RNA–Protein interactions for RNA: ENST00000639943.1

PAX6-261, Transcript of paired box 6, humanhuman

TSL 5

Gene PAX6, Length 2,584 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-261ENST00000639943 GTF3C3Q9Y5Q9 886 aa16.89■□□□□ 0.29
PAX6-261ENST00000639943 KIAA1210Q9ULL0 1709 aa16.89■□□□□ 0.29
PAX6-261ENST00000639943 PRKRIP1Q9H875 184 aaPredicted RBP16.88■□□□□ 0.29
PAX6-261ENST00000639943 MYOM2P54296 1465 aa16.88■□□□□ 0.29
PAX6-261ENST00000639943 IFT172Q9UG01 1749 aa16.87■□□□□ 0.29
PAX6-261ENST00000639943 ARHGAP31Q2M1Z3 1444 aa16.87■□□□□ 0.29
PAX6-261ENST00000639943 MROH2AA6NES4 1674 aa16.86■□□□□ 0.29
PAX6-261ENST00000639943 ADGRB3O60242 1522 aa16.86■□□□□ 0.29
PAX6-261ENST00000639943 REREQ9P2R6 1566 aa16.86■□□□□ 0.29
PAX6-261ENST00000639943 NOS1P29475 1434 aa16.85■□□□□ 0.29
PAX6-261ENST00000639943 IQGAP1P46940 1657 aa16.85■□□□□ 0.29
PAX6-261ENST00000639943 SIGLEC1Q9BZZ2 1709 aa16.83■□□□□ 0.28
PAX6-261ENST00000639943 TESK2Q96S53 571 aa16.83■□□□□ 0.28
PAX6-261ENST00000639943 COL17A1Q9UMD9 1497 aaPredicted RBP16.83■□□□□ 0.28
PAX6-261ENST00000639943 SCAF11Q99590 1463 aaKnown RBP16.82■□□□□ 0.28
PAX6-261ENST00000639943 AGLP35573 1532 aa16.82■□□□□ 0.28
PAX6-261ENST00000639943 PIK3C2BO00750 1634 aa16.81■□□□□ 0.28
PAX6-261ENST00000639943 NPM3O75607 178 aaKnown RBP16.81■□□□□ 0.28
PAX6-261ENST00000639943 NRXN1Q9ULB1 1477 aa16.81■□□□□ 0.28
PAX6-261ENST00000639943 CHGAP10645 457 aaKnown RBP16.81■□□□□ 0.28
PAX6-261ENST00000639943 RPGRIP1LQ68CZ1 1315 aa16.8■□□□□ 0.28
PAX6-261ENST00000639943 PPLO60437 1756 aa16.8■□□□□ 0.28
PAX6-261ENST00000639943 TMF1P82094 1093 aa16.8■□□□□ 0.28
PAX6-261ENST00000639943 ADGRF5Q8IZF2 1346 aa16.8■□□□□ 0.28
PAX6-261ENST00000639943 SYNMO15061 1565 aa16.79■□□□□ 0.28
PAX6-261ENST00000639943 EIF3AQ14152 1382 aaKnown RBP16.78■□□□□ 0.28
PAX6-261ENST00000639943 DISP3Q9P2K9 1392 aa16.77■□□□□ 0.28
PAX6-261ENST00000639943 PREX1Q8TCU6 1659 aa16.76■□□□□ 0.27
PAX6-261ENST00000639943 SLC52A1Q9NWF4 448 aa16.76■□□□□ 0.27
PAX6-261ENST00000639943 CFAP70Q5T0N1 1121 aa16.76■□□□□ 0.27
PAX6-261ENST00000639943 ARHGEF40Q8TER5 1519 aa16.75■□□□□ 0.27
PAX6-261ENST00000639943 MRS2Q9HD23 443 aa16.75■□□□□ 0.27
PAX6-261ENST00000639943 KTN1Q86UP2 1357 aaKnown RBP16.75■□□□□ 0.27
PAX6-261ENST00000639943 SETBP1Q9Y6X0 1596 aa16.74■□□□□ 0.27
PAX6-261ENST00000639943 CCDC184Q52MB2 194 aa16.74■□□□□ 0.27
PAX6-261ENST00000639943 CDCA8Q53HL2 280 aa16.73■□□□□ 0.27
PAX6-261ENST00000639943 PIK3C2GO75747 1445 aa16.73■□□□□ 0.27
PAX6-261ENST00000639943 PPP4R3CPQ6ZMV5 832 aa16.73■□□□□ 0.27
PAX6-261ENST00000639943 IDI1Q13907 227 aa16.72■□□□□ 0.27
PAX6-261ENST00000639943 RALBP1Q15311 655 aa16.71■□□□□ 0.26
PAX6-261ENST00000639943 C14orf93Q9H972 538 aaKnown RBP16.71■□□□□ 0.26
PAX6-261ENST00000639943 VGFO15240 615 aaPredicted RBP16.7■□□□□ 0.26
PAX6-261ENST00000639943 NEXMIFQ5QGS0 1516 aa16.7■□□□□ 0.26
PAX6-261ENST00000639943 CLTCQ00610 1675 aaKnown RBP16.7■□□□□ 0.26
PAX6-261ENST00000639943 ERVK-7P63135 1459 aa16.69■□□□□ 0.26
PAX6-261ENST00000639943 HNRNPUQ00839 825 aaKnown RBP eCLIP16.69■□□□□ 0.26
PAX6-261ENST00000639943 MYO3AQ8NEV4 1616 aa16.68■□□□□ 0.26
PAX6-261ENST00000639943 PER1O15534 1290 aaPredicted RBP16.68■□□□□ 0.26
PAX6-261ENST00000639943 TMEM131LA2VDJ0 1609 aa16.67■□□□□ 0.26
PAX6-261ENST00000639943 MYO5BQ9ULV0 1848 aa16.67■□□□□ 0.26
PAX6-261ENST00000639943 CNGB1Q14028 1251 aaPredicted RBP16.67■□□□□ 0.26
PAX6-261ENST00000639943 ZFYVE9O95405 1425 aa16.67■□□□□ 0.26
PAX6-261ENST00000639943 FAM9BQ8IZU0 186 aa16.67■□□□□ 0.26
PAX6-261ENST00000639943 PANK3Q9H999 370 aa16.67■□□□□ 0.26
PAX6-261ENST00000639943 MYBBP1AQ9BQG0 1328 aaKnown RBP16.66■□□□□ 0.26
PAX6-261ENST00000639943 FBXO31Q5XUX0 539 aaPredicted RBP16.65■□□□□ 0.26
PAX6-261ENST00000639943 KDM5AP29375 1690 aaKnown RBP16.65■□□□□ 0.26
PAX6-261ENST00000639943 ADGRB1O14514 1584 aa16.65■□□□□ 0.26
PAX6-261ENST00000639943 SBNO2Q9Y2G9 1366 aa16.64■□□□□ 0.25
PAX6-261ENST00000639943 SPATA31D1Q6ZQQ2 1576 aa16.63■□□□□ 0.25
PAX6-261ENST00000639943 BRD4O60885 1362 aaPredicted RBP16.63■□□□□ 0.25
PAX6-261ENST00000639943 PARD3Q8TEW0 1356 aa16.63■□□□□ 0.25
PAX6-261ENST00000639943 MLECQ14165 292 aa16.63■□□□□ 0.25
PAX6-261ENST00000639943 TMC1Q8TDI8 760 aa16.62■□□□□ 0.25
PAX6-261ENST00000639943 CENPJQ9HC77 1338 aaPredicted RBP16.62■□□□□ 0.25
PAX6-261ENST00000639943 ESF1Q9H501 851 aaKnown RBP16.61■□□□□ 0.25
PAX6-261ENST00000639943 MYOM1P52179 1685 aa16.6■□□□□ 0.25
PAX6-261ENST00000639943 NUTM2DQ5VT03 806 aaPredicted RBP16.6■□□□□ 0.25
PAX6-261ENST00000639943 TRAK1Q9UPV9 953 aa16.6■□□□□ 0.25
PAX6-261ENST00000639943 TMEM132EQ6IEE7 984 aa16.59■□□□□ 0.25
PAX6-261ENST00000639943 STAG3Q9UJ98 1225 aa16.59■□□□□ 0.25
PAX6-261ENST00000639943 QRICH2Q9H0J4 1663 aa16.59■□□□□ 0.25
PAX6-261ENST00000639943 NLRP13Q86W25 1043 aa16.59■□□□□ 0.25
PAX6-261ENST00000639943 KNSTRNQ9Y448 316 aa16.58■□□□□ 0.25
PAX6-261ENST00000639943 PNISRQ8TF01 805 aaKnown RBP16.58■□□□□ 0.24
PAX6-261ENST00000639943 BCL11AQ9H165 835 aa16.57■□□□□ 0.24
PAX6-261ENST00000639943 ZBED9Q6R2W3 1325 aa16.57■□□□□ 0.24
PAX6-261ENST00000639943 ZMYM3Q14202 1370 aa16.57■□□□□ 0.24
PAX6-261ENST00000639943 CC2D1BQ5T0F9 858 aaKnown RBP16.57■□□□□ 0.24
PAX6-261ENST00000639943 TRHP20396 242 aaPredicted RBP16.56■□□□□ 0.24
PAX6-261ENST00000639943 ARHGEF28Q8N1W1 1705 aaKnown RBP16.56■□□□□ 0.24
PAX6-261ENST00000639943 A2ML1A8K2U0 1454 aa16.55■□□□□ 0.24
PAX6-261ENST00000639943 ASXL1Q8IXJ9 1541 aa16.53■□□□□ 0.24
PAX6-261ENST00000639943 NPC1L1Q9UHC9 1359 aa16.53■□□□□ 0.24
PAX6-261ENST00000639943 LRPPRCP42704 1394 aaKnown RBP16.53■□□□□ 0.24
PAX6-261ENST00000639943 PUS7Q96PZ0 661 aaKnown RBP16.51■□□□□ 0.23
PAX6-261ENST00000639943 SUPT16HQ9Y5B9 1047 aaKnown RBP16.51■□□□□ 0.23
PAX6-261ENST00000639943 ALKQ9UM73 1620 aa16.51■□□□□ 0.23
PAX6-261ENST00000639943 RIMS2Q9UQ26 1411 aa16.5■□□□□ 0.23
PAX6-261ENST00000639943 EVC2Q86UK5 1308 aa16.49■□□□□ 0.23
PAX6-261ENST00000639943 NEFLP07196 543 aa16.48■□□□□ 0.23
PAX6-261ENST00000639943 TNRQ92752 1358 aa16.48■□□□□ 0.23
PAX6-261ENST00000639943 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.48■□□□□ 0.23
PAX6-261ENST00000639943 YTHDC2Q9H6S0 1430 aaKnown RBP16.48■□□□□ 0.23
PAX6-261ENST00000639943 STK26Q9P289 416 aa16.46■□□□□ 0.23
PAX6-261ENST00000639943 INSRP06213 1382 aa16.46■□□□□ 0.22
PAX6-261ENST00000639943 HDGFP51858 240 aaKnown RBP16.45■□□□□ 0.22
PAX6-261ENST00000639943 PTPRMP28827 1452 aa16.45■□□□□ 0.22
PAX6-261ENST00000639943 TULP4Q9NRJ4 1543 aa16.45■□□□□ 0.22
PAX6-261ENST00000639943 PPP2R1AP30153 589 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms