RNA–Protein interactions for RNA: ENST00000639145.1

SCARB2-215, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 4,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-215ENST00000639145 BIVM-ERCC5R4GMW8 1640 aa17.18■□□□□ 0.34
SCARB2-215ENST00000639145 DAPK1P53355 1430 aa17.17■□□□□ 0.34
SCARB2-215ENST00000639145 ANKLE2Q86XL3 938 aa17.17■□□□□ 0.34
SCARB2-215ENST00000639145 RAPGEF4Q8WZA2 1011 aa17.16■□□□□ 0.34
SCARB2-215ENST00000639145 HFM1A2PYH4 1435 aa17.16■□□□□ 0.34
SCARB2-215ENST00000639145 CEBPAP49715 358 aaPredicted RBP17.16■□□□□ 0.34
SCARB2-215ENST00000639145 MTHFSP49914 203 aa17.16■□□□□ 0.34
SCARB2-215ENST00000639145 TTC5Q8N0Z6 440 aa17.16■□□□□ 0.34
SCARB2-215ENST00000639145 KIAA1107Q9UPP5 1409 aa17.16■□□□□ 0.34
SCARB2-215ENST00000639145 MSH5O43196 834 aa17.15■□□□□ 0.34
SCARB2-215ENST00000639145 SPRYD3Q8NCJ5 442 aa17.15■□□□□ 0.34
SCARB2-215ENST00000639145 HMMRO75330 724 aa17.15■□□□□ 0.34
SCARB2-215ENST00000639145 KIAA1211Q6ZU35 1233 aa17.14■□□□□ 0.33
SCARB2-215ENST00000639145 C11orf95C9JLR9 678 aaPredicted RBP17.14■□□□□ 0.33
SCARB2-215ENST00000639145 TMX4Q9H1E5 349 aaPredicted RBP17.14■□□□□ 0.33
SCARB2-215ENST00000639145 CABP1Q9NZU7 370 aa17.13■□□□□ 0.33
SCARB2-215ENST00000639145 ZRSR1Q15695 479 aaKnown RBP17.13■□□□□ 0.33
SCARB2-215ENST00000639145 HDAC5Q9UQL6 1122 aa17.13■□□□□ 0.33
SCARB2-215ENST00000639145 PTPRKQ15262 1439 aa17.13■□□□□ 0.33
SCARB2-215ENST00000639145 E9PSI1 815 aa17.12■□□□□ 0.33
SCARB2-215ENST00000639145 FBXO31Q5XUX0 539 aaPredicted RBP17.12■□□□□ 0.33
SCARB2-215ENST00000639145 TRIM6-TRIM34B2RNG4 842 aa17.11■□□□□ 0.33
SCARB2-215ENST00000639145 CDK19Q9BWU1 502 aa17.11■□□□□ 0.33
SCARB2-215ENST00000639145 GPRASP1Q5JY77 1395 aa17.11■□□□□ 0.33
SCARB2-215ENST00000639145 MCCP23508 829 aa17.11■□□□□ 0.33
SCARB2-215ENST00000639145 POGZQ7Z3K3 1410 aa17.11■□□□□ 0.33
SCARB2-215ENST00000639145 ABCC5O15440 1437 aa17.1■□□□□ 0.33
SCARB2-215ENST00000639145 RBM33Q96EV2 1170 aaKnown RBP17.1■□□□□ 0.33
SCARB2-215ENST00000639145 COG6Q9Y2V7 657 aa17.1■□□□□ 0.33
SCARB2-215ENST00000639145 THOC2Q8NI27 1593 aaKnown RBP17.09■□□□□ 0.33
SCARB2-215ENST00000639145 FRAT2O75474 233 aaPredicted RBP17.09■□□□□ 0.33
SCARB2-215ENST00000639145 XPCQ01831 940 aaPredicted RBP17.09■□□□□ 0.33
SCARB2-215ENST00000639145 ADGRL1O94910 1474 aa17.08■□□□□ 0.33
SCARB2-215ENST00000639145 HSCBQ8IWL3 235 aa17.08■□□□□ 0.32
SCARB2-215ENST00000639145 ERBINQ96RT1 1412 aa17.08■□□□□ 0.32
SCARB2-215ENST00000639145 WDR97A6NE52 1622 aa17.08■□□□□ 0.32
SCARB2-215ENST00000639145 RUNDC1Q96C34 613 aa17.08■□□□□ 0.32
SCARB2-215ENST00000639145 STRN4Q9NRL3 753 aa17.08■□□□□ 0.32
SCARB2-215ENST00000639145 ZKSCAN2Q63HK3 967 aa17.07■□□□□ 0.32
SCARB2-215ENST00000639145 G3V3G9 751 aa17.07■□□□□ 0.32
SCARB2-215ENST00000639145 DCAF8Q5TAQ9 597 aa17.07■□□□□ 0.32
SCARB2-215ENST00000639145 ADAMTS8Q9UP79 889 aa17.06■□□□□ 0.32
SCARB2-215ENST00000639145 CCDC141Q6ZP82 1450 aa17.06■□□□□ 0.32
SCARB2-215ENST00000639145 TSPYL4Q9UJ04 414 aa17.06■□□□□ 0.32
SCARB2-215ENST00000639145 CUL7Q14999 1698 aa17.05■□□□□ 0.32
SCARB2-215ENST00000639145 KIF21AQ7Z4S6 1674 aa17.05■□□□□ 0.32
SCARB2-215ENST00000639145 SUPT6HQ7KZ85 1726 aaKnown RBP17.05■□□□□ 0.32
SCARB2-215ENST00000639145 NEXNQ0ZGT2 675 aa17.05■□□□□ 0.32
SCARB2-215ENST00000639145 FKBP5Q13451 457 aaPredicted RBP17.05■□□□□ 0.32
SCARB2-215ENST00000639145 IDI1Q13907 227 aa17.05■□□□□ 0.32
SCARB2-215ENST00000639145 NUTM2BA6NNL0 878 aaPredicted RBP17.04■□□□□ 0.32
SCARB2-215ENST00000639145 NUTM2EB1AL46 878 aaPredicted RBP17.04■□□□□ 0.32
SCARB2-215ENST00000639145 NUTM2AQ8IVF1 878 aaPredicted RBP17.04■□□□□ 0.32
SCARB2-215ENST00000639145 WAPLQ7Z5K2 1190 aa17.04■□□□□ 0.32
SCARB2-215ENST00000639145 C9orf78Q9NZ63 289 aaPredicted RBP17.04■□□□□ 0.32
SCARB2-215ENST00000639145 CDK11BP21127 795 aaKnown RBP17.04■□□□□ 0.32
SCARB2-215ENST00000639145 MFAP1P55081 439 aaKnown RBP17.04■□□□□ 0.32
SCARB2-215ENST00000639145 ZBED9Q6R2W3 1325 aa17.03■□□□□ 0.32
SCARB2-215ENST00000639145 ERICH6BQ5W0A0 696 aa17.03■□□□□ 0.32
SCARB2-215ENST00000639145 PIP4K2BP78356 416 aa17.03■□□□□ 0.32
SCARB2-215ENST00000639145 PLCB2Q00722 1185 aa17.02■□□□□ 0.32
SCARB2-215ENST00000639145 EXOC6Q8TAG9 804 aa17.02■□□□□ 0.32
SCARB2-215ENST00000639145 GPATCH3Q96I76 525 aa17.02■□□□□ 0.32
SCARB2-215ENST00000639145 TCP11L2Q8N4U5 519 aa17.02■□□□□ 0.31
SCARB2-215ENST00000639145 PRKAR2BP31323 418 aa17.02■□□□□ 0.31
SCARB2-215ENST00000639145 CAMSAP2Q08AD1 1489 aa17.01■□□□□ 0.31
SCARB2-215ENST00000639145 ANKRD30BQ9BXX2 1392 aa17.01■□□□□ 0.31
SCARB2-215ENST00000639145 GOLGA6L4A6NEF3 574 aa17.01■□□□□ 0.31
SCARB2-215ENST00000639145 PPP2R1AP30153 589 aa17.01■□□□□ 0.31
SCARB2-215ENST00000639145 AIMP1Q12904 312 aaKnown RBP17■□□□□ 0.31
SCARB2-215ENST00000639145 ANKRD45Q5TZF3 282 aa17■□□□□ 0.31
SCARB2-215ENST00000639145 RPGRIP1LQ68CZ1 1315 aa17■□□□□ 0.31
SCARB2-215ENST00000639145 ANP32EQ9BTT0 268 aa17■□□□□ 0.31
SCARB2-215ENST00000639145 CFAP44Q96MT7 982 aa17■□□□□ 0.31
SCARB2-215ENST00000639145 CRBNQ96SW2 442 aa17■□□□□ 0.31
SCARB2-215ENST00000639145 ATP10BO94823 1461 aa17■□□□□ 0.31
SCARB2-215ENST00000639145 RTEL1-TNFRSF6BF6WH68 1400 aa17■□□□□ 0.31
SCARB2-215ENST00000639145 CNTLNQ9NXG0 1405 aa16.99■□□□□ 0.31
SCARB2-215ENST00000639145 GNAI1P63096 354 aa16.99■□□□□ 0.31
SCARB2-215ENST00000639145 NOP58Q9Y2X3 529 aaKnown RBP16.99■□□□□ 0.31
SCARB2-215ENST00000639145 CDCA7LQ96GN5 454 aa16.99■□□□□ 0.31
SCARB2-215ENST00000639145 RRP1P56182 461 aaKnown RBP16.98■□□□□ 0.31
SCARB2-215ENST00000639145 NCOA1Q15788 1441 aa16.98■□□□□ 0.31
SCARB2-215ENST00000639145 ROCK1Q13464 1354 aa16.98■□□□□ 0.31
SCARB2-215ENST00000639145 SULT6B1Q6IMI4 303 aa16.98■□□□□ 0.31
SCARB2-215ENST00000639145 ZNF692Q9BU19 519 aaPredicted RBP16.98■□□□□ 0.31
SCARB2-215ENST00000639145 FANCAO15360 1455 aa16.98■□□□□ 0.31
SCARB2-215ENST00000639145 NUP153P49790 1475 aaKnown RBP16.98■□□□□ 0.31
SCARB2-215ENST00000639145 PRDM11Q9NQV5 511 aa16.98■□□□□ 0.31
SCARB2-215ENST00000639145 ZC3H6P61129 1189 aaKnown RBP16.97■□□□□ 0.31
SCARB2-215ENST00000639145 PHF23Q9BUL5 403 aaPredicted RBP16.97■□□□□ 0.31
SCARB2-215ENST00000639145 TOMM22Q9NS69 142 aa16.97■□□□□ 0.31
SCARB2-215ENST00000639145 CCDC61Q9Y6R9 512 aa16.97■□□□□ 0.31
SCARB2-215ENST00000639145 SLKQ9H2G2 1235 aaPredicted RBP16.97■□□□□ 0.31
SCARB2-215ENST00000639145 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.96■□□□□ 0.31
SCARB2-215ENST00000639145 NOL8Q76FK4 1167 aaKnown RBP16.96■□□□□ 0.31
SCARB2-215ENST00000639145 PTPN23Q9H3S7 1636 aa16.96■□□□□ 0.31
SCARB2-215ENST00000639145 RRS1Q15050 365 aaKnown RBP16.96■□□□□ 0.31
SCARB2-215ENST00000639145 DDX58O95786 925 aaKnown RBP16.96■□□□□ 0.3
SCARB2-215ENST00000639145 PTMAP06454 111 aaKnown RBP16.96■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms