RNA–Protein interactions for RNA: ENST00000638488.1

GFAP-228, Transcript of glial fibrillary acidic protein, humanhuman

TSL 5

Gene GFAP, Length 2,641 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-228ENST00000638488 MAGI2Q86UL8 1455 aa15.76■□□□□ 0.11
GFAP-228ENST00000638488 RTEL1-TNFRSF6BF6WH68 1400 aa15.75■□□□□ 0.11
GFAP-228ENST00000638488 ATP7AQ04656 1500 aa15.75■□□□□ 0.11
GFAP-228ENST00000638488 ABCA9Q8IUA7 1624 aa15.75■□□□□ 0.11
GFAP-228ENST00000638488 ARAP3Q8WWN8 1544 aa15.74■□□□□ 0.11
GFAP-228ENST00000638488 TRPM1Q7Z4N2 1603 aa15.74■□□□□ 0.11
GFAP-228ENST00000638488 RCAN3Q9UKA8 241 aa15.74■□□□□ 0.11
GFAP-228ENST00000638488 ARID4BQ4LE39 1312 aaPredicted RBP15.74■□□□□ 0.11
GFAP-228ENST00000638488 SLC4A3P48751 1232 aa15.74■□□□□ 0.11
GFAP-228ENST00000638488 CENPJQ9HC77 1338 aaPredicted RBP15.74■□□□□ 0.11
GFAP-228ENST00000638488 PNISRQ8TF01 805 aaKnown RBP15.73■□□□□ 0.11
GFAP-228ENST00000638488 LRPPRCP42704 1394 aaKnown RBP15.73■□□□□ 0.11
GFAP-228ENST00000638488 KANK1Q14678 1352 aa15.72■□□□□ 0.11
GFAP-228ENST00000638488 E9PCH4 1651 aa15.72■□□□□ 0.11
GFAP-228ENST00000638488 PDE3BQ13370 1112 aa15.7■□□□□ 0.1
GFAP-228ENST00000638488 TMC1Q8TDI8 760 aa15.69■□□□□ 0.1
GFAP-228ENST00000638488 ATP10AO60312 1499 aa15.69■□□□□ 0.1
GFAP-228ENST00000638488 FAM161AQ3B820 660 aa15.69■□□□□ 0.1
GFAP-228ENST00000638488 INO80Q9ULG1 1556 aaPredicted RBP15.69■□□□□ 0.1
GFAP-228ENST00000638488 POGKQ9P215 609 aa15.68■□□□□ 0.1
GFAP-228ENST00000638488 CD109Q6YHK3 1445 aa15.68■□□□□ 0.1
GFAP-228ENST00000638488 KTN1Q86UP2 1357 aaKnown RBP15.67■□□□□ 0.1
GFAP-228ENST00000638488 DISP3Q9P2K9 1392 aa15.66■□□□□ 0.1
GFAP-228ENST00000638488 CALD1Q05682 793 aaKnown RBP15.66■□□□□ 0.1
GFAP-228ENST00000638488 GGT6Q6P531 493 aa15.66■□□□□ 0.1
GFAP-228ENST00000638488 GPRASP1Q5JY77 1395 aa15.65■□□□□ 0.1
GFAP-228ENST00000638488 CHGAP10645 457 aaKnown RBP15.64■□□□□ 0.1
GFAP-228ENST00000638488 C8orf34Q49A92 452 aa15.64■□□□□ 0.1
GFAP-228ENST00000638488 TESK2Q96S53 571 aa15.64■□□□□ 0.1
GFAP-228ENST00000638488 EIF2AK4Q9P2K8 1649 aaKnown RBP15.64■□□□□ 0.09
GFAP-228ENST00000638488 KDM2BQ8NHM5 1336 aa15.64■□□□□ 0.09
GFAP-228ENST00000638488 VIRMAQ69YN4 1812 aaKnown RBP15.64■□□□□ 0.09
GFAP-228ENST00000638488 SPHKAPQ2M3C7 1700 aa15.64■□□□□ 0.09
GFAP-228ENST00000638488 CLTCL1P53675 1640 aa15.64■□□□□ 0.09
GFAP-228ENST00000638488 PDCL3Q9H2J4 239 aa15.64■□□□□ 0.09
GFAP-228ENST00000638488 TRPM2O94759 1503 aa15.64■□□□□ 0.09
GFAP-228ENST00000638488 BRD4O60885 1362 aaPredicted RBP15.64■□□□□ 0.09
GFAP-228ENST00000638488 TMF1P82094 1093 aa15.64■□□□□ 0.09
GFAP-228ENST00000638488 PRDM15P57071 1507 aaPredicted RBP15.63■□□□□ 0.09
GFAP-228ENST00000638488 DEPDC5O75140 1603 aa15.63■□□□□ 0.09
GFAP-228ENST00000638488 TPM2P07951 284 aa15.63■□□□□ 0.09
GFAP-228ENST00000638488 CC2D1BQ5T0F9 858 aaKnown RBP15.63■□□□□ 0.09
GFAP-228ENST00000638488 UGGT1Q9NYU2 1555 aa15.63■□□□□ 0.09
GFAP-228ENST00000638488 ZNF518AQ6AHZ1 1483 aa15.63■□□□□ 0.09
GFAP-228ENST00000638488 TET3O43151 1660 aa15.62■□□□□ 0.09
GFAP-228ENST00000638488 RAPGEF3O95398 923 aa15.62■□□□□ 0.09
GFAP-228ENST00000638488 KIDINS220Q9ULH0 1771 aa15.62■□□□□ 0.09
GFAP-228ENST00000638488 FSD2A1L4K1 749 aa15.62■□□□□ 0.09
GFAP-228ENST00000638488 CENPQQ7L2Z9 268 aaPredicted RBP15.62■□□□□ 0.09
GFAP-228ENST00000638488 PTPRTO14522 1441 aa15.61■□□□□ 0.09
GFAP-228ENST00000638488 CYB5RLQ6IPT4 315 aa15.61■□□□□ 0.09
GFAP-228ENST00000638488 MYBBP1AQ9BQG0 1328 aaKnown RBP15.61■□□□□ 0.09
GFAP-228ENST00000638488 PANK3Q9H999 370 aa15.61■□□□□ 0.09
GFAP-228ENST00000638488 COL17A1Q9UMD9 1497 aaPredicted RBP15.6■□□□□ 0.09
GFAP-228ENST00000638488 GOLGA6L3A6NEY3 463 aa15.6■□□□□ 0.09
GFAP-228ENST00000638488 XRCC6P12956 609 aaKnown RBP eCLIP15.6■□□□□ 0.09
GFAP-228ENST00000638488 CEP152O94986 1710 aa15.6■□□□□ 0.09
GFAP-228ENST00000638488 RBM10P98175 930 aaKnown RBP15.59■□□□□ 0.09
GFAP-228ENST00000638488 RALBP1Q15311 655 aa15.59■□□□□ 0.09
GFAP-228ENST00000638488 MROH1Q8NDA8 1641 aa15.58■□□□□ 0.09
GFAP-228ENST00000638488 MADDQ8WXG6 1647 aa15.58■□□□□ 0.09
GFAP-228ENST00000638488 AAMPQ13685 434 aa15.58■□□□□ 0.08
GFAP-228ENST00000638488 VWDEQ8N2E2 1590 aa15.57■□□□□ 0.08
GFAP-228ENST00000638488 CFAP70Q5T0N1 1121 aa15.57■□□□□ 0.08
GFAP-228ENST00000638488 CRBNQ96SW2 442 aa15.57■□□□□ 0.08
GFAP-228ENST00000638488 LAMC1P11047 1609 aa15.57■□□□□ 0.08
GFAP-228ENST00000638488 POGZQ7Z3K3 1410 aa15.57■□□□□ 0.08
GFAP-228ENST00000638488 PRDM4Q9UKN5 801 aa15.57■□□□□ 0.08
GFAP-228ENST00000638488 CFAP65Q6ZU64 1925 aaKnown RBP15.56■□□□□ 0.08
GFAP-228ENST00000638488 PER1O15534 1290 aaPredicted RBP15.56■□□□□ 0.08
GFAP-228ENST00000638488 SKAP1Q86WV1 359 aa15.56■□□□□ 0.08
GFAP-228ENST00000638488 ZMYM4Q5VZL5 1548 aa15.56■□□□□ 0.08
GFAP-228ENST00000638488 ADGRF5Q8IZF2 1346 aa15.55■□□□□ 0.08
GFAP-228ENST00000638488 BECN1Q14457 450 aa15.55■□□□□ 0.08
GFAP-228ENST00000638488 INSRP06213 1382 aa15.55■□□□□ 0.08
GFAP-228ENST00000638488 RNF17Q9BXT8 1623 aaKnown RBP15.55■□□□□ 0.08
GFAP-228ENST00000638488 PPRC1Q5VV67 1664 aaKnown RBP15.54■□□□□ 0.08
GFAP-228ENST00000638488 SENP3Q9H4L4 574 aaPredicted RBP15.53■□□□□ 0.08
GFAP-228ENST00000638488 EFCAB6Q5THR3 1501 aa15.53■□□□□ 0.08
GFAP-228ENST00000638488 CFAP74Q9C0B2 1584 aa15.53■□□□□ 0.08
GFAP-228ENST00000638488 NLRP13Q86W25 1043 aa15.53■□□□□ 0.08
GFAP-228ENST00000638488 ESPNB1AK53 854 aa15.52■□□□□ 0.08
GFAP-228ENST00000638488 MRE11P49959 708 aa15.52■□□□□ 0.07
GFAP-228ENST00000638488 FGD1P98174 961 aa15.52■□□□□ 0.07
GFAP-228ENST00000638488 ISY1Q9ULR0 285 aaKnown RBP15.52■□□□□ 0.07
GFAP-228ENST00000638488 SCAF11Q99590 1463 aaKnown RBP15.52■□□□□ 0.07
GFAP-228ENST00000638488 HECW2Q9P2P5 1572 aa15.52■□□□□ 0.07
GFAP-228ENST00000638488 PARD3Q8TEW0 1356 aa15.51■□□□□ 0.07
GFAP-228ENST00000638488 NUTM2DQ5VT03 806 aaPredicted RBP15.5■□□□□ 0.07
GFAP-228ENST00000638488 FRMPD1Q5SYB0 1578 aa15.5■□□□□ 0.07
GFAP-228ENST00000638488 ANTXR1Q9H6X2 564 aa15.5■□□□□ 0.07
GFAP-228ENST00000638488 MLH3Q9UHC1 1453 aa15.5■□□□□ 0.07
GFAP-228ENST00000638488 STAC3Q96MF2 364 aa15.49■□□□□ 0.07
GFAP-228ENST00000638488 KNSTRNQ9Y448 316 aa15.49■□□□□ 0.07
GFAP-228ENST00000638488 KIF1BO60333 1816 aa15.49■□□□□ 0.07
GFAP-228ENST00000638488 IQGAP1P46940 1657 aa15.49■□□□□ 0.07
GFAP-228ENST00000638488 NPATQ14207 1427 aa15.49■□□□□ 0.07
GFAP-228ENST00000638488 ABCA6Q8N139 1617 aa15.49■□□□□ 0.07
GFAP-228ENST00000638488 PANK2Q9BZ23 570 aa15.48■□□□□ 0.07
GFAP-228ENST00000638488 MROH2AA6NES4 1674 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms