RNA–Protein interactions for RNA: ENST00000638755.1

PAX6-238, Transcript of paired box 6, human

TSL 5 BASIC

Gene PAX6, Length 1,161 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PAX6-238	ENST00000638755	AFF2	P51816	1311 aa		18.77	■□□□□ 0.6
PAX6-238	ENST00000638755	KDM5A	P29375	1690 aa	Known RBP	18.77	■□□□□ 0.6
PAX6-238	ENST00000638755	SHPRH	Q149N8	1683 aa		18.76	■□□□□ 0.59
PAX6-238	ENST00000638755	NUTM2D	Q5VT03	806 aa	Predicted RBP	18.75	■□□□□ 0.59
PAX6-238	ENST00000638755	RRP7BP	Q9NSQ0	103 aa		18.74	■□□□□ 0.59
PAX6-238	ENST00000638755	AHDC1	Q5TGY3	1603 aa	Predicted RBP	18.73	■□□□□ 0.59
PAX6-238	ENST00000638755	RGS12	O14924	1447 aa		18.73	■□□□□ 0.59
PAX6-238	ENST00000638755	KANK1	Q14678	1352 aa		18.72	■□□□□ 0.59
PAX6-238	ENST00000638755	KIF15	Q9NS87	1388 aa		18.72	■□□□□ 0.59
PAX6-238	ENST00000638755	ATF3	P18847	181 aa		18.72	■□□□□ 0.59
PAX6-238	ENST00000638755	CHD2	O14647	1828 aa	Known RBP	18.72	■□□□□ 0.59
PAX6-238	ENST00000638755	CADPS2	Q86UW7	1296 aa		18.71	■□□□□ 0.59
PAX6-238	ENST00000638755	QTRT2	Q9H974	415 aa	Known RBP	18.71	■□□□□ 0.59
PAX6-238	ENST00000638755	ADGRB3	O60242	1522 aa		18.7	■□□□□ 0.58
PAX6-238	ENST00000638755	PPP1R15A	O75807	674 aa	Predicted RBP	18.7	■□□□□ 0.58
PAX6-238	ENST00000638755	ERBIN	Q96RT1	1412 aa		18.69	■□□□□ 0.58
PAX6-238	ENST00000638755	RBM6	P78332	1123 aa	Known RBP	18.69	■□□□□ 0.58
PAX6-238	ENST00000638755	C8orf37	Q96NL8	207 aa		18.69	■□□□□ 0.58
PAX6-238	ENST00000638755	C19orf44	Q9H6X5	657 aa		18.69	■□□□□ 0.58
PAX6-238	ENST00000638755	NCOA3	Q9Y6Q9	1424 aa		18.68	■□□□□ 0.58
PAX6-238	ENST00000638755	BRINP3	Q76B58	766 aa		18.68	■□□□□ 0.58
PAX6-238	ENST00000638755	ZRANB1	Q9UGI0	708 aa		18.68	■□□□□ 0.58
PAX6-238	ENST00000638755	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	18.68	■□□□□ 0.58
PAX6-238	ENST00000638755	PLEKHG1	Q9ULL1	1385 aa		18.68	■□□□□ 0.58
PAX6-238	ENST00000638755	DIP2A	Q14689	1571 aa		18.67	■□□□□ 0.58
PAX6-238	ENST00000638755	MYOM3	Q5VTT5	1437 aa		18.66	■□□□□ 0.58
PAX6-238	ENST00000638755	SLC52A1	Q9NWF4	448 aa		18.65	■□□□□ 0.58
PAX6-238	ENST00000638755	NOS1	P29475	1434 aa		18.65	■□□□□ 0.58
PAX6-238	ENST00000638755	FOXD1	Q16676	465 aa		18.64	■□□□□ 0.57
PAX6-238	ENST00000638755	TBX22	Q9Y458	520 aa		18.64	■□□□□ 0.57
PAX6-238	ENST00000638755	HDGF	P51858	240 aa	Known RBP	18.63	■□□□□ 0.57
PAX6-238	ENST00000638755	ATAD2	Q6PL18	1390 aa		18.63	■□□□□ 0.57
PAX6-238	ENST00000638755	ZFYVE9	O95405	1425 aa		18.63	■□□□□ 0.57
PAX6-238	ENST00000638755	RIMS2	Q9UQ26	1411 aa		18.63	■□□□□ 0.57
PAX6-238	ENST00000638755	LMTK2	Q8IWU2	1503 aa		18.63	■□□□□ 0.57
PAX6-238	ENST00000638755	SETBP1	Q9Y6X0	1596 aa		18.61	■□□□□ 0.57
PAX6-238	ENST00000638755	MYO5B	Q9ULV0	1848 aa		18.6	■□□□□ 0.57
PAX6-238	ENST00000638755	NGLY1	Q96IV0	654 aa		18.6	■□□□□ 0.57
PAX6-238	ENST00000638755	SETD5	Q9C0A6	1442 aa		18.59	■□□□□ 0.57
PAX6-238	ENST00000638755	LRRC59	Q96AG4	307 aa	Known RBP	18.59	■□□□□ 0.57
PAX6-238	ENST00000638755	ASXL1	Q8IXJ9	1541 aa		18.59	■□□□□ 0.57
PAX6-238	ENST00000638755	ABCC5	O15440	1437 aa		18.58	■□□□□ 0.57
PAX6-238	ENST00000638755	ADAMTS2	O95450	1211 aa		18.58	■□□□□ 0.56
PAX6-238	ENST00000638755	KANK4	Q5T7N3	995 aa	Predicted RBP	18.58	■□□□□ 0.56
PAX6-238	ENST00000638755	CHGA	P10645	457 aa	Known RBP	18.57	■□□□□ 0.56
PAX6-238	ENST00000638755	DDX17	Q92841	729 aa	Known RBP	18.57	■□□□□ 0.56
PAX6-238	ENST00000638755	CROCC2	H7BZ55	1655 aa		18.57	■□□□□ 0.56
PAX6-238	ENST00000638755	CHIC2	Q9UKJ5	165 aa		18.56	■□□□□ 0.56
PAX6-238	ENST00000638755	GCC2	Q8IWJ2	1684 aa		18.56	■□□□□ 0.56
PAX6-238	ENST00000638755	ADAMTS13	Q76LX8	1427 aa		18.56	■□□□□ 0.56
PAX6-238	ENST00000638755	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	18.55	■□□□□ 0.56
PAX6-238	ENST00000638755	AMOTL2	Q9Y2J4	779 aa		18.55	■□□□□ 0.56
PAX6-238	ENST00000638755	PNPLA6	Q8IY17	1366 aa		18.55	■□□□□ 0.56
PAX6-238	ENST00000638755	USP21	Q9UK80	565 aa		18.52	■□□□□ 0.56
PAX6-238	ENST00000638755	PIK3R4	Q99570	1358 aa		18.52	■□□□□ 0.55
PAX6-238	ENST00000638755	TMEM131L	A2VDJ0	1609 aa		18.52	■□□□□ 0.55
PAX6-238	ENST00000638755	NHSL1	Q5SYE7	1610 aa		18.52	■□□□□ 0.55
PAX6-238	ENST00000638755	DAPK1	P53355	1430 aa		18.51	■□□□□ 0.55
PAX6-238	ENST00000638755	MST1R	Q04912	1400 aa		18.51	■□□□□ 0.55
PAX6-238	ENST00000638755	ANKRD30A	Q9BXX3	1397 aa		18.51	■□□□□ 0.55
PAX6-238	ENST00000638755	DCC	P43146	1447 aa		18.5	■□□□□ 0.55
PAX6-238	ENST00000638755	PTPRU	Q92729	1446 aa		18.5	■□□□□ 0.55
PAX6-238	ENST00000638755	EP400	Q96L91	3159 aa		18.5	■□□□□ 0.55
PAX6-238	ENST00000638755	TRPC5	Q9UL62	973 aa	Predicted RBP	18.49	■□□□□ 0.55
PAX6-238	ENST00000638755	RPRD2	Q5VT52	1461 aa	Known RBP	18.48	■□□□□ 0.55
PAX6-238	ENST00000638755	TRPM2	O94759	1503 aa		18.48	■□□□□ 0.55
PAX6-238	ENST00000638755	CCDC125	Q86Z20	511 aa		18.47	■□□□□ 0.55
PAX6-238	ENST00000638755	PTPN23	Q9H3S7	1636 aa		18.47	■□□□□ 0.55
PAX6-238	ENST00000638755	VPS8	Q8N3P4	1428 aa		18.43	■□□□□ 0.54
PAX6-238	ENST00000638755	ATRN	O75882	1429 aa		18.41	■□□□□ 0.54
PAX6-238	ENST00000638755	FNBP4	Q8N3X1	1017 aa	Predicted RBP	18.41	■□□□□ 0.54
PAX6-238	ENST00000638755	UNC13B	O14795	1591 aa		18.39	■□□□□ 0.53
PAX6-238	ENST00000638755	XRN1	Q8IZH2	1706 aa	Known RBP	18.39	■□□□□ 0.53
PAX6-238	ENST00000638755	PTCH1	Q13635	1447 aa		18.37	■□□□□ 0.53
PAX6-238	ENST00000638755	ADGRL3	Q9HAR2	1447 aa		18.37	■□□□□ 0.53
PAX6-238	ENST00000638755	DEFB132	Q7Z7B7	95 aa		18.36	■□□□□ 0.53
PAX6-238	ENST00000638755	C1orf167	Q5SNV9	1468 aa		18.35	■□□□□ 0.53
PAX6-238	ENST00000638755	ANKRD50	Q9ULJ7	1429 aa		18.35	■□□□□ 0.53
PAX6-238	ENST00000638755	MET	P08581	1390 aa		18.35	■□□□□ 0.53
PAX6-238	ENST00000638755	ORAI2	Q96SN7	254 aa		18.35	■□□□□ 0.53
PAX6-238	ENST00000638755	BLM	P54132	1417 aa	Predicted RBP	18.34	■□□□□ 0.53
PAX6-238	ENST00000638755	SOS2	Q07890	1332 aa	Predicted RBP	18.34	■□□□□ 0.53
PAX6-238	ENST00000638755	GJD4	Q96KN9	370 aa	Predicted RBP	18.34	■□□□□ 0.53
PAX6-238	ENST00000638755	NALCN	Q8IZF0	1738 aa		18.33	■□□□□ 0.52
PAX6-238	ENST00000638755	NRXN3	Q9Y4C0	1643 aa		18.33	■□□□□ 0.52
PAX6-238	ENST00000638755	BCL9L	Q86UU0	1499 aa		18.33	■□□□□ 0.52
PAX6-238	ENST00000638755	LRP5	O75197	1615 aa		18.32	■□□□□ 0.52
PAX6-238	ENST00000638755	SF3B2	Q13435	895 aa	Known RBP	18.31	■□□□□ 0.52
PAX6-238	ENST00000638755	ADGRL2	O95490	1459 aa		18.31	■□□□□ 0.52
PAX6-238	ENST00000638755		E9PCH4	1651 aa		18.31	■□□□□ 0.52
PAX6-238	ENST00000638755	PSD	A5PKW4	1024 aa	Predicted RBP	18.29	■□□□□ 0.52
PAX6-238	ENST00000638755	ZNF326	Q5BKZ1	582 aa	Known RBP	18.29	■□□□□ 0.52
PAX6-238	ENST00000638755	LAMC1	P11047	1609 aa		18.29	■□□□□ 0.52
PAX6-238	ENST00000638755	FAM50A	Q14320	339 aa	Known RBP	18.27	■□□□□ 0.52
PAX6-238	ENST00000638755	COL22A1	Q8NFW1	1626 aa	Predicted RBP	18.27	■□□□□ 0.51
PAX6-238	ENST00000638755	APLP2	Q06481	763 aa		18.26	■□□□□ 0.51
PAX6-238	ENST00000638755	MYOM2	P54296	1465 aa		18.26	■□□□□ 0.51
PAX6-238	ENST00000638755	HRC	P23327	699 aa		18.24	■□□□□ 0.51
PAX6-238	ENST00000638755	RALGAPB	Q86X10	1494 aa		18.24	■□□□□ 0.51
PAX6-238	ENST00000638755	XPC	Q01831	940 aa	Predicted RBP	18.23	■□□□□ 0.51

Retrieved 100 of 20,778 RNA–protein pairs in 86 ms