RNA–Protein interactions for RNA: ENST00000638685.1

PAX6-236, Transcript of paired box 6, humanhuman

TSL 5 BASIC

Gene PAX6, Length 2,372 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-236ENST00000638685 ARID4BQ4LE39 1312 aaPredicted RBP14.14□□□□□ -0.15
PAX6-236ENST00000638685 FKBP8Q14318 412 aa14.14□□□□□ -0.15
PAX6-236ENST00000638685 PIK3C2BO00750 1634 aa14.13□□□□□ -0.15
PAX6-236ENST00000638685 PPLO60437 1756 aa14.13□□□□□ -0.15
PAX6-236ENST00000638685 ZC3H13Q5T200 1668 aaKnown RBP14.12□□□□□ -0.15
PAX6-236ENST00000638685 MYOM2P54296 1465 aa14.12□□□□□ -0.15
PAX6-236ENST00000638685 MYO5BQ9ULV0 1848 aa14.12□□□□□ -0.15
PAX6-236ENST00000638685 HNRNPUQ00839 825 aaKnown RBP eCLIP14.11□□□□□ -0.15
PAX6-236ENST00000638685 FBXO31Q5XUX0 539 aaPredicted RBP14.11□□□□□ -0.15
PAX6-236ENST00000638685 NUTM2DQ5VT03 806 aaPredicted RBP14.11□□□□□ -0.15
PAX6-236ENST00000638685 ARHGAP31Q2M1Z3 1444 aa14.11□□□□□ -0.15
PAX6-236ENST00000638685 KIAA1210Q9ULL0 1709 aa14.11□□□□□ -0.15
PAX6-236ENST00000638685 IDI1Q13907 227 aa14.1□□□□□ -0.15
PAX6-236ENST00000638685 NRXN1Q9ULB1 1477 aa14.1□□□□□ -0.15
PAX6-236ENST00000638685 PREX1Q8TCU6 1659 aa14.1□□□□□ -0.15
PAX6-236ENST00000638685 STAC3Q96MF2 364 aa14.09□□□□□ -0.15
PAX6-236ENST00000638685 SCAF11Q99590 1463 aaKnown RBP14.09□□□□□ -0.15
PAX6-236ENST00000638685 MLECQ14165 292 aa14.09□□□□□ -0.15
PAX6-236ENST00000638685 REREQ9P2R6 1566 aa14.08□□□□□ -0.15
PAX6-236ENST00000638685 SENP3Q9H4L4 574 aaPredicted RBP14.07□□□□□ -0.16
PAX6-236ENST00000638685 CLTCQ00610 1675 aaKnown RBP14.07□□□□□ -0.16
PAX6-236ENST00000638685 AGLP35573 1532 aa14.07□□□□□ -0.16
PAX6-236ENST00000638685 ARHGEF40Q8TER5 1519 aa14.07□□□□□ -0.16
PAX6-236ENST00000638685 MRS2Q9HD23 443 aa14.06□□□□□ -0.16
PAX6-236ENST00000638685 PIK3C2GO75747 1445 aa14.06□□□□□ -0.16
PAX6-236ENST00000638685 PER1O15534 1290 aaPredicted RBP14.05□□□□□ -0.16
PAX6-236ENST00000638685 NEXMIFQ5QGS0 1516 aa14.05□□□□□ -0.16
PAX6-236ENST00000638685 TMF1P82094 1093 aa14.04□□□□□ -0.16
PAX6-236ENST00000638685 TMEM132EQ6IEE7 984 aa14.04□□□□□ -0.16
PAX6-236ENST00000638685 FAM9BQ8IZU0 186 aa14.04□□□□□ -0.16
PAX6-236ENST00000638685 TMEM131LA2VDJ0 1609 aa14.03□□□□□ -0.16
PAX6-236ENST00000638685 ADGRB1O14514 1584 aa14.02□□□□□ -0.16
PAX6-236ENST00000638685 ERVK-7P63135 1459 aa14.02□□□□□ -0.16
PAX6-236ENST00000638685 BCANQ96GW7 911 aa14.02□□□□□ -0.16
PAX6-236ENST00000638685 PANK3Q9H999 370 aa14.02□□□□□ -0.16
PAX6-236ENST00000638685 C14orf93Q9H972 538 aaKnown RBP14.02□□□□□ -0.17
PAX6-236ENST00000638685 SLC52A1Q9NWF4 448 aa14.01□□□□□ -0.17
PAX6-236ENST00000638685 ERICH6BQ5W0A0 696 aa14.01□□□□□ -0.17
PAX6-236ENST00000638685 TSHZ2Q9NRE2 1034 aa14.01□□□□□ -0.17
PAX6-236ENST00000638685 TRAK1Q9UPV9 953 aa14□□□□□ -0.17
PAX6-236ENST00000638685 MYOM1P52179 1685 aa14□□□□□ -0.17
PAX6-236ENST00000638685 RPGRIP1LQ68CZ1 1315 aa14□□□□□ -0.17
PAX6-236ENST00000638685 ZBED9Q6R2W3 1325 aa14□□□□□ -0.17
PAX6-236ENST00000638685 SETBP1Q9Y6X0 1596 aa13.99□□□□□ -0.17
PAX6-236ENST00000638685 MYT1Q01538 1121 aa13.99□□□□□ -0.17
PAX6-236ENST00000638685 MYO3AQ8NEV4 1616 aa13.98□□□□□ -0.17
PAX6-236ENST00000638685 EIF3AQ14152 1382 aaKnown RBP13.97□□□□□ -0.17
PAX6-236ENST00000638685 CC2D1BQ5T0F9 858 aaKnown RBP13.97□□□□□ -0.17
PAX6-236ENST00000638685 KTN1Q86UP2 1357 aaKnown RBP13.97□□□□□ -0.17
PAX6-236ENST00000638685 SENP3-EIF4A1A0A087X0R7 540 aa13.96□□□□□ -0.17
PAX6-236ENST00000638685 SPATA31D1Q6ZQQ2 1576 aa13.96□□□□□ -0.17
PAX6-236ENST00000638685 ASXL1Q8IXJ9 1541 aa13.96□□□□□ -0.17
PAX6-236ENST00000638685 PARD3Q8TEW0 1356 aa13.96□□□□□ -0.17
PAX6-236ENST00000638685 VGFO15240 615 aaPredicted RBP13.96□□□□□ -0.18
PAX6-236ENST00000638685 PPP6R1Q9UPN7 881 aa13.96□□□□□ -0.18
PAX6-236ENST00000638685 KDM5AP29375 1690 aaKnown RBP13.95□□□□□ -0.18
PAX6-236ENST00000638685 ZMYM3Q14202 1370 aa13.94□□□□□ -0.18
PAX6-236ENST00000638685 QRICH2Q9H0J4 1663 aa13.94□□□□□ -0.18
PAX6-236ENST00000638685 MYBBP1AQ9BQG0 1328 aaKnown RBP13.94□□□□□ -0.18
PAX6-236ENST00000638685 CENPJQ9HC77 1338 aaPredicted RBP13.94□□□□□ -0.18
PAX6-236ENST00000638685 ARHGEF28Q8N1W1 1705 aaKnown RBP13.94□□□□□ -0.18
PAX6-236ENST00000638685 TRHP20396 242 aaPredicted RBP13.93□□□□□ -0.18
PAX6-236ENST00000638685 RALBP1Q15311 655 aa13.93□□□□□ -0.18
PAX6-236ENST00000638685 PNISRQ8TF01 805 aaKnown RBP13.93□□□□□ -0.18
PAX6-236ENST00000638685 ZFYVE9O95405 1425 aa13.93□□□□□ -0.18
PAX6-236ENST00000638685 A2ML1A8K2U0 1454 aa13.92□□□□□ -0.18
PAX6-236ENST00000638685 TMC1Q8TDI8 760 aa13.91□□□□□ -0.18
PAX6-236ENST00000638685 SBNO2Q9Y2G9 1366 aa13.91□□□□□ -0.18
PAX6-236ENST00000638685 AMER1Q5JTC6 1135 aaPredicted RBP13.9□□□□□ -0.18
PAX6-236ENST00000638685 STAG3Q9UJ98 1225 aa13.9□□□□□ -0.18
PAX6-236ENST00000638685 SAFB2Q14151 953 aaKnown RBP eCLIP13.9□□□□□ -0.18
PAX6-236ENST00000638685 STK26Q9P289 416 aa13.9□□□□□ -0.18
PAX6-236ENST00000638685 BRD4O60885 1362 aaPredicted RBP13.89□□□□□ -0.19
PAX6-236ENST00000638685 CDCA8Q53HL2 280 aa13.89□□□□□ -0.19
PAX6-236ENST00000638685 CARD14Q9BXL6 1004 aa13.88□□□□□ -0.19
PAX6-236ENST00000638685 ALKQ9UM73 1620 aa13.88□□□□□ -0.19
PAX6-236ENST00000638685 CEBPAP49715 358 aaPredicted RBP13.88□□□□□ -0.19
PAX6-236ENST00000638685 ESF1Q9H501 851 aaKnown RBP13.88□□□□□ -0.19
PAX6-236ENST00000638685 NLRP13Q86W25 1043 aa13.87□□□□□ -0.19
PAX6-236ENST00000638685 KNSTRNQ9Y448 316 aa13.87□□□□□ -0.19
PAX6-236ENST00000638685 PTPRMP28827 1452 aa13.87□□□□□ -0.19
PAX6-236ENST00000638685 TULP4Q9NRJ4 1543 aa13.87□□□□□ -0.19
PAX6-236ENST00000638685 LRPPRCP42704 1394 aaKnown RBP13.87□□□□□ -0.19
PAX6-236ENST00000638685 PPP4R2Q9NY27 417 aa13.87□□□□□ -0.19
PAX6-236ENST00000638685 RIMS2Q9UQ26 1411 aa13.86□□□□□ -0.19
PAX6-236ENST00000638685 SMG6Q86US8 1419 aaKnown RBP13.86□□□□□ -0.19
PAX6-236ENST00000638685 SETD1AO15047 1707 aaKnown RBP13.86□□□□□ -0.19
PAX6-236ENST00000638685 SLC12A5Q9H2X9 1139 aa13.86□□□□□ -0.19
PAX6-236ENST00000638685 NRXN3Q9Y4C0 1643 aa13.84□□□□□ -0.19
PAX6-236ENST00000638685 YTHDC2Q9H6S0 1430 aaKnown RBP13.84□□□□□ -0.19
PAX6-236ENST00000638685 TNRQ92752 1358 aa13.83□□□□□ -0.19
PAX6-236ENST00000638685 PLPPR3Q6T4P5 718 aa13.83□□□□□ -0.2
PAX6-236ENST00000638685 IRX6P78412 446 aaPredicted RBP13.82□□□□□ -0.2
PAX6-236ENST00000638685 CABP2Q9NPB3 220 aa13.82□□□□□ -0.2
PAX6-236ENST00000638685 UBR1Q8IWV7 1749 aa13.82□□□□□ -0.2
PAX6-236ENST00000638685 PPP2R1AP30153 589 aa13.82□□□□□ -0.2
PAX6-236ENST00000638685 PRAM1Q96QH2 718 aa13.82□□□□□ -0.2
PAX6-236ENST00000638685 SLC24A1O60721 1099 aa13.81□□□□□ -0.2
PAX6-236ENST00000638685 NUDCQ9Y266 331 aa13.81□□□□□ -0.2
PAX6-236ENST00000638685 C3P01024 1663 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms