RNA–Protein interactions for RNA: ENST00000639128.1

RTTN-214, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 4,547 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-214ENST00000639128 IVLP07476 585 aa6.52□□□□□ -1.37
RTTN-214ENST00000639128 FMNL3Q8IVF7 1028 aa6.52□□□□□ -1.37
RTTN-214ENST00000639128 IFT57Q9NWB7 429 aa6.52□□□□□ -1.37
RTTN-214ENST00000639128 DDX46Q7L014 1031 aaKnown RBP6.52□□□□□ -1.37
RTTN-214ENST00000639128 ITPRIPQ8IWB1 547 aa6.52□□□□□ -1.37
RTTN-214ENST00000639128 TXLNBQ8N3L3 684 aa6.52□□□□□ -1.37
RTTN-214ENST00000639128 HOOK1Q9UJC3 728 aaKnown RBP6.52□□□□□ -1.37
RTTN-214ENST00000639128 KIF20AO95235 890 aa6.51□□□□□ -1.37
RTTN-214ENST00000639128 ZFYP08048 801 aaPredicted RBP6.51□□□□□ -1.37
RTTN-214ENST00000639128 BANK1Q8NDB2 785 aa6.51□□□□□ -1.37
RTTN-214ENST00000639128 DNAJC21Q5F1R6 531 aaKnown RBP6.51□□□□□ -1.37
RTTN-214ENST00000639128 IQCEQ6IPM2 695 aa6.51□□□□□ -1.37
RTTN-214ENST00000639128 CCDC112Q8NEF3 446 aa6.51□□□□□ -1.37
RTTN-214ENST00000639128 CHMP5Q9NZZ3 219 aa6.51□□□□□ -1.37
RTTN-214ENST00000639128 SATB2Q9UPW6 733 aa6.51□□□□□ -1.37
RTTN-214ENST00000639128 MCM3P25205 808 aa6.51□□□□□ -1.37
RTTN-214ENST00000639128 TICAM2Q86XR7 235 aa6.51□□□□□ -1.37
RTTN-214ENST00000639128 UIMC1Q96RL1 719 aa6.51□□□□□ -1.37
RTTN-214ENST00000639128 MAP3K7CLP57077 242 aa6.51□□□□□ -1.37
RTTN-214ENST00000639128 NBPF1Q3BBV0 1214 aa6.51□□□□□ -1.37
RTTN-214ENST00000639128 KLHL10Q6JEL2 608 aa6.51□□□□□ -1.37
RTTN-214ENST00000639128 CENPHQ9H3R5 247 aa6.51□□□□□ -1.37
RTTN-214ENST00000639128 PPP1R1BQ9UD71 204 aaPredicted RBP6.51□□□□□ -1.37
RTTN-214ENST00000639128 CCDC6Q16204 474 aa6.5□□□□□ -1.37
RTTN-214ENST00000639128 AP1ARQ63HQ0 302 aa6.5□□□□□ -1.37
RTTN-214ENST00000639128 TPD52L1Q16890 204 aaPredicted RBP6.5□□□□□ -1.37
RTTN-214ENST00000639128 B4GALNT3Q6L9W6 998 aa6.5□□□□□ -1.37
RTTN-214ENST00000639128 RWDD1Q9H446 243 aaPredicted RBP6.5□□□□□ -1.37
RTTN-214ENST00000639128 USH1CQ9Y6N9 552 aa6.5□□□□□ -1.37
RTTN-214ENST00000639128 CCDC47Q96A33 483 aaKnown RBP6.5□□□□□ -1.37
RTTN-214ENST00000639128 TNNT1P13805 278 aa6.49□□□□□ -1.37
RTTN-214ENST00000639128 CDCA8Q53HL2 280 aa6.49□□□□□ -1.37
RTTN-214ENST00000639128 CEP83Q9Y592 693 aa6.49□□□□□ -1.37
RTTN-214ENST00000639128 EIF4G2P78344 907 aaKnown RBP eCLIP6.49□□□□□ -1.37
RTTN-214ENST00000639128 CEP63Q96MT8 703 aa6.49□□□□□ -1.37
RTTN-214ENST00000639128 HDAC5Q9UQL6 1122 aa6.49□□□□□ -1.37
RTTN-214ENST00000639128 STAMBPO95630 424 aa6.49□□□□□ -1.37
RTTN-214ENST00000639128 NASPP49321 788 aaPredicted RBP6.49□□□□□ -1.37
RTTN-214ENST00000639128 NUTM1Q86Y26 1132 aa6.49□□□□□ -1.37
RTTN-214ENST00000639128 NUCB2P80303 420 aa6.49□□□□□ -1.37
RTTN-214ENST00000639128 CCAR1Q8IX12 1150 aaKnown RBP6.49□□□□□ -1.37
RTTN-214ENST00000639128 UQCRHLA0A096LP55 91 aa6.48□□□□□ -1.37
RTTN-214ENST00000639128 UQCRHP07919 91 aa6.48□□□□□ -1.37
RTTN-214ENST00000639128 DBN1Q16643 649 aa6.48□□□□□ -1.37
RTTN-214ENST00000639128 RBM33Q96EV2 1170 aaKnown RBP6.48□□□□□ -1.37
RTTN-214ENST00000639128 MYCBPQ99417 103 aaPredicted RBP6.48□□□□□ -1.37
RTTN-214ENST00000639128 BCL11BQ9C0K0 894 aaPredicted RBP6.48□□□□□ -1.37
RTTN-214ENST00000639128 RBBP5Q15291 538 aaKnown RBP6.48□□□□□ -1.37
RTTN-214ENST00000639128 MAP9Q49MG5 647 aa6.48□□□□□ -1.37
RTTN-214ENST00000639128 RSRC1Q96IZ7 334 aaKnown RBP6.48□□□□□ -1.37
RTTN-214ENST00000639128 NAT10Q9H0A0 1025 aaKnown RBP6.48□□□□□ -1.37
RTTN-214ENST00000639128 MBD3O95983 291 aa6.48□□□□□ -1.37
RTTN-214ENST00000639128 SF3A1Q15459 793 aaKnown RBP6.48□□□□□ -1.37
RTTN-214ENST00000639128 CHMP4AQ9BY43 222 aa6.48□□□□□ -1.37
RTTN-214ENST00000639128 TAOK2Q9UL54 1235 aa6.48□□□□□ -1.37
RTTN-214ENST00000639128 LIMCH1Q9UPQ0 1083 aa6.48□□□□□ -1.37
RTTN-214ENST00000639128 ESPNB1AK53 854 aa6.47□□□□□ -1.37
RTTN-214ENST00000639128 C6orf163Q5TEZ5 329 aa6.47□□□□□ -1.37
RTTN-214ENST00000639128 LRCH2Q5VUJ6 765 aa6.47□□□□□ -1.37
RTTN-214ENST00000639128 TMCO3Q6UWJ1 677 aa6.47□□□□□ -1.37
RTTN-214ENST00000639128 CDK5RAP3Q96JB5 506 aa6.47□□□□□ -1.37
RTTN-214ENST00000639128 LRRCC1Q9C099 1032 aa6.47□□□□□ -1.37
RTTN-214ENST00000639128 MAPK8IP3Q9UPT6 1336 aa6.47□□□□□ -1.37
RTTN-214ENST00000639128 ERC1Q8IUD2 1116 aa6.47□□□□□ -1.37
RTTN-214ENST00000639128 NUP133Q8WUM0 1156 aa6.47□□□□□ -1.37
RTTN-214ENST00000639128 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.47□□□□□ -1.37
RTTN-214ENST00000639128 HMGB3O15347 200 aaKnown RBP6.47□□□□□ -1.37
RTTN-214ENST00000639128 SMAP1Q8IYB5 467 aaPredicted RBP6.47□□□□□ -1.37
RTTN-214ENST00000639128 KIF5BP33176 963 aa6.46□□□□□ -1.37
RTTN-214ENST00000639128 GBP6Q6ZN66 633 aa6.46□□□□□ -1.37
RTTN-214ENST00000639128 PDCD7Q8N8D1 485 aaKnown RBP6.46□□□□□ -1.37
RTTN-214ENST00000639128 DNAI2Q9GZS0 605 aa6.46□□□□□ -1.37
RTTN-214ENST00000639128 LUC7LQ9NQ29 371 aaKnown RBP6.46□□□□□ -1.37
RTTN-214ENST00000639128 ANKRD18BA2A2Z9 1011 aa6.46□□□□□ -1.38
RTTN-214ENST00000639128 DYNC1I1O14576 645 aa6.46□□□□□ -1.38
RTTN-214ENST00000639128 MAPK8IP2Q13387 824 aaPredicted RBP6.46□□□□□ -1.38
RTTN-214ENST00000639128 SPECC1LQ69YQ0 1117 aa6.46□□□□□ -1.38
RTTN-214ENST00000639128 C10orf67Q8IYJ2 551 aa6.46□□□□□ -1.38
RTTN-214ENST00000639128 POTEB2H3BUK9 544 aa6.46□□□□□ -1.38
RTTN-214ENST00000639128 IPO8O15397 1037 aaKnown RBP6.46□□□□□ -1.38
RTTN-214ENST00000639128 SEPT7Q16181 437 aaKnown RBP6.46□□□□□ -1.38
RTTN-214ENST00000639128 SASS6Q6UVJ0 657 aa6.46□□□□□ -1.38
RTTN-214ENST00000639128 RASSF4Q9H2L5 321 aa6.46□□□□□ -1.38
RTTN-214ENST00000639128 CHMP2AO43633 222 aa6.46□□□□□ -1.38
RTTN-214ENST00000639128 NOL3O60936 208 aaKnown RBP6.46□□□□□ -1.38
RTTN-214ENST00000639128 RNF8O76064 485 aa6.46□□□□□ -1.38
RTTN-214ENST00000639128 BMS1Q14692 1282 aaKnown RBP6.46□□□□□ -1.38
RTTN-214ENST00000639128 TTC31Q49AM3 519 aaPredicted RBP6.46□□□□□ -1.38
RTTN-214ENST00000639128 RBM26Q5T8P6 1007 aaKnown RBP6.46□□□□□ -1.38
RTTN-214ENST00000639128 PPP4R3CPQ6ZMV5 832 aa6.46□□□□□ -1.38
RTTN-214ENST00000639128 RNF214Q8ND24 703 aa6.46□□□□□ -1.38
RTTN-214ENST00000639128 SMARCC1Q92922 1105 aaPredicted RBP6.46□□□□□ -1.38
RTTN-214ENST00000639128 LUC7L2Q9Y383 392 aaKnown RBP6.46□□□□□ -1.38
RTTN-214ENST00000639128 E9PSI1 815 aa6.45□□□□□ -1.38
RTTN-214ENST00000639128 GMNNO75496 209 aa6.45□□□□□ -1.38
RTTN-214ENST00000639128 MCM5P33992 734 aa6.45□□□□□ -1.38
RTTN-214ENST00000639128 FILIP1Q7Z7B0 1213 aa6.45□□□□□ -1.38
RTTN-214ENST00000639128 PLEKHG5O94827 1062 aa6.45□□□□□ -1.38
RTTN-214ENST00000639128 TXLNAP40222 546 aa6.45□□□□□ -1.38
RTTN-214ENST00000639128 SMARCE1Q969G3 411 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms