RNA–Protein interactions for RNA: ENST00000639841.1

NECAP1-220, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 1,982 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-220ENST00000639841 GLI2P10070 1586 aa10.86□□□□□ -0.67
NECAP1-220ENST00000639841 CARMIL2Q6F5E8 1435 aa10.86□□□□□ -0.67
NECAP1-220ENST00000639841 KIF27Q86VH2 1401 aa10.86□□□□□ -0.67
NECAP1-220ENST00000639841 NUTM2FA1L443 756 aa10.86□□□□□ -0.67
NECAP1-220ENST00000639841 POM121CA8CG34 1229 aa10.86□□□□□ -0.67
NECAP1-220ENST00000639841 GLMNQ92990 594 aa10.85□□□□□ -0.67
NECAP1-220ENST00000639841 PLB1Q6P1J6 1458 aa10.85□□□□□ -0.67
NECAP1-220ENST00000639841 SPDYE16A6NNV3 312 aaPredicted RBP10.85□□□□□ -0.67
NECAP1-220ENST00000639841 TBC1D12O60347 775 aa10.85□□□□□ -0.67
NECAP1-220ENST00000639841 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.84□□□□□ -0.67
NECAP1-220ENST00000639841 SRPK2P78362 688 aaKnown RBP10.84□□□□□ -0.67
NECAP1-220ENST00000639841 MS4A4AQ96JQ5 239 aa10.84□□□□□ -0.67
NECAP1-220ENST00000639841 UHRF1BP1LA0JNW5 1464 aa10.83□□□□□ -0.68
NECAP1-220ENST00000639841 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.83□□□□□ -0.68
NECAP1-220ENST00000639841 CWC22Q9HCG8 908 aaKnown RBP10.83□□□□□ -0.68
NECAP1-220ENST00000639841 ABCC2Q92887 1545 aa10.82□□□□□ -0.68
NECAP1-220ENST00000639841 TMUB1Q9BVT8 246 aa10.81□□□□□ -0.68
NECAP1-220ENST00000639841 GDPD2Q9HCC8 539 aa10.81□□□□□ -0.68
NECAP1-220ENST00000639841 TEX14Q8IWB6 1497 aa10.81□□□□□ -0.68
NECAP1-220ENST00000639841 CABP2Q9NPB3 220 aa10.81□□□□□ -0.68
NECAP1-220ENST00000639841 TNIKQ9UKE5 1360 aa10.81□□□□□ -0.68
NECAP1-220ENST00000639841 PTPRGP23470 1445 aa10.8□□□□□ -0.68
NECAP1-220ENST00000639841 HIC1Q14526 733 aa10.8□□□□□ -0.68
NECAP1-220ENST00000639841 PPP1R15BQ5SWA1 713 aa10.8□□□□□ -0.68
NECAP1-220ENST00000639841 FBXO31Q5XUX0 539 aaPredicted RBP10.8□□□□□ -0.68
NECAP1-220ENST00000639841 TXNDC2Q86VQ3 553 aa10.8□□□□□ -0.68
NECAP1-220ENST00000639841 CSB-PGBD3P0DP91 1061 aa10.79□□□□□ -0.68
NECAP1-220ENST00000639841 BANK1Q8NDB2 785 aa10.79□□□□□ -0.68
NECAP1-220ENST00000639841 POLR3EQ9NVU0 708 aa10.79□□□□□ -0.68
NECAP1-220ENST00000639841 IQGAP2Q13576 1575 aa10.78□□□□□ -0.68
NECAP1-220ENST00000639841 SMARCA5O60264 1052 aaPredicted RBP10.78□□□□□ -0.68
NECAP1-220ENST00000639841 MRRFQ96E11 262 aaKnown RBP10.78□□□□□ -0.68
NECAP1-220ENST00000639841 IGF1RP08069 1367 aa10.77□□□□□ -0.69
NECAP1-220ENST00000639841 RFX1P22670 979 aa10.77□□□□□ -0.69
NECAP1-220ENST00000639841 TSPOAP1O95153 1857 aa10.76□□□□□ -0.69
NECAP1-220ENST00000639841 CFAP70Q5T0N1 1121 aa10.76□□□□□ -0.69
NECAP1-220ENST00000639841 MTMR14Q8NCE2 650 aa10.76□□□□□ -0.69
NECAP1-220ENST00000639841 SPATA32Q96LK8 384 aa10.76□□□□□ -0.69
NECAP1-220ENST00000639841 RFC5P40937 340 aa10.75□□□□□ -0.69
NECAP1-220ENST00000639841 EVX2Q03828 476 aa10.75□□□□□ -0.69
NECAP1-220ENST00000639841 ZNF579Q8NAF0 562 aaKnown RBP10.75□□□□□ -0.69
NECAP1-220ENST00000639841 GRXCR2A6NFK2 248 aa10.74□□□□□ -0.69
NECAP1-220ENST00000639841 CANXP27824 592 aaKnown RBP10.74□□□□□ -0.69
NECAP1-220ENST00000639841 MAP3K4Q9Y6R4 1608 aa10.74□□□□□ -0.69
NECAP1-220ENST00000639841 ASXL2Q76L83 1435 aa10.74□□□□□ -0.69
NECAP1-220ENST00000639841 UACAQ9BZF9 1416 aa10.74□□□□□ -0.69
NECAP1-220ENST00000639841 FCHSD2O94868 740 aa10.74□□□□□ -0.69
NECAP1-220ENST00000639841 CARMIL1Q5VZK9 1371 aa10.73□□□□□ -0.69
NECAP1-220ENST00000639841 KDM5BQ9UGL1 1544 aa10.73□□□□□ -0.69
NECAP1-220ENST00000639841 VRTNQ9H8Y1 702 aa10.73□□□□□ -0.69
NECAP1-220ENST00000639841 ATP1B4Q9UN42 357 aaPredicted RBP10.73□□□□□ -0.69
NECAP1-220ENST00000639841 KDM4FA0A1W2PPD8 638 aa10.72□□□□□ -0.69
NECAP1-220ENST00000639841 OSBPP22059 807 aa10.72□□□□□ -0.69
NECAP1-220ENST00000639841 ADAMTS19Q8TE59 1207 aa10.72□□□□□ -0.69
NECAP1-220ENST00000639841 PPRC1Q5VV67 1664 aaKnown RBP10.72□□□□□ -0.69
NECAP1-220ENST00000639841 UGGT2Q9NYU1 1516 aa10.72□□□□□ -0.69
NECAP1-220ENST00000639841 TMEM88BA6NKF7 163 aa10.72□□□□□ -0.69
NECAP1-220ENST00000639841 TSPYL2Q9H2G4 693 aaPredicted RBP10.71□□□□□ -0.69
NECAP1-220ENST00000639841 GNEQ9Y223 722 aaKnown RBP10.71□□□□□ -0.69
NECAP1-220ENST00000639841 PRR29P0C7W0 189 aa10.7□□□□□ -0.7
NECAP1-220ENST00000639841 ABL2P42684 1182 aa10.7□□□□□ -0.7
NECAP1-220ENST00000639841 DRC1Q96MC2 740 aa10.7□□□□□ -0.7
NECAP1-220ENST00000639841 ADGRL1O94910 1474 aa10.7□□□□□ -0.7
NECAP1-220ENST00000639841 EPRSP07814 1512 aaKnown RBP10.7□□□□□ -0.7
NECAP1-220ENST00000639841 MYSM1Q5VVJ2 828 aa10.7□□□□□ -0.7
NECAP1-220ENST00000639841 AKT1S1Q96B36 256 aa10.7□□□□□ -0.7
NECAP1-220ENST00000639841 BEGAINQ9BUH8 593 aa10.7□□□□□ -0.7
NECAP1-220ENST00000639841 SSTR3P32745 418 aaPredicted RBP10.69□□□□□ -0.7
NECAP1-220ENST00000639841 DNAJC14Q6Y2X3 702 aaPredicted RBP10.69□□□□□ -0.7
NECAP1-220ENST00000639841 UBE2Q2Q8WVN8 375 aa10.69□□□□□ -0.7
NECAP1-220ENST00000639841 GOLGA3Q08378 1498 aa10.69□□□□□ -0.7
NECAP1-220ENST00000639841 SPDYE1Q8NFV5 336 aaPredicted RBP10.68□□□□□ -0.7
NECAP1-220ENST00000639841 GPHNQ9NQX3 736 aaPredicted RBP10.68□□□□□ -0.7
NECAP1-220ENST00000639841 CFAP43Q8NDM7 1665 aa10.68□□□□□ -0.7
NECAP1-220ENST00000639841 FAM9AQ8IZU1 332 aaPredicted RBP10.68□□□□□ -0.7
NECAP1-220ENST00000639841 ZCCHC11Q5TAX3 1644 aaKnown RBP10.67□□□□□ -0.7
NECAP1-220ENST00000639841 TCF3P15923 654 aa10.67□□□□□ -0.7
NECAP1-220ENST00000639841 NOM1Q5C9Z4 860 aaKnown RBP10.67□□□□□ -0.7
NECAP1-220ENST00000639841 SREK1Q8WXA9 508 aaKnown RBP10.67□□□□□ -0.7
NECAP1-220ENST00000639841 TBC1D2BQ9UPU7 963 aa10.67□□□□□ -0.7
NECAP1-220ENST00000639841 KIAA0556O60303 1618 aa10.67□□□□□ -0.7
NECAP1-220ENST00000639841 CLCN1P35523 988 aa10.66□□□□□ -0.7
NECAP1-220ENST00000639841 GPCPD1Q9NPB8 672 aa10.66□□□□□ -0.7
NECAP1-220ENST00000639841 RAPGEF2Q9Y4G8 1499 aa10.66□□□□□ -0.7
NECAP1-220ENST00000639841 MAGI3Q5TCQ9 1506 aa10.66□□□□□ -0.7
NECAP1-220ENST00000639841 DISP1Q96F81 1524 aa10.66□□□□□ -0.7
NECAP1-220ENST00000639841 WDR7Q9Y4E6 1490 aa10.66□□□□□ -0.7
NECAP1-220ENST00000639841 ZNF16P17020 682 aaPredicted RBP10.66□□□□□ -0.7
NECAP1-220ENST00000639841 MDM2Q00987 491 aaPredicted RBP10.66□□□□□ -0.7
NECAP1-220ENST00000639841 WWC1Q8IX03 1113 aa10.66□□□□□ -0.7
NECAP1-220ENST00000639841 PHOX2BQ99453 314 aa10.66□□□□□ -0.7
NECAP1-220ENST00000639841 CERS3Q8IU89 383 aa10.65□□□□□ -0.7
NECAP1-220ENST00000639841 C8orf37Q96NL8 207 aa10.65□□□□□ -0.7
NECAP1-220ENST00000639841 CLK2P49760 499 aaKnown RBP10.65□□□□□ -0.71
NECAP1-220ENST00000639841 PTGDRQ13258 359 aa10.65□□□□□ -0.71
NECAP1-220ENST00000639841 HDGFL1Q5TGJ6 251 aa10.65□□□□□ -0.71
NECAP1-220ENST00000639841 PHLDB1Q86UU1 1377 aa10.64□□□□□ -0.71
NECAP1-220ENST00000639841 PRIM1P49642 420 aaKnown RBP10.64□□□□□ -0.71
NECAP1-220ENST00000639841 FXR2P51116 673 aaKnown RBP eCLIP10.64□□□□□ -0.71
NECAP1-220ENST00000639841 CTTNBP2Q8WZ74 1663 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms