP21.71■■□□□ 1.07
SCARB2-223ENST00000640640 NEXNQ0ZGT2 675 aa21.7■■□□□ 1.06
SCARB2-223ENST00000640640 GNL2Q13823 731 aaKnown RBP21.7■■□□□ 1.06
SCARB2-223ENST00000640640 BCAR3O75815 825 aa21.7■■□□□ 1.06
SCARB2-223ENST00000640640 TTC5Q8N0Z6 440 aa21.69■■□□□ 1.06
SCARB2-223ENST00000640640 GPATCH8Q9UKJ3 1502 aaKnown RBP21.68■■□□□ 1.06
SCARB2-223ENST00000640640 REC8O95072 547 aa21.68■■□□□ 1.06
SCARB2-223ENST00000640640 TSR2Q969E8 191 aaKnown RBP21.67■■□□□ 1.06
SCARB2-223ENST00000640640 HTATSF1O43719 755 aaKnown RBP21.67■■□□□ 1.06
SCARB2-223ENST00000640640 CD109Q6YHK3 1445 aa21.66■■□□□ 1.06
SCARB2-223ENST00000640640 HSP90B1P14625 803 aaKnown RBP21.65■■□□□ 1.06
SCARB2-223ENST00000640640 ADGRL1O94910 1474 aa21.64■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms