RNA–Protein interactions for RNA: ENST00000639169.1

GCSH-208, Transcript of glycine cleavage system protein H, humanhuman

TSL 2 BASIC

Gene GCSH, Length 2,537 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCSH-208ENST00000639169 SCAF11Q99590 1463 aaKnown RBP24.94■■□□□ 1.58
GCSH-208ENST00000639169 STAC3Q96MF2 364 aa24.93■■□□□ 1.58
GCSH-208ENST00000639169 KIF1BO60333 1816 aa24.93■■□□□ 1.58
GCSH-208ENST00000639169 DIP2CQ9Y2E4 1556 aa24.93■■□□□ 1.58
GCSH-208ENST00000639169 NUTM2DQ5VT03 806 aaPredicted RBP24.92■■□□□ 1.58
GCSH-208ENST00000639169 ABCC3O15438 1527 aa24.92■■□□□ 1.58
GCSH-208ENST00000639169 KTN1Q86UP2 1357 aaKnown RBP24.91■■□□□ 1.58
GCSH-208ENST00000639169 NOS1P29475 1434 aa24.91■■□□□ 1.58
GCSH-208ENST00000639169 RICTORQ6R327 1708 aa24.91■■□□□ 1.58
GCSH-208ENST00000639169 PARD3Q8TEW0 1356 aa24.91■■□□□ 1.58
GCSH-208ENST00000639169 SENP3Q9H4L4 574 aaPredicted RBP24.89■■□□□ 1.58
GCSH-208ENST00000639169 BRD4O60885 1362 aaPredicted RBP24.87■■□□□ 1.57
GCSH-208ENST00000639169 MYOM2P54296 1465 aa24.86■■□□□ 1.57
GCSH-208ENST00000639169 SIGLEC1Q9BZZ2 1709 aa24.86■■□□□ 1.57
GCSH-208ENST00000639169 NEURL4Q96JN8 1562 aa24.85■■□□□ 1.57
GCSH-208ENST00000639169 ADGRB3O60242 1522 aa24.85■■□□□ 1.57
GCSH-208ENST00000639169 TSPOAP1O95153 1857 aa24.85■■□□□ 1.57
GCSH-208ENST00000639169 TMEM132EQ6IEE7 984 aa24.84■■□□□ 1.57
GCSH-208ENST00000639169 NLRP13Q86W25 1043 aa24.84■■□□□ 1.57
GCSH-208ENST00000639169 IFT172Q9UG01 1749 aa24.84■■□□□ 1.57
GCSH-208ENST00000639169 LRPPRCP42704 1394 aaKnown RBP24.83■■□□□ 1.56
GCSH-208ENST00000639169 SALL2Q9Y467 1007 aaPredicted RBP24.82■■□□□ 1.56
GCSH-208ENST00000639169 CAMSAP1Q5T5Y3 1602 aa24.82■■□□□ 1.56
GCSH-208ENST00000639169 GLI2P10070 1586 aa24.82■■□□□ 1.56
GCSH-208ENST00000639169 TRAK1Q9UPV9 953 aa24.8■■□□□ 1.56
GCSH-208ENST00000639169 NRXN1Q9ULB1 1477 aa24.8■■□□□ 1.56
GCSH-208ENST00000639169 KIAA1210Q9ULL0 1709 aa24.8■■□□□ 1.56
GCSH-208ENST00000639169 DIP2BQ9P265 1576 aa24.8■■□□□ 1.56
GCSH-208ENST00000639169 IDI1Q13907 227 aa24.79■■□□□ 1.56
GCSH-208ENST00000639169 EIF3AQ14152 1382 aaKnown RBP24.78■■□□□ 1.56
GCSH-208ENST00000639169 SYNMO15061 1565 aa24.78■■□□□ 1.56
GCSH-208ENST00000639169 KNSTRNQ9Y448 316 aa24.77■■□□□ 1.56
GCSH-208ENST00000639169 FBXO31Q5XUX0 539 aaPredicted RBP24.76■■□□□ 1.55
GCSH-208ENST00000639169 C14orf93Q9H972 538 aaKnown RBP24.76■■□□□ 1.55
GCSH-208ENST00000639169 AMER1Q5JTC6 1135 aaPredicted RBP24.75■■□□□ 1.55
GCSH-208ENST00000639169 PIK3C2GO75747 1445 aa24.75■■□□□ 1.55
GCSH-208ENST00000639169 CDCA8Q53HL2 280 aa24.74■■□□□ 1.55
GCSH-208ENST00000639169 PPLO60437 1756 aa24.74■■□□□ 1.55
GCSH-208ENST00000639169 ERVK-7P63135 1459 aa24.74■■□□□ 1.55
GCSH-208ENST00000639169 TSHZ2Q9NRE2 1034 aa24.73■■□□□ 1.55
GCSH-208ENST00000639169 SMG6Q86US8 1419 aaKnown RBP24.71■■□□□ 1.55
GCSH-208ENST00000639169 MYOM1P52179 1685 aa24.71■■□□□ 1.55
GCSH-208ENST00000639169 NUDCQ9Y266 331 aa24.7■■□□□ 1.54
GCSH-208ENST00000639169 CENPJQ9HC77 1338 aaPredicted RBP24.69■■□□□ 1.54
GCSH-208ENST00000639169 CARD14Q9BXL6 1004 aa24.69■■□□□ 1.54
GCSH-208ENST00000639169 PPP2R1AP30153 589 aa24.68■■□□□ 1.54
GCSH-208ENST00000639169 PIK3C2BO00750 1634 aa24.68■■□□□ 1.54
GCSH-208ENST00000639169 RPGRIP1LQ68CZ1 1315 aa24.68■■□□□ 1.54
GCSH-208ENST00000639169 MLECQ14165 292 aa24.68■■□□□ 1.54
GCSH-208ENST00000639169 ARHGAP31Q2M1Z3 1444 aa24.67■■□□□ 1.54
GCSH-208ENST00000639169 ADGRB1O14514 1584 aa24.67■■□□□ 1.54
GCSH-208ENST00000639169 KDM5AP29375 1690 aaKnown RBP24.65■■□□□ 1.54
GCSH-208ENST00000639169 ZMYM4Q5VZL5 1548 aa24.64■■□□□ 1.54
GCSH-208ENST00000639169 VGFO15240 615 aaPredicted RBP24.64■■□□□ 1.54
GCSH-208ENST00000639169 NEXMIFQ5QGS0 1516 aa24.64■■□□□ 1.53
GCSH-208ENST00000639169 ADAMTS8Q9UP79 889 aa24.63■■□□□ 1.53
GCSH-208ENST00000639169 SAFB2Q14151 953 aaKnown RBP eCLIP24.63■■□□□ 1.53
GCSH-208ENST00000639169 SETBP1Q9Y6X0 1596 aa24.62■■□□□ 1.53
GCSH-208ENST00000639169 SLC52A1Q9NWF4 448 aa24.62■■□□□ 1.53
GCSH-208ENST00000639169 ASXL1Q8IXJ9 1541 aa24.61■■□□□ 1.53
GCSH-208ENST00000639169 SLC12A5Q9H2X9 1139 aa24.61■■□□□ 1.53
GCSH-208ENST00000639169 CDCA7LQ96GN5 454 aa24.61■■□□□ 1.53
GCSH-208ENST00000639169 STK26Q9P289 416 aa24.61■■□□□ 1.53
GCSH-208ENST00000639169 MYO5BQ9ULV0 1848 aa24.61■■□□□ 1.53
GCSH-208ENST00000639169 ZC3H13Q5T200 1668 aaKnown RBP24.6■■□□□ 1.53
GCSH-208ENST00000639169 PREX1Q8TCU6 1659 aa24.58■■□□□ 1.53
GCSH-208ENST00000639169 MYO3AQ8NEV4 1616 aa24.58■■□□□ 1.53
GCSH-208ENST00000639169 B4GALNT3Q6L9W6 998 aa24.58■■□□□ 1.52
GCSH-208ENST00000639169 SBNO2Q9Y2G9 1366 aa24.56■■□□□ 1.52
GCSH-208ENST00000639169 QRICH2Q9H0J4 1663 aa24.55■■□□□ 1.52
GCSH-208ENST00000639169 PPP4R2Q9NY27 417 aa24.55■■□□□ 1.52
GCSH-208ENST00000639169 SLC24A1O60721 1099 aa24.54■■□□□ 1.52
GCSH-208ENST00000639169 TMEM131LA2VDJ0 1609 aa24.53■■□□□ 1.52
GCSH-208ENST00000639169 BLMP54132 1417 aaPredicted RBP24.52■■□□□ 1.52
GCSH-208ENST00000639169 KIF13AQ9H1H9 1805 aa24.51■■□□□ 1.51
GCSH-208ENST00000639169 RNF123Q5XPI4 1314 aa24.51■■□□□ 1.51
GCSH-208ENST00000639169 STAG3Q9UJ98 1225 aa24.51■■□□□ 1.51
GCSH-208ENST00000639169 CABP2Q9NPB3 220 aa24.51■■□□□ 1.51
GCSH-208ENST00000639169 TNNT2P45379 298 aaPredicted RBP24.5■■□□□ 1.51
GCSH-208ENST00000639169 NPC1L1Q9UHC9 1359 aa24.49■■□□□ 1.51
GCSH-208ENST00000639169 WDR43Q15061 677 aaKnown RBP eCLIP24.49■■□□□ 1.51
GCSH-208ENST00000639169 ERICH6BQ5W0A0 696 aa24.49■■□□□ 1.51
GCSH-208ENST00000639169 CLTCQ00610 1675 aaKnown RBP24.48■■□□□ 1.51
GCSH-208ENST00000639169 CCDC146Q8IYE0 955 aa24.48■■□□□ 1.51
GCSH-208ENST00000639169 NSD3Q9BZ95 1437 aa24.47■■□□□ 1.51
GCSH-208ENST00000639169 ARHGEF28Q8N1W1 1705 aaKnown RBP24.46■■□□□ 1.51
GCSH-208ENST00000639169 ZFYVE9O95405 1425 aa24.45■■□□□ 1.5
GCSH-208ENST00000639169 AGLP35573 1532 aa24.45■■□□□ 1.5
GCSH-208ENST00000639169 TULP4Q9NRJ4 1543 aa24.44■■□□□ 1.5
GCSH-208ENST00000639169 EVC2Q86UK5 1308 aa24.43■■□□□ 1.5
GCSH-208ENST00000639169 RCAN3Q9UKA8 241 aa24.43■■□□□ 1.5
GCSH-208ENST00000639169 MINK1Q8N4C8 1332 aaPredicted RBP24.43■■□□□ 1.5
GCSH-208ENST00000639169 PRAM1Q96QH2 718 aa24.42■■□□□ 1.5
GCSH-208ENST00000639169 PLEKHH1Q9ULM0 1364 aa24.42■■□□□ 1.5
GCSH-208ENST00000639169 REREQ9P2R6 1566 aa24.42■■□□□ 1.5
GCSH-208ENST00000639169 PDE3BQ13370 1112 aa24.41■■□□□ 1.5
GCSH-208ENST00000639169 INSRP06213 1382 aa24.39■■□□□ 1.5
GCSH-208ENST00000639169 MORC1Q86VD1 984 aa24.39■■□□□ 1.5
GCSH-208ENST00000639169 PPP6R1Q9UPN7 881 aa24.39■■□□□ 1.49
GCSH-208ENST00000639169 SRPK2P78362 688 aaKnown RBP24.38■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms