RNA–Protein interactions for RNA: ENST00000638725.1

SNIP1-204, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 2

Gene SNIP1, Length 2,761 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-204ENST00000638725 MADDQ8WXG6 1647 aa14.25□□□□□ -0.13
SNIP1-204ENST00000638725 NFKBIBQ15653 356 aa14.25□□□□□ -0.13
SNIP1-204ENST00000638725 CCDC146Q8IYE0 955 aa14.25□□□□□ -0.13
SNIP1-204ENST00000638725 IQGAP1P46940 1657 aa14.25□□□□□ -0.13
SNIP1-204ENST00000638725 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.25□□□□□ -0.13
SNIP1-204ENST00000638725 SLFN5Q08AF3 891 aa14.24□□□□□ -0.13
SNIP1-204ENST00000638725 RGS3P49796 1198 aa14.24□□□□□ -0.13
SNIP1-204ENST00000638725 SYNMO15061 1565 aa14.23□□□□□ -0.13
SNIP1-204ENST00000638725 CLASP1Q7Z460 1538 aa14.23□□□□□ -0.13
SNIP1-204ENST00000638725 ASXL1Q8IXJ9 1541 aa14.23□□□□□ -0.13
SNIP1-204ENST00000638725 SPINK5Q9NQ38 1064 aaPredicted RBP14.23□□□□□ -0.13
SNIP1-204ENST00000638725 DAXXQ9UER7 740 aaPredicted RBP14.23□□□□□ -0.13
SNIP1-204ENST00000638725 PIK3C2GO75747 1445 aa14.22□□□□□ -0.13
SNIP1-204ENST00000638725 SCAF11Q99590 1463 aaKnown RBP14.21□□□□□ -0.13
SNIP1-204ENST00000638725 CDCA8Q53HL2 280 aa14.21□□□□□ -0.13
SNIP1-204ENST00000638725 ANO8Q9HCE9 1232 aaPredicted RBP14.21□□□□□ -0.13
SNIP1-204ENST00000638725 APAF1O14727 1248 aa14.21□□□□□ -0.14
SNIP1-204ENST00000638725 GSE1Q14687 1217 aa14.21□□□□□ -0.14
SNIP1-204ENST00000638725 MYOM1P52179 1685 aa14.2□□□□□ -0.14
SNIP1-204ENST00000638725 TRMT2AQ8IZ69 625 aaKnown RBP14.2□□□□□ -0.14
SNIP1-204ENST00000638725 BCAR3O75815 825 aa14.2□□□□□ -0.14
SNIP1-204ENST00000638725 SPHKAPQ2M3C7 1700 aa14.19□□□□□ -0.14
SNIP1-204ENST00000638725 NKTRP30414 1462 aaKnown RBP14.18□□□□□ -0.14
SNIP1-204ENST00000638725 TRAPPC8Q9Y2L5 1435 aa14.18□□□□□ -0.14
SNIP1-204ENST00000638725 ABCC2Q92887 1545 aa14.17□□□□□ -0.14
SNIP1-204ENST00000638725 EIF3AQ14152 1382 aaKnown RBP14.17□□□□□ -0.14
SNIP1-204ENST00000638725 BRPF3Q9ULD4 1205 aa14.17□□□□□ -0.14
SNIP1-204ENST00000638725 TRPM2O94759 1503 aa14.17□□□□□ -0.14
SNIP1-204ENST00000638725 SCAPERQ9BY12 1400 aa14.17□□□□□ -0.14
SNIP1-204ENST00000638725 FRAT1Q92837 279 aaPredicted RBP14.17□□□□□ -0.14
SNIP1-204ENST00000638725 DMRT2Q9Y5R5 561 aa14.17□□□□□ -0.14
SNIP1-204ENST00000638725 NPC1L1Q9UHC9 1359 aa14.17□□□□□ -0.14
SNIP1-204ENST00000638725 CLTCL1P53675 1640 aa14.16□□□□□ -0.14
SNIP1-204ENST00000638725 PLCH2O75038 1416 aa14.16□□□□□ -0.14
SNIP1-204ENST00000638725 CEP152O94986 1710 aa14.15□□□□□ -0.14
SNIP1-204ENST00000638725 EFCAB2Q5VUJ9 269 aa14.15□□□□□ -0.14
SNIP1-204ENST00000638725 ERCC6L2Q5T890 1561 aa14.15□□□□□ -0.14
SNIP1-204ENST00000638725 ABCC1P33527 1531 aa14.15□□□□□ -0.14
SNIP1-204ENST00000638725 IGHDP01880 384 aa14.15□□□□□ -0.14
SNIP1-204ENST00000638725 E9PSI1 815 aa14.14□□□□□ -0.15
SNIP1-204ENST00000638725 KDM5AP29375 1690 aaKnown RBP14.14□□□□□ -0.15
SNIP1-204ENST00000638725 FRAT2O75474 233 aaPredicted RBP14.14□□□□□ -0.15
SNIP1-204ENST00000638725 CHD1O14646 1710 aa14.13□□□□□ -0.15
SNIP1-204ENST00000638725 PTPRTO14522 1441 aa14.13□□□□□ -0.15
SNIP1-204ENST00000638725 SPAG9O60271 1321 aaKnown RBP14.12□□□□□ -0.15
SNIP1-204ENST00000638725 AFAP1Q8N556 730 aa14.11□□□□□ -0.15
SNIP1-204ENST00000638725 STAC3Q96MF2 364 aa14.11□□□□□ -0.15
SNIP1-204ENST00000638725 SHROOM2Q13796 1616 aa14.11□□□□□ -0.15
SNIP1-204ENST00000638725 CFAP70Q5T0N1 1121 aa14.11□□□□□ -0.15
SNIP1-204ENST00000638725 CARD14Q9BXL6 1004 aa14.11□□□□□ -0.15
SNIP1-204ENST00000638725 ERVK-7P63135 1459 aa14.11□□□□□ -0.15
SNIP1-204ENST00000638725 USP19O94966 1318 aa14.1□□□□□ -0.15
SNIP1-204ENST00000638725 PANK1Q8TE04 598 aa14.1□□□□□ -0.15
SNIP1-204ENST00000638725 COG6Q9Y2V7 657 aa14.1□□□□□ -0.15
SNIP1-204ENST00000638725 CGNL1Q0VF96 1302 aa14.09□□□□□ -0.15
SNIP1-204ENST00000638725 CENPJQ9HC77 1338 aaPredicted RBP14.09□□□□□ -0.15
SNIP1-204ENST00000638725 VIRMAQ69YN4 1812 aaKnown RBP14.09□□□□□ -0.15
SNIP1-204ENST00000638725 ZFYVE16Q7Z3T8 1539 aa14.09□□□□□ -0.15
SNIP1-204ENST00000638725 SEC24BO95487 1268 aa14.08□□□□□ -0.16
SNIP1-204ENST00000638725 CANXP27824 592 aaKnown RBP14.08□□□□□ -0.16
SNIP1-204ENST00000638725 PDE3AQ14432 1141 aa14.08□□□□□ -0.16
SNIP1-204ENST00000638725 CLUAP1Q96AJ1 413 aa14.08□□□□□ -0.16
SNIP1-204ENST00000638725 WWC1Q8IX03 1113 aa14.08□□□□□ -0.16
SNIP1-204ENST00000638725 ZCCHC11Q5TAX3 1644 aaKnown RBP14.08□□□□□ -0.16
SNIP1-204ENST00000638725 KIAA1210Q9ULL0 1709 aa14.08□□□□□ -0.16
SNIP1-204ENST00000638725 TET3O43151 1660 aa14.07□□□□□ -0.16
SNIP1-204ENST00000638725 ADGRF5Q8IZF2 1346 aa14.07□□□□□ -0.16
SNIP1-204ENST00000638725 PRKCSHP14314 528 aaPredicted RBP14.07□□□□□ -0.16
SNIP1-204ENST00000638725 DEPDC5O75140 1603 aa14.07□□□□□ -0.16
SNIP1-204ENST00000638725 ABCA6Q8N139 1617 aa14.07□□□□□ -0.16
SNIP1-204ENST00000638725 RTEL1-TNFRSF6BF6WH68 1400 aa14.06□□□□□ -0.16
SNIP1-204ENST00000638725 UGGT1Q9NYU2 1555 aa14.06□□□□□ -0.16
SNIP1-204ENST00000638725 NEUROD2Q15784 382 aa14.06□□□□□ -0.16
SNIP1-204ENST00000638725 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.06□□□□□ -0.16
SNIP1-204ENST00000638725 NGEFQ8N5V2 710 aa14.05□□□□□ -0.16
SNIP1-204ENST00000638725 MAP3K4Q9Y6R4 1608 aa14.05□□□□□ -0.16
SNIP1-204ENST00000638725 MAPK8IP3Q9UPT6 1336 aa14.05□□□□□ -0.16
SNIP1-204ENST00000638725 POLR3AO14802 1390 aaPredicted RBP14.05□□□□□ -0.16
SNIP1-204ENST00000638725 NINLQ9Y2I6 1382 aa14.05□□□□□ -0.16
SNIP1-204ENST00000638725 RRP7AQ9Y3A4 280 aaKnown RBP14.05□□□□□ -0.16
SNIP1-204ENST00000638725 KANK1Q14678 1352 aa14.04□□□□□ -0.16
SNIP1-204ENST00000638725 KIF3BO15066 747 aa14.04□□□□□ -0.16
SNIP1-204ENST00000638725 TNNT2P45379 298 aaPredicted RBP14.03□□□□□ -0.16
SNIP1-204ENST00000638725 TNNQ9UQP3 1299 aa14.03□□□□□ -0.16
SNIP1-204ENST00000638725 MYOM2P54296 1465 aa14.02□□□□□ -0.16
SNIP1-204ENST00000638725 VWDEQ8N2E2 1590 aa14.02□□□□□ -0.16
SNIP1-204ENST00000638725 NLRP1Q9C000 1473 aa14.02□□□□□ -0.17
SNIP1-204ENST00000638725 SLC24A1O60721 1099 aa14.02□□□□□ -0.17
SNIP1-204ENST00000638725 RARSP54136 660 aaKnown RBP14.02□□□□□ -0.17
SNIP1-204ENST00000638725 SHPRHQ149N8 1683 aa14.01□□□□□ -0.17
SNIP1-204ENST00000638725 SLKQ9H2G2 1235 aaPredicted RBP14.01□□□□□ -0.17
SNIP1-204ENST00000638725 NSD3Q9BZ95 1437 aa14.01□□□□□ -0.17
SNIP1-204ENST00000638725 RLBP1P12271 317 aa14.01□□□□□ -0.17
SNIP1-204ENST00000638725 BCL2L13Q9BXK5 485 aa14.01□□□□□ -0.17
SNIP1-204ENST00000638725 MORC1Q86VD1 984 aa14□□□□□ -0.17
SNIP1-204ENST00000638725 PCDHB15Q9Y5E8 787 aa14□□□□□ -0.17
SNIP1-204ENST00000638725 ATP7AQ04656 1500 aa14□□□□□ -0.17
SNIP1-204ENST00000638725 TCP11L2Q8N4U5 519 aa14□□□□□ -0.17
SNIP1-204ENST00000638725 NEURL4Q96JN8 1562 aa14□□□□□ -0.17
SNIP1-204ENST00000638725 BECN1Q14457 450 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms