RNA–Protein interactions for RNA: ENST00000639603.1

STRADA-238, Transcript of STE20-related kinase adaptor alpha, human

TSL 5

Gene STRADA, Length 535 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
STRADA-238	ENST00000639603	COL16A1	Q07092	1604 aa	Predicted RBP	12.01	□□□□□ -0.49
STRADA-238	ENST00000639603	SHPRH	Q149N8	1683 aa		12.01	□□□□□ -0.49
STRADA-238	ENST00000639603	LMTK2	Q8IWU2	1503 aa		12.01	□□□□□ -0.49
STRADA-238	ENST00000639603	GCC2	Q8IWJ2	1684 aa		12	□□□□□ -0.49
STRADA-238	ENST00000639603	KCNA6	P17658	529 aa		11.99	□□□□□ -0.49
STRADA-238	ENST00000639603	KANK1	Q14678	1352 aa		11.99	□□□□□ -0.49
STRADA-238	ENST00000639603	KIF15	Q9NS87	1388 aa		11.99	□□□□□ -0.49
STRADA-238	ENST00000639603	PTPN23	Q9H3S7	1636 aa		11.98	□□□□□ -0.49
STRADA-238	ENST00000639603	MSH6	P52701	1360 aa		11.98	□□□□□ -0.49
STRADA-238	ENST00000639603	JCAD	Q9P266	1359 aa		11.98	□□□□□ -0.49
STRADA-238	ENST00000639603	STAG3	Q9UJ98	1225 aa		11.98	□□□□□ -0.49
STRADA-238	ENST00000639603	FGD6	Q6ZV73	1430 aa		11.96	□□□□□ -0.49
STRADA-238	ENST00000639603	VPS8	Q8N3P4	1428 aa		11.96	□□□□□ -0.49
STRADA-238	ENST00000639603	MYCN	P04198	464 aa	Predicted RBP	11.96	□□□□□ -0.49
STRADA-238	ENST00000639603	AHDC1	Q5TGY3	1603 aa	Predicted RBP	11.96	□□□□□ -0.5
STRADA-238	ENST00000639603	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	11.95	□□□□□ -0.5
STRADA-238	ENST00000639603	PROSER2	Q86WR7	435 aa	Predicted RBP	11.95	□□□□□ -0.5
STRADA-238	ENST00000639603	DIP2A	Q14689	1571 aa		11.94	□□□□□ -0.5
STRADA-238	ENST00000639603	RPRD2	Q5VT52	1461 aa	Known RBP	11.94	□□□□□ -0.5
STRADA-238	ENST00000639603	NOS1	P29475	1434 aa		11.94	□□□□□ -0.5
STRADA-238	ENST00000639603	NCOA3	Q9Y6Q9	1424 aa		11.94	□□□□□ -0.5
STRADA-238	ENST00000639603	SPATA31A6	Q5VVP1	1343 aa		11.92	□□□□□ -0.5
STRADA-238	ENST00000639603	TMEM131L	A2VDJ0	1609 aa		11.92	□□□□□ -0.5
STRADA-238	ENST00000639603	DAPK1	P53355	1430 aa		11.92	□□□□□ -0.5
STRADA-238	ENST00000639603	CDK12	Q9NYV4	1490 aa	Predicted RBP	11.91	□□□□□ -0.5
STRADA-238	ENST00000639603	LRP6	O75581	1613 aa		11.91	□□□□□ -0.5
STRADA-238	ENST00000639603	ZNF772	Q68DY9	489 aa	Predicted RBP	11.91	□□□□□ -0.5
STRADA-238	ENST00000639603	SLC26A8	Q96RN1	970 aa		11.91	□□□□□ -0.5
STRADA-238	ENST00000639603	SLAIN2	Q9P270	581 aa		11.91	□□□□□ -0.5
STRADA-238	ENST00000639603		U3KPZ7	1027 aa	Predicted RBP	11.91	□□□□□ -0.5
STRADA-238	ENST00000639603	ABCC5	O15440	1437 aa		11.91	□□□□□ -0.5
STRADA-238	ENST00000639603	PLEKHG1	Q9ULL1	1385 aa		11.91	□□□□□ -0.5
STRADA-238	ENST00000639603	ZFYVE9	O95405	1425 aa		11.9	□□□□□ -0.5
STRADA-238	ENST00000639603	IDI1	Q13907	227 aa		11.9	□□□□□ -0.5
STRADA-238	ENST00000639603	SLC52A1	Q9NWF4	448 aa		11.89	□□□□□ -0.51
STRADA-238	ENST00000639603	ANKRD30A	Q9BXX3	1397 aa		11.89	□□□□□ -0.51
STRADA-238	ENST00000639603	NHSL1	Q5SYE7	1610 aa		11.89	□□□□□ -0.51
STRADA-238	ENST00000639603	MEX3C	Q5U5Q3	659 aa	Known RBP	11.88	□□□□□ -0.51
STRADA-238	ENST00000639603	RRP7BP	Q9NSQ0	103 aa		11.88	□□□□□ -0.51
STRADA-238	ENST00000639603	UPF1	Q92900	1129 aa	Known RBP eCLIP	11.87	□□□□□ -0.51
STRADA-238	ENST00000639603	RBM33	Q96EV2	1170 aa	Known RBP	11.87	□□□□□ -0.51
STRADA-238	ENST00000639603	BCAN	Q96GW7	911 aa		11.87	□□□□□ -0.51
STRADA-238	ENST00000639603	RNF39	Q9H2S5	420 aa		11.87	□□□□□ -0.51
STRADA-238	ENST00000639603	TRPM2	O94759	1503 aa		11.86	□□□□□ -0.51
STRADA-238	ENST00000639603	HDGF	P51858	240 aa	Known RBP	11.86	□□□□□ -0.51
STRADA-238	ENST00000639603	ADGRL2	O95490	1459 aa		11.86	□□□□□ -0.51
STRADA-238	ENST00000639603	UNC13B	O14795	1591 aa		11.86	□□□□□ -0.51
STRADA-238	ENST00000639603	RIMS2	Q9UQ26	1411 aa		11.86	□□□□□ -0.51
STRADA-238	ENST00000639603	PIK3R4	Q99570	1358 aa		11.85	□□□□□ -0.51
STRADA-238	ENST00000639603	KANK4	Q5T7N3	995 aa	Predicted RBP	11.85	□□□□□ -0.51
STRADA-238	ENST00000639603	DCC	P43146	1447 aa		11.85	□□□□□ -0.51
STRADA-238	ENST00000639603		E9PCH4	1651 aa		11.84	□□□□□ -0.51
STRADA-238	ENST00000639603	XRN1	Q8IZH2	1706 aa	Known RBP	11.84	□□□□□ -0.51
STRADA-238	ENST00000639603	PPP1R15A	O75807	674 aa	Predicted RBP	11.84	□□□□□ -0.51
STRADA-238	ENST00000639603	CADPS2	Q86UW7	1296 aa		11.84	□□□□□ -0.51
STRADA-238	ENST00000639603	IQGAP3	Q86VI3	1631 aa		11.83	□□□□□ -0.52
STRADA-238	ENST00000639603	TRIM52	Q96A61	297 aa		11.83	□□□□□ -0.52
STRADA-238	ENST00000639603	TBX22	Q9Y458	520 aa		11.83	□□□□□ -0.52
STRADA-238	ENST00000639603	ASXL1	Q8IXJ9	1541 aa		11.82	□□□□□ -0.52
STRADA-238	ENST00000639603	RXRB	P28702	533 aa		11.82	□□□□□ -0.52
STRADA-238	ENST00000639603	C14orf37	Q86TY3	774 aa		11.82	□□□□□ -0.52
STRADA-238	ENST00000639603	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	11.82	□□□□□ -0.52
STRADA-238	ENST00000639603	ATXN8OS	P0DMR3	200 aa		11.81	□□□□□ -0.52
STRADA-238	ENST00000639603	ATF3	P18847	181 aa		11.81	□□□□□ -0.52
STRADA-238	ENST00000639603	C19orf44	Q9H6X5	657 aa		11.81	□□□□□ -0.52
STRADA-238	ENST00000639603	ADAMTS13	Q76LX8	1427 aa		11.8	□□□□□ -0.52
STRADA-238	ENST00000639603	NALCN	Q8IZF0	1738 aa		11.8	□□□□□ -0.52
STRADA-238	ENST00000639603	NRXN3	Q9Y4C0	1643 aa		11.79	□□□□□ -0.52
STRADA-238	ENST00000639603	SETD5	Q9C0A6	1442 aa		11.79	□□□□□ -0.52
STRADA-238	ENST00000639603	SAMD1	Q6SPF0	538 aa	Predicted RBP	11.79	□□□□□ -0.52
STRADA-238	ENST00000639603	SPHKAP	Q2M3C7	1700 aa		11.79	□□□□□ -0.52
STRADA-238	ENST00000639603	LAMC1	P11047	1609 aa		11.78	□□□□□ -0.52
STRADA-238	ENST00000639603	ANKRD50	Q9ULJ7	1429 aa		11.78	□□□□□ -0.52
STRADA-238	ENST00000639603	SETBP1	Q9Y6X0	1596 aa		11.78	□□□□□ -0.52
STRADA-238	ENST00000639603	RGS12	O14924	1447 aa		11.77	□□□□□ -0.52
STRADA-238	ENST00000639603	APLP2	Q06481	763 aa		11.77	□□□□□ -0.53
STRADA-238	ENST00000639603	CHIC2	Q9UKJ5	165 aa		11.77	□□□□□ -0.53
STRADA-238	ENST00000639603	AFF2	P51816	1311 aa		11.77	□□□□□ -0.53
STRADA-238	ENST00000639603	MARF1	Q9Y4F3	1742 aa	Known RBP	11.77	□□□□□ -0.53
STRADA-238	ENST00000639603	BRINP3	Q76B58	766 aa		11.76	□□□□□ -0.53
STRADA-238	ENST00000639603	C1QBP	Q07021	282 aa	Known RBP	11.75	□□□□□ -0.53
STRADA-238	ENST00000639603	MST1R	Q04912	1400 aa		11.75	□□□□□ -0.53
STRADA-238	ENST00000639603	NUTM2B	A6NNL0	878 aa	Predicted RBP	11.74	□□□□□ -0.53
STRADA-238	ENST00000639603	NUTM2E	B1AL46	878 aa	Predicted RBP	11.74	□□□□□ -0.53
STRADA-238	ENST00000639603	NUTM2A	Q8IVF1	878 aa	Predicted RBP	11.74	□□□□□ -0.53
STRADA-238	ENST00000639603	KIF1B	O60333	1816 aa		11.74	□□□□□ -0.53
STRADA-238	ENST00000639603	RBM6	P78332	1123 aa	Known RBP	11.73	□□□□□ -0.53
STRADA-238	ENST00000639603	PTPRU	Q92729	1446 aa		11.73	□□□□□ -0.53
STRADA-238	ENST00000639603	LRRC59	Q96AG4	307 aa	Known RBP	11.73	□□□□□ -0.53
STRADA-238	ENST00000639603	COL22A1	Q8NFW1	1626 aa	Predicted RBP	11.72	□□□□□ -0.53
STRADA-238	ENST00000639603	ADGRL3	Q9HAR2	1447 aa		11.72	□□□□□ -0.53
STRADA-238	ENST00000639603	ATAD2	Q6PL18	1390 aa		11.72	□□□□□ -0.53
STRADA-238	ENST00000639603	PNPLA6	Q8IY17	1366 aa		11.72	□□□□□ -0.53
STRADA-238	ENST00000639603	CHGA	P10645	457 aa	Known RBP	11.72	□□□□□ -0.53
STRADA-238	ENST00000639603	AMOTL2	Q9Y2J4	779 aa		11.72	□□□□□ -0.53
STRADA-238	ENST00000639603	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	11.71	□□□□□ -0.54
STRADA-238	ENST00000639603	NGLY1	Q96IV0	654 aa		11.7	□□□□□ -0.54
STRADA-238	ENST00000639603	C8orf37	Q96NL8	207 aa		11.7	□□□□□ -0.54
STRADA-238	ENST00000639603	NUTM2D	Q5VT03	806 aa	Predicted RBP	11.69	□□□□□ -0.54
STRADA-238	ENST00000639603	QTRT2	Q9H974	415 aa	Known RBP	11.69	□□□□□ -0.54

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